RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 PSEN2P49810 448 aa18.28■□□□□ 0.52
PFDN6-207ENST00000491382 FXR1P51114 621 aaKnown RBP eCLIP18.28■□□□□ 0.52
PFDN6-207ENST00000491382 ARHGAP4P98171 946 aa18.28■□□□□ 0.52
PFDN6-207ENST00000491382 MFSD10Q14728 455 aa18.28■□□□□ 0.52
PFDN6-207ENST00000491382 KIAA0753Q2KHM9 967 aa18.28■□□□□ 0.52
PFDN6-207ENST00000491382 CEP55Q53EZ4 464 aa18.28■□□□□ 0.52
PFDN6-207ENST00000491382 SESTD1Q86VW0 696 aa18.28■□□□□ 0.52
PFDN6-207ENST00000491382 KCNA2P16389 499 aa18.27■□□□□ 0.52
PFDN6-207ENST00000491382 XBP1P17861 261 aa18.27■□□□□ 0.52
PFDN6-207ENST00000491382 SP4Q02446 784 aa18.27■□□□□ 0.52
PFDN6-207ENST00000491382 PPIGQ13427 754 aaKnown RBP eCLIP18.27■□□□□ 0.522e-6■■□□□ 13.2
PFDN6-207ENST00000491382 GPR20Q99678 358 aa18.27■□□□□ 0.52
PFDN6-207ENST00000491382 ALG1Q9BT22 464 aa18.27■□□□□ 0.52
PFDN6-207ENST00000491382 C22orf23Q9BZE7 217 aa18.27■□□□□ 0.52
PFDN6-207ENST00000491382 KCNH7Q9NS40 1196 aa18.27■□□□□ 0.52
PFDN6-207ENST00000491382 ZNF215Q9UL58 517 aaPredicted RBP18.27■□□□□ 0.52
PFDN6-207ENST00000491382 H3BRB1 525 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 HAS3O00219 553 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 ATP9AO75110 1047 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 LGALS2P05162 132 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 CYP3A4P08684 503 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 PTGISQ16647 500 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 ME3Q16798 604 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 GALNT17Q6IS24 598 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 NIPA1Q7RTP0 329 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 WASF1Q92558 559 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 GTF3C6Q969F1 213 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 SDF4Q9BRK5 362 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 C16orf70Q9BSU1 422 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 NOC4LQ9BVI4 516 aaKnown RBP18.26■□□□□ 0.51
PFDN6-207ENST00000491382 TUT1Q9H6E5 874 aaKnown RBP18.26■□□□□ 0.51
PFDN6-207ENST00000491382 BCAS3Q9H6U6 928 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 PKD2L1Q9P0L9 805 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 GTF2IRD1Q9UHL9 959 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 PCDHA4Q9UN74 947 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 TRIOBPQ9H2D6 2365 aa18.26■□□□□ 0.51
PFDN6-207ENST00000491382 MEIS1O00470 390 aa18.25■□□□□ 0.51
PFDN6-207ENST00000491382 CYP2C9P11712 490 aa18.25■□□□□ 0.51
PFDN6-207ENST00000491382 CYP2C18P33260 490 aa18.25■□□□□ 0.51
PFDN6-207ENST00000491382 RBM25P49756 843 aaKnown RBP18.25■□□□□ 0.51
PFDN6-207ENST00000491382 SETQ01105 290 aaPredicted RBP18.25■□□□□ 0.51
PFDN6-207ENST00000491382 LRIT3Q3SXY7 679 aa18.25■□□□□ 0.51
PFDN6-207ENST00000491382 CCDC155Q8N6L0 562 aa18.25■□□□□ 0.51
PFDN6-207ENST00000491382 PPP1R13LQ8WUF5 828 aa18.25■□□□□ 0.51
PFDN6-207ENST00000491382 JPH1Q9HDC5 661 aaPredicted RBP18.25■□□□□ 0.51
PFDN6-207ENST00000491382 HDAC6Q9UBN7 1215 aa18.25■□□□□ 0.51
PFDN6-207ENST00000491382 NFASCO94856 1347 aa18.24■□□□□ 0.51
PFDN6-207ENST00000491382 TANC1Q9C0D5 1861 aa18.24■□□□□ 0.51
PFDN6-207ENST00000491382 CSF2RAP15509 400 aa18.24■□□□□ 0.51
PFDN6-207ENST00000491382 TCF7P36402 384 aaPredicted RBP18.24■□□□□ 0.51
PFDN6-207ENST00000491382 BFSP2Q13515 415 aa18.24■□□□□ 0.51
PFDN6-207ENST00000491382 GDF6Q6KF10 455 aaPredicted RBP18.24■□□□□ 0.51
PFDN6-207ENST00000491382 PLA2G4DQ86XP0 818 aa18.24■□□□□ 0.51
PFDN6-207ENST00000491382 BLIDQ8IZY5 108 aa18.24■□□□□ 0.51
PFDN6-207ENST00000491382 NECAB1Q8N987 351 aa18.24■□□□□ 0.51
PFDN6-207ENST00000491382 DAGLBQ8NCG7 672 aa18.24■□□□□ 0.51
PFDN6-207ENST00000491382 CYP2W1Q8TAV3 490 aa18.24■□□□□ 0.51
PFDN6-207ENST00000491382 RASGRP4Q8TDF6 673 aa18.24■□□□□ 0.51
PFDN6-207ENST00000491382 CRYGNQ8WXF5 182 aa18.24■□□□□ 0.51
PFDN6-207ENST00000491382 SEPT1Q8WYJ6 367 aa18.24■□□□□ 0.51
PFDN6-207ENST00000491382 SLC9A2Q9UBY0 812 aa18.24■□□□□ 0.51
PFDN6-207ENST00000491382 RANBP2P49792 3224 aaKnown RBP18.23■□□□□ 0.51
PFDN6-207ENST00000491382 FAM86B1E9PN63 330 aa18.23■□□□□ 0.51
PFDN6-207ENST00000491382 PITPNM1O00562 1244 aa18.23■□□□□ 0.51
PFDN6-207ENST00000491382 ADAMTS3O15072 1205 aa18.23■□□□□ 0.51
PFDN6-207ENST00000491382 FAM86B2P0C5J1 330 aa18.23■□□□□ 0.51
PFDN6-207ENST00000491382 ARP10275 920 aa18.23■□□□□ 0.51
PFDN6-207ENST00000491382 SHHQ15465 462 aa18.23■□□□□ 0.51
PFDN6-207ENST00000491382 UTP14CQ5TAP6 766 aaKnown RBP18.23■□□□□ 0.51
PFDN6-207ENST00000491382 PSRC1Q6PGN9 363 aaPredicted RBP18.23■□□□□ 0.51
PFDN6-207ENST00000491382 RETREG2Q8NC44 543 aa18.23■□□□□ 0.51
PFDN6-207ENST00000491382 CAGE1Q8TC20 777 aa18.23■□□□□ 0.51
PFDN6-207ENST00000491382 AIFM3Q96NN9 605 aa18.23■□□□□ 0.51
PFDN6-207ENST00000491382 AGO4Q9HCK5 861 aaKnown RBP18.23■□□□□ 0.51
PFDN6-207ENST00000491382 ORC3Q9UBD5 711 aaPredicted RBP18.23■□□□□ 0.51
PFDN6-207ENST00000491382 LIMCH1Q9UPQ0 1083 aa18.23■□□□□ 0.51
PFDN6-207ENST00000491382 UMODL1Q5DID0 1318 aa18.23■□□□□ 0.51
PFDN6-207ENST00000491382 LARGE1O95461 756 aa18.22■□□□□ 0.51
PFDN6-207ENST00000491382 CTDNEP1O95476 244 aa18.22■□□□□ 0.51
PFDN6-207ENST00000491382 EPHB4P54760 987 aa18.22■□□□□ 0.51
PFDN6-207ENST00000491382 CCL23P55773 120 aa18.22■□□□□ 0.51
PFDN6-207ENST00000491382 C9orf50Q5SZB4 431 aa18.22■□□□□ 0.51
PFDN6-207ENST00000491382 RPUSD2Q8IZ73 545 aaKnown RBP18.22■□□□□ 0.51
PFDN6-207ENST00000491382 RNPC3Q96LT9 517 aaKnown RBP18.22■□□□□ 0.51
PFDN6-207ENST00000491382 WNT8AQ9H1J5 351 aa18.22■□□□□ 0.51
PFDN6-207ENST00000491382 IL23AQ9NPF7 189 aa18.22■□□□□ 0.51
PFDN6-207ENST00000491382 IGLV3-22A0A075B6J6 115 aa18.21■□□□□ 0.51
PFDN6-207ENST00000491382 C17orf102A2RUQ5 167 aa18.21■□□□□ 0.51
PFDN6-207ENST00000491382 GNAT1P11488 350 aa18.21■□□□□ 0.51
PFDN6-207ENST00000491382 CIITAP33076 1130 aa18.21■□□□□ 0.51
PFDN6-207ENST00000491382 USP11P51784 963 aa18.21■□□□□ 0.51
PFDN6-207ENST00000491382 TRIM50Q86XT4 487 aa18.21■□□□□ 0.51
PFDN6-207ENST00000491382 IL27Q8NEV9 243 aa18.21■□□□□ 0.51
PFDN6-207ENST00000491382 GLG1Q92896 1179 aa18.21■□□□□ 0.51
PFDN6-207ENST00000491382 KIF2CQ99661 725 aa18.21■□□□□ 0.51
PFDN6-207ENST00000491382 ZNF577Q9BSK1 485 aa18.21■□□□□ 0.51
PFDN6-207ENST00000491382 PHF20Q9BVI0 1012 aa18.21■□□□□ 0.51
PFDN6-207ENST00000491382 SMARCAD1Q9H4L7 1026 aa18.21■□□□□ 0.51
PFDN6-207ENST00000491382 ERAP1Q9NZ08 941 aa18.21■□□□□ 0.51
PFDN6-207ENST00000491382 TCEAL9Q9UHQ7 104 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms