RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 NAIPQ13075 1403 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 MIA2Q96PC5 1412 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 RNF123Q5XPI4 1314 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 ZBED9Q6R2W3 1325 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 KTN1Q86UP2 1357 aaKnown RBP2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 E9PSI1 815 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 TCERG1O14776 1098 aaKnown RBP2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 SLC27A2O14975 620 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 TBX1O43435 398 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 STK10O94804 968 aaKnown RBP2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 ADRB1P08588 477 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 GNAT1P11488 350 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 LCP1P13796 627 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 TCF3P15923 654 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 IL13P35225 146 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 GLRBP48167 497 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 SPIRE1Q08AE8 756 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 PHF19Q5T6S3 580 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 MBLAC2Q68D91 279 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 ZNF227Q86WZ6 799 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 TRIM48Q8IWZ4 208 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 RBM12BQ8IXT5 1001 aaKnown RBP2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 TXNDC5Q8NBS9 432 aaKnown RBP2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 TMEM145Q8NBT3 493 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 ARRDC4Q8NCT1 418 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 RCBTB1Q8NDN9 531 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 ADAMTS17Q8TE56 1095 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 HNRNPLLQ8WVV9 542 aaKnown RBP2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 KISS1RQ969F8 398 aaPredicted RBP2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 CCDC136Q96JN2 1154 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 IER2Q9BTL4 223 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 BARX1Q9HBU1 254 aaPredicted RBP2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 SPATA6Q9NWH7 488 aaPredicted RBP2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 SMPD4Q9NXE4 827 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 TMEFF2Q9UIK5 374 aaPredicted RBP2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 INVSQ9Y283 1065 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 EFCAB5A4FU69 1503 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 ABCA10Q8WWZ4 1543 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 FGD6Q6ZV73 1430 aa2.66□□□□□ -1.98
SNRNP40-207ENST00000491106 CCDC18Q5T9S5 1454 aa2.65□□□□□ -1.98
SNRNP40-207ENST00000491106 FYCO1Q9BQS8 1478 aa2.65□□□□□ -1.98
SNRNP40-207ENST00000491106 CCDC7Q96M83 1385 aa2.65□□□□□ -1.98
SNRNP40-207ENST00000491106 ANKRD30BQ9BXX2 1392 aa2.65□□□□□ -1.98
SNRNP40-207ENST00000491106 CC2D2AQ9P2K1 1620 aa2.65□□□□□ -1.98
SNRNP40-207ENST00000491106 SH3D21A4FU49 640 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 PLEKHD1A6NEE1 506 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 H7BY64 318 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 NOBOXO60393 691 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 C8BP07358 591 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 TSPY4P0CV99 314 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 TSPY10P0CW01 314 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 RPL13P26373 211 aaKnown RBP2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 GRIA2P42262 883 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 PPP2R2AP63151 447 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 ST5P78524 1137 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 IFRD2Q12894 506 aaPredicted RBP2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 NBPF8Q3BBV2 869 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 ZNF568Q3ZCX4 644 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 VWA3BQ502W6 1294 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 CCDC184Q52MB2 194 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 VASNQ6EMK4 673 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 NSMFQ6X4W1 530 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 ARHGEF18Q6ZSZ5 1173 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 DPH6Q7L8W6 267 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 LIMS2Q7Z4I7 341 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 ZNF761Q86XN6 746 aaPredicted RBP2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 CKAP2LQ8IYA6 745 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 GIMAP8Q8ND71 665 aaPredicted RBP2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 MICAL1Q8TDZ2 1067 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 ZNF428Q96B54 188 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 MRGPRX3Q96LB0 322 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 ALG1Q9BT22 464 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 EPB41L1Q9H4G0 881 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 ZNF408Q9H9D4 720 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 CATSPERZQ9NTU4 200 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 MYOTQ9UBF9 498 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 NUDCQ9Y266 331 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 DUSP10Q9Y6W6 482 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 MYOM3Q5VTT5 1437 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 FANCD2Q9BXW9 1451 aa2.65□□□□□ -1.99
SNRNP40-207ENST00000491106 ROCK2O75116 1388 aaKnown RBP2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 ROCK1Q13464 1354 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 CUL7Q14999 1698 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 BLACEA4D250 179 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 PPM1GO15355 546 aaPredicted RBP2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 FSHBP01225 129 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 CKMP06732 381 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 SRGAP2CP0DJJ0 459 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 KRT15P19012 456 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 ATP2B1P20020 1258 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 THBS2P35442 1172 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 ANP32AP39687 249 aaKnown RBP2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 ITGA1P56199 1179 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 CAP1Q01518 475 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 SURF1Q15526 300 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 ZFYVE27Q5T4F4 411 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 PLEKHH3Q7Z736 793 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 MTDHQ86UE4 582 aaKnown RBP2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 GGNQ86UU5 652 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 CCDC103Q8IW40 242 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms