RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 MRPL12P52815 198 aaKnown RBP10.28□□□□□ -0.76
HDAC3-211ENST00000491581 RAB30Q15771 203 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 CASC1Q6TDU7 716 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 SESTD1Q86VW0 696 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 CTCFLQ8NI51 663 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-211ENST00000491581 SMARCC2Q8TAQ2 1214 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 CYP2W1Q8TAV3 490 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 EMID1Q96A84 441 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-211ENST00000491581 RRP36Q96EU6 259 aaKnown RBP10.28□□□□□ -0.76
HDAC3-211ENST00000491581 GAS2L1Q99501 681 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-211ENST00000491581 GPR20Q99678 358 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 SPZ1Q9BXG8 430 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 RNPEPQ9H4A4 650 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 MLXIPQ9HAP2 919 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 PCDHA11Q9Y5I1 949 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 CNTNAP5Q8WYK1 1306 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 XIRP2A4UGR9 3374 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 NLRC5Q86WI3 1866 aa10.27□□□□□ -0.76
HDAC3-211ENST00000491581 MYO9BQ13459 2157 aa10.27□□□□□ -0.77
HDAC3-211ENST00000491581 H3BRB1 525 aa10.27□□□□□ -0.77
HDAC3-211ENST00000491581 DDAH1O94760 285 aa10.27□□□□□ -0.77
HDAC3-211ENST00000491581 ITGB5P18084 799 aa10.27□□□□□ -0.77
HDAC3-211ENST00000491581 CDC27P30260 824 aa10.27□□□□□ -0.77
HDAC3-211ENST00000491581 THPOP40225 353 aa10.27□□□□□ -0.77
HDAC3-211ENST00000491581 KCNQ1P51787 676 aa10.27□□□□□ -0.77
HDAC3-211ENST00000491581 PTPN11Q06124 597 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-211ENST00000491581 BFSP2Q13515 415 aa10.27□□□□□ -0.77
HDAC3-211ENST00000491581 SART3Q15020 963 aaKnown RBP10.27□□□□□ -0.77
HDAC3-211ENST00000491581 WWC2Q6AWC2 1192 aa10.27□□□□□ -0.77
HDAC3-211ENST00000491581 RUFY4Q6ZNE9 571 aa10.27□□□□□ -0.77
HDAC3-211ENST00000491581 TMTC3Q6ZXV5 915 aa10.27□□□□□ -0.77
HDAC3-211ENST00000491581 HEATR3Q7Z4Q2 680 aa10.27□□□□□ -0.77
HDAC3-211ENST00000491581 GDPD5Q8WTR4 605 aa10.27□□□□□ -0.77
HDAC3-211ENST00000491581 INPP4AQ96PE3 977 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-211ENST00000491581 TUT1Q9H6E5 874 aaKnown RBP10.27□□□□□ -0.77
HDAC3-211ENST00000491581 FAM217BQ9NTX9 383 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-211ENST00000491581 RAPGEFL1Q9UHV5 662 aa10.27□□□□□ -0.77
HDAC3-211ENST00000491581 KIAA1671Q9BY89 1806 aa10.26□□□□□ -0.77
HDAC3-211ENST00000491581 GSTTP1A0A1W2PQM5 241 aa10.26□□□□□ -0.77
HDAC3-211ENST00000491581 LPXNO60711 386 aa10.26□□□□□ -0.77
HDAC3-211ENST00000491581 KCNA2P16389 499 aa10.26□□□□□ -0.77
HDAC3-211ENST00000491581 NT5C2P49902 561 aa10.26□□□□□ -0.77
HDAC3-211ENST00000491581 EXOSC10Q01780 885 aaKnown RBP10.26□□□□□ -0.77
HDAC3-211ENST00000491581 FUT2Q10981 343 aa10.26□□□□□ -0.77
HDAC3-211ENST00000491581 APOA5Q6Q788 366 aa10.26□□□□□ -0.77
HDAC3-211ENST00000491581 FANCBQ8NB91 859 aa10.26□□□□□ -0.77
HDAC3-211ENST00000491581 DBF4BQ8NFT6 615 aa10.26□□□□□ -0.77
HDAC3-211ENST00000491581 AFAP1L1Q8TED9 768 aa10.26□□□□□ -0.77
HDAC3-211ENST00000491581 TRAPPC12Q8WVT3 735 aa10.26□□□□□ -0.77
HDAC3-211ENST00000491581 ATP6V0A1Q93050 837 aa10.26□□□□□ -0.77
HDAC3-211ENST00000491581 LARP6Q9BRS8 491 aaKnown RBP10.26□□□□□ -0.77
HDAC3-211ENST00000491581 MTIF3Q9H2K0 278 aaKnown RBP10.26□□□□□ -0.77
HDAC3-211ENST00000491581 PCDHA6Q9UN73 950 aa10.26□□□□□ -0.77
HDAC3-211ENST00000491581 PCDHA8Q9Y5H6 950 aa10.26□□□□□ -0.77
HDAC3-211ENST00000491581 SLC12A7Q9Y666 1083 aa10.26□□□□□ -0.77
HDAC3-211ENST00000491581 MTCH2Q9Y6C9 303 aa10.26□□□□□ -0.77
HDAC3-211ENST00000491581 COL4A6Q14031 1691 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 C17orf102A2RUQ5 167 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 FIBPO43427 364 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 TLL1O43897 1013 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 PPFIA4O75335 1185 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 LGR5O75473 907 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 CXCL10P02778 98 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 ARP10275 920 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 ACTN1P12814 892 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 ICAM3P32942 547 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 APOBRQ0VD83 1088 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 PTK7Q13308 1070 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 GRB10Q13322 594 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 BMP2KLQ5H9B9 411 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 PCNX4Q63HM2 1172 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 CNKSR3Q6P9H4 555 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 SERINC5Q86VE9 423 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 CAGE1Q8TC20 777 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 LMBR1Q8WVP7 490 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 TMEM87BQ96K49 555 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 NEK1Q96PY6 1258 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 SLC9A7Q96T83 725 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 PCYT2Q99447 389 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 C17orf80Q9BSJ5 609 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 SEZ6LQ9BYH1 1024 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 PSTPIP2Q9H939 334 aa10.25□□□□□ -0.77
HDAC3-211ENST00000491581 SEC63Q9UGP8 760 aaKnown RBP10.25□□□□□ -0.77
HDAC3-211ENST00000491581 NAP1L2Q9ULW6 460 aaPredicted RBP10.25□□□□□ -0.77
HDAC3-211ENST00000491581 KLF18A0A0U1RQI7 1052 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 DDX39AO00148 427 aaKnown RBP10.24□□□□□ -0.77
HDAC3-211ENST00000491581 STXBP3O00186 592 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 NOP56O00567 594 aaKnown RBP10.24□□□□□ -0.77
HDAC3-211ENST00000491581 UPP2O95045 317 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 CSPG5O95196 566 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 PFKMP08237 780 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 HOXC8P31273 242 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 KIF5BP33176 963 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 RFC2P35250 354 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 ADD1P35611 737 aaKnown RBP10.24□□□□□ -0.77
HDAC3-211ENST00000491581 TCF7P36402 384 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-211ENST00000491581 LIFRP42702 1097 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 KCNJ6P48051 423 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 IGBP1P78318 339 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 ARHGAP4P98171 946 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms