RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 DHX37Q8IY37 1157 aaKnown RBP12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 C1QTNF1Q9BXJ1 281 aa12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 BACH2Q9BYV9 841 aa12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 FTOQ9C0B1 505 aaKnown RBP eCLIP12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 PDRG1Q9NUG6 133 aa12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 ARIH1Q9Y4X5 557 aaPredicted RBP12.7□□□□□ -0.38
TMEM39A-211ENST00000491685 PNMA6FA0A0J9YX94 578 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 GCOM1H8Y6P7 765 aaPredicted RBP12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 PLEKHA8P1O95397 391 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 POLR2MP0CAP2 368 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 CKBP12277 381 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 ACTN1P12814 892 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 SELPP16109 830 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 RXRAP19793 462 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 RPS6KB1P23443 525 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 CCND2P30279 289 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 KIF5BP33176 963 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 DEFB103AP81534 67 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 MRPS9P82933 396 aaKnown RBP12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 RBL2Q08999 1139 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 LAMC2Q13753 1193 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 MBTPS1Q14703 1052 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 KRT40Q6A162 431 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 RAB11FIP4Q86YS3 637 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 HERC6Q8IVU3 1022 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 ZNF654Q8IZM8 581 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 CMTR1Q8N1G2 835 aaKnown RBP12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 MICALL1Q8N3F8 863 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 C7orf31Q8N865 590 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 CTCFLQ8NI51 663 aaPredicted RBP12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 CAGE1Q8TC20 777 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 AFAP1L1Q8TED9 768 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 SLC9A7Q96T83 725 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 MAP3K14Q99558 947 aa12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 PRRC2BQ5JSZ5 2229 aaKnown RBP12.69□□□□□ -0.38
TMEM39A-211ENST00000491685 ATG2AQ2TAZ0 1938 aa12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 CCDC196A0A1B0GTZ2 297 aa12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 LCHNA4D1U4 455 aa12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 SH2B2O14492 632 aaPredicted RBP12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 WDR5P61964 334 aaKnown RBP12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 TAP1Q03518 808 aa12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 ZNF618Q5T7W0 954 aa12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 Q6ZUG5 572 aa12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 FBXL16Q8N461 479 aa12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 CCDC155Q8N6L0 562 aa12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 SPATA33Q96N06 139 aa12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 LZTS2Q9BRK4 669 aa12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 C16orf70Q9BSU1 422 aa12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 KATNAL1Q9BW62 490 aa12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 MAP3K20Q9NYL2 800 aaKnown RBP12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 NAP1L2Q9ULW6 460 aaPredicted RBP12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 NLRC5Q86WI3 1866 aa12.68□□□□□ -0.38
TMEM39A-211ENST00000491685 DDAH1O94760 285 aa12.67□□□□□ -0.38
TMEM39A-211ENST00000491685 CXCL10P02778 98 aa12.67□□□□□ -0.38
TMEM39A-211ENST00000491685 LGALS2P05162 132 aa12.67□□□□□ -0.38
TMEM39A-211ENST00000491685 RBM25P49756 843 aaKnown RBP12.67□□□□□ -0.38
TMEM39A-211ENST00000491685 NEK4P51957 841 aa12.67□□□□□ -0.38
TMEM39A-211ENST00000491685 USP17L6PQ6QN14 398 aa12.67□□□□□ -0.38
TMEM39A-211ENST00000491685 SGMS1Q86VZ5 419 aa12.67□□□□□ -0.38
TMEM39A-211ENST00000491685 SAMD3Q8N6K7 520 aa12.67□□□□□ -0.38
TMEM39A-211ENST00000491685 LRRC2Q9BYS8 371 aa12.67□□□□□ -0.38
TMEM39A-211ENST00000491685 OSBPL7Q9BZF2 842 aa12.67□□□□□ -0.38
TMEM39A-211ENST00000491685 RTEL1Q9NZ71 1219 aa12.67□□□□□ -0.38
TMEM39A-211ENST00000491685 hCG_1642624A0A1W2PR95 340 aa12.66□□□□□ -0.38
TMEM39A-211ENST00000491685 MEIS2O14770 477 aa12.66□□□□□ -0.38
TMEM39A-211ENST00000491685 BAIAP3O94812 1187 aa12.66□□□□□ -0.38
TMEM39A-211ENST00000491685 SMARCA1P28370 1054 aa12.66□□□□□ -0.38
TMEM39A-211ENST00000491685 PTK7Q13308 1070 aa12.66□□□□□ -0.38
TMEM39A-211ENST00000491685 CNKSR3Q6P9H4 555 aa12.66□□□□□ -0.38
TMEM39A-211ENST00000491685 TRIM50Q86XT4 487 aa12.66□□□□□ -0.38
TMEM39A-211ENST00000491685 SRBD1Q8N5C6 995 aaKnown RBP12.66□□□□□ -0.38
TMEM39A-211ENST00000491685 PHOSPHO2Q8TCD6 241 aa12.66□□□□□ -0.38
TMEM39A-211ENST00000491685 ARNTL2Q8WYA1 636 aa12.66□□□□□ -0.38
TMEM39A-211ENST00000491685 INPP4AQ96PE3 977 aaPredicted RBP12.66□□□□□ -0.38
TMEM39A-211ENST00000491685 SPZ1Q9BXG8 430 aa12.66□□□□□ -0.38
TMEM39A-211ENST00000491685 TSPYL2Q9H2G4 693 aaPredicted RBP12.66□□□□□ -0.38
TMEM39A-211ENST00000491685 RBM28Q9NW13 759 aaKnown RBP12.66□□□□□ -0.38
TMEM39A-211ENST00000491685 MTCH2Q9Y6C9 303 aa12.66□□□□□ -0.38
TMEM39A-211ENST00000491685 KAT6AQ92794 2004 aa12.66□□□□□ -0.38
TMEM39A-211ENST00000491685 LOXHD1Q8IVV2 1947 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 ZBTB43O43298 467 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 PPFIA4O75335 1185 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 SMIM10L2AP0DMW4 78 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 SMIM10L2BP0DMW5 78 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 BMP1P13497 986 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 HOXC8P31273 242 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 ICAM3P32942 547 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 RCAN1P53805 252 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 TFF2Q03403 129 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 MKRN4PQ13434 485 aaPredicted RBP12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 KCNV1Q6PIU1 500 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 CPLX2Q6PUV4 134 aaKnown RBP12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 SERINC5Q86VE9 423 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 FANCBQ8NB91 859 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 BRF1Q92994 677 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 IL17RAQ96F46 866 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 GPR20Q99678 358 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 MLXIPQ9HAP2 919 aa12.65□□□□□ -0.38
TMEM39A-211ENST00000491685 SPATA31C2B4DYI2 1134 aa12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 TREHO43280 583 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms