RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 FBXO2Q9UK22 296 aaPredicted RBP25.51■■□□□ 1.67
USF3-203ENST00000491165 MORC2Q9Y6X9 1032 aaPredicted RBP25.51■■□□□ 1.67
USF3-203ENST00000491165 PGK2P07205 417 aa25.5■■□□□ 1.67
USF3-203ENST00000491165 SPECC1Q5M775 1068 aa25.5■■□□□ 1.67
USF3-203ENST00000491165 IL31RAQ8NI17 732 aa25.5■■□□□ 1.67
USF3-203ENST00000491165 MROH8Q9H579 483 aa25.5■■□□□ 1.67
USF3-203ENST00000491165 FOXN1O15353 648 aa25.49■■□□□ 1.67
USF3-203ENST00000491165 TRPA1O75762 1119 aa25.49■■□□□ 1.67
USF3-203ENST00000491165 BMP6P22004 513 aa25.49■■□□□ 1.67
USF3-203ENST00000491165 CTGFP29279 349 aa25.49■■□□□ 1.67
USF3-203ENST00000491165 POSTNQ15063 836 aa25.49■■□□□ 1.67
USF3-203ENST00000491165 LETM2Q2VYF4 491 aa25.49■■□□□ 1.67
USF3-203ENST00000491165 RNF186Q9NXI6 227 aa25.49■■□□□ 1.67
USF3-203ENST00000491165 ALDH1A1P00352 501 aa25.49■■□□□ 1.67
USF3-203ENST00000491165 SREBF1P36956 1147 aa25.49■■□□□ 1.67
USF3-203ENST00000491165 ETF1P62495 437 aaKnown RBP25.49■■□□□ 1.67
USF3-203ENST00000491165 CCNA1P78396 465 aa25.49■■□□□ 1.67
USF3-203ENST00000491165 FBXO38Q6PIJ6 1188 aa25.49■■□□□ 1.67
USF3-203ENST00000491165 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.49■■□□□ 1.67
USF3-203ENST00000491165 NEK8Q86SG6 692 aa25.49■■□□□ 1.67
USF3-203ENST00000491165 MAP3K20Q9NYL2 800 aaKnown RBP25.49■■□□□ 1.67
USF3-203ENST00000491165 MAN1B1Q9UKM7 699 aa25.49■■□□□ 1.67
USF3-203ENST00000491165 MGAMO43451 1857 aa25.49■■□□□ 1.67
USF3-203ENST00000491165 PHLPP2Q6ZVD8 1323 aa25.48■■□□□ 1.67
USF3-203ENST00000491165 PLXNA1Q9UIW2 1896 aa25.48■■□□□ 1.67
USF3-203ENST00000491165 FOSP01100 380 aaPredicted RBP25.48■■□□□ 1.67
USF3-203ENST00000491165 ARHGAP4P98171 946 aa25.48■■□□□ 1.67
USF3-203ENST00000491165 CAP1Q01518 475 aa25.48■■□□□ 1.67
USF3-203ENST00000491165 ZNF174Q15697 407 aa25.48■■□□□ 1.67
USF3-203ENST00000491165 GPR142Q7Z601 462 aa25.48■■□□□ 1.67
USF3-203ENST00000491165 REM2Q8IYK8 340 aaPredicted RBP25.48■■□□□ 1.67
USF3-203ENST00000491165 ZNF579Q8NAF0 562 aaKnown RBP25.48■■□□□ 1.67
USF3-203ENST00000491165 DACH1Q9UI36 760 aa25.48■■□□□ 1.67
USF3-203ENST00000491165 RPTORQ8N122 1335 aa25.48■■□□□ 1.67
USF3-203ENST00000491165 TDP2O95551 362 aa25.48■■□□□ 1.67
USF3-203ENST00000491165 TTC38Q5R3I4 469 aa25.48■■□□□ 1.67
USF3-203ENST00000491165 NT5DC1Q5TFE4 455 aa25.48■■□□□ 1.67
USF3-203ENST00000491165 CEP131Q9UPN4 1083 aa25.48■■□□□ 1.67
USF3-203ENST00000491165 POLR2DO15514 142 aaKnown RBP25.47■■□□□ 1.67
USF3-203ENST00000491165 EIF2AK2P19525 551 aaKnown RBP25.47■■□□□ 1.67
USF3-203ENST00000491165 FGD4Q96M96 766 aa25.47■■□□□ 1.67
USF3-203ENST00000491165 RMDN3Q96TC7 470 aa25.47■■□□□ 1.67
USF3-203ENST00000491165 MMP19Q99542 508 aa25.47■■□□□ 1.67
USF3-203ENST00000491165 MCM3APO60318 1980 aa25.47■■□□□ 1.67
USF3-203ENST00000491165 DNAJC25-GNG10A0A024R161 153 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 MCM7P33993 719 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 COPB2P35606 906 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 GRIN1Q05586 938 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 SAMD3Q8N6K7 520 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 MLKLQ8NB16 471 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 CYP2W1Q8TAV3 490 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 PXMP2Q9NR77 195 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.46■■□□□ 1.67
USF3-203ENST00000491165 PFASO15067 1338 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 FRMPD4Q14CM0 1322 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 CCNT1O60563 726 aaKnown RBP25.46■■□□□ 1.67
USF3-203ENST00000491165 FCER1AP12319 257 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 TRAPPC10P48553 1259 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 TEX2Q8IWB9 1127 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 FAM133AQ8N9E0 248 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 SMARCE1Q969G3 411 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 ARHGAP39Q9C0H5 1083 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 INTS13Q9NVM9 706 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 SERTAD1Q9UHV2 236 aa25.46■■□□□ 1.67
USF3-203ENST00000491165 FAM86B1E9PN63 330 aa25.45■■□□□ 1.66
USF3-203ENST00000491165 SLC37A4O43826 429 aa25.45■■□□□ 1.66
USF3-203ENST00000491165 FAM86B2P0C5J1 330 aa25.45■■□□□ 1.66
USF3-203ENST00000491165 TRIML1Q8N9V2 468 aa25.45■■□□□ 1.66
USF3-203ENST00000491165 DNAI1Q9UI46 699 aa25.45■■□□□ 1.66
USF3-203ENST00000491165 SRPRBQ9Y5M8 271 aaKnown RBP25.45■■□□□ 1.66
USF3-203ENST00000491165 LRRC37A2A6NM11 1700 aa25.45■■□□□ 1.66
USF3-203ENST00000491165 SOWAHBA6NEL2 793 aa25.45■■□□□ 1.66
USF3-203ENST00000491165 ZSCAN12O43309 604 aa25.45■■□□□ 1.66
USF3-203ENST00000491165 SARSP49591 514 aaKnown RBP25.45■■□□□ 1.66
USF3-203ENST00000491165 KCTD2Q14681 263 aa25.45■■□□□ 1.66
USF3-203ENST00000491165 PGM5Q15124 567 aa25.45■■□□□ 1.66
USF3-203ENST00000491165 KANK3Q6NY19 840 aa25.45■■□□□ 1.66
USF3-203ENST00000491165 PDCD2LQ9BRP1 358 aa25.45■■□□□ 1.66
USF3-203ENST00000491165 ARHGAP6O43182 974 aa25.44■■□□□ 1.66
USF3-203ENST00000491165 COBLO75128 1261 aa25.44■■□□□ 1.66
USF3-203ENST00000491165 PRR29P0C7W0 189 aa25.44■■□□□ 1.66
USF3-203ENST00000491165 ADORA2AP29274 412 aa25.44■■□□□ 1.66
USF3-203ENST00000491165 MRPS9P82933 396 aaKnown RBP25.44■■□□□ 1.66
USF3-203ENST00000491165 ENOX1Q8TC92 643 aaKnown RBP25.44■■□□□ 1.66
USF3-203ENST00000491165 TMEM60Q9H2L4 133 aa25.44■■□□□ 1.66
USF3-203ENST00000491165 MORC3Q14149 939 aa25.43■■□□□ 1.66
USF3-203ENST00000491165 KRT222Q8N1A0 295 aa25.43■■□□□ 1.66
USF3-203ENST00000491165 NFE2L3Q9Y4A8 694 aa25.43■■□□□ 1.66
USF3-203ENST00000491165 POTEB2H3BUK9 544 aa25.43■■□□□ 1.66
USF3-203ENST00000491165 ZNF18P17022 549 aa25.43■■□□□ 1.66
USF3-203ENST00000491165 MAPK4P31152 587 aa25.43■■□□□ 1.66
USF3-203ENST00000491165 GABPB1Q06547 395 aaPredicted RBP25.43■■□□□ 1.66
USF3-203ENST00000491165 TBX2Q13207 712 aaPredicted RBP25.43■■□□□ 1.66
USF3-203ENST00000491165 ERCC6LQ2NKX8 1250 aa25.43■■□□□ 1.66
USF3-203ENST00000491165 ARHGEF16Q5VV41 709 aa25.43■■□□□ 1.66
USF3-203ENST00000491165 MCTP2Q6DN12 878 aa25.43■■□□□ 1.66
USF3-203ENST00000491165 TRIM65Q6PJ69 517 aa25.43■■□□□ 1.66
USF3-203ENST00000491165 POTEDQ86YR6 584 aa25.43■■□□□ 1.66
USF3-203ENST00000491165 TMEM139Q8IV31 216 aa25.43■■□□□ 1.66
USF3-203ENST00000491165 REXO1L1PQ8IX06 675 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms