RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 IFIH1Q9BYX4 1025 aaKnown RBP15.9■□□□□ 0.14
CTDSP1-210ENST00000491064 CCDC171Q6TFL3 1326 aa15.9■□□□□ 0.14
CTDSP1-210ENST00000491064 C5orf67F2Z3F1 127 aa15.89■□□□□ 0.13
CTDSP1-210ENST00000491064 DHX16O60231 1041 aaKnown RBP15.89■□□□□ 0.13
CTDSP1-210ENST00000491064 CAND2O75155 1236 aa15.89■□□□□ 0.13
CTDSP1-210ENST00000491064 SMIM10L2AP0DMW4 78 aa15.89■□□□□ 0.13
CTDSP1-210ENST00000491064 SMIM10L2BP0DMW5 78 aa15.89■□□□□ 0.13
CTDSP1-210ENST00000491064 DLX2Q07687 328 aaPredicted RBP15.89■□□□□ 0.13
CTDSP1-210ENST00000491064 NMIQ13287 307 aaPredicted RBP15.89■□□□□ 0.13
CTDSP1-210ENST00000491064 HERC4Q5GLZ8 1057 aaPredicted RBP15.89■□□□□ 0.13
CTDSP1-210ENST00000491064 STOX1Q6ZVD7 989 aa15.89■□□□□ 0.13
CTDSP1-210ENST00000491064 MFSD14AQ96MC6 490 aa15.89■□□□□ 0.13
CTDSP1-210ENST00000491064 RNPEPQ9H4A4 650 aa15.89■□□□□ 0.13
CTDSP1-210ENST00000491064 KAT14Q9H8E8 782 aa15.89■□□□□ 0.13
CTDSP1-210ENST00000491064 VAT1LQ9HCJ6 419 aa15.89■□□□□ 0.13
CTDSP1-210ENST00000491064 MUTYHQ9UIF7 546 aa15.89■□□□□ 0.13
CTDSP1-210ENST00000491064 KAT6AQ92794 2004 aa15.89■□□□□ 0.13
CTDSP1-210ENST00000491064 H3BRB1 525 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 MBTPS2O43462 519 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 LGALS2P05162 132 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 LINC00271P0C7V0 271 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 TGFB3P10600 412 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 CTNNB1P35222 781 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 HYAL1Q12794 435 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 PGM5Q15124 567 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 CLUL1Q15846 466 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 CCDC178Q5BJE1 867 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 VSIG10LQ86VR7 867 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 IQCA1Q86XH1 822 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 TICAM2Q86XR7 235 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 FIBCD1Q8N539 461 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 IL31RAQ8NI17 732 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 APBB2Q92870 758 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 GPKOWQ92917 476 aaPredicted RBP eCLIP15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 POP1Q99575 1024 aaKnown RBP15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 AMNQ9BXJ7 453 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 TUT1Q9H6E5 874 aaKnown RBP15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 DOCK5Q9H7D0 1870 aa15.88■□□□□ 0.13
CTDSP1-210ENST00000491064 ZDBF2Q9HCK1 2354 aa15.87■□□□□ 0.13
CTDSP1-210ENST00000491064 GRM6O15303 877 aa15.87■□□□□ 0.13
CTDSP1-210ENST00000491064 KDM4AO75164 1064 aa15.87■□□□□ 0.13
CTDSP1-210ENST00000491064 RB1P06400 928 aa15.87■□□□□ 0.13
CTDSP1-210ENST00000491064 PARP1P09874 1014 aaKnown RBP15.87■□□□□ 0.13
CTDSP1-210ENST00000491064 NT5C2P49902 561 aa15.87■□□□□ 0.13
CTDSP1-210ENST00000491064 PDE1AP54750 535 aa15.87■□□□□ 0.13
CTDSP1-210ENST00000491064 ENAHQ8N8S7 591 aaPredicted RBP15.87■□□□□ 0.13
CTDSP1-210ENST00000491064 IL17RAQ96F46 866 aa15.87■□□□□ 0.13
CTDSP1-210ENST00000491064 SNX27Q96L92 541 aa15.87■□□□□ 0.13
CTDSP1-210ENST00000491064 PHOX2BQ99453 314 aa15.87■□□□□ 0.13
CTDSP1-210ENST00000491064 LMAN2LQ9H0V9 348 aa15.87■□□□□ 0.13
CTDSP1-210ENST00000491064 BCAS3Q9H6U6 928 aa15.87■□□□□ 0.13
CTDSP1-210ENST00000491064 MLXIPQ9HAP2 919 aa15.87■□□□□ 0.13
CTDSP1-210ENST00000491064 MAP3K20Q9NYL2 800 aaKnown RBP15.87■□□□□ 0.13
CTDSP1-210ENST00000491064 TTC3P53804 2025 aa15.86■□□□□ 0.13
CTDSP1-210ENST00000491064 ZNF213O14771 459 aa15.86■□□□□ 0.13
CTDSP1-210ENST00000491064 TBX10O75333 385 aa15.86■□□□□ 0.13
CTDSP1-210ENST00000491064 HOXA13P31271 388 aaPredicted RBP15.86■□□□□ 0.13
CTDSP1-210ENST00000491064 BMPR1AP36894 532 aa15.86■□□□□ 0.13
CTDSP1-210ENST00000491064 SMAD4Q13485 552 aaKnown RBP15.86■□□□□ 0.13
CTDSP1-210ENST00000491064 RNF135Q8IUD6 432 aa15.86■□□□□ 0.13
CTDSP1-210ENST00000491064 ZFP91Q96JP5 570 aaPredicted RBP15.86■□□□□ 0.13
CTDSP1-210ENST00000491064 ZSCAN10Q96SZ4 725 aaPredicted RBP15.86■□□□□ 0.13
CTDSP1-210ENST00000491064 C11orf84Q9BUA3 381 aaPredicted RBP15.86■□□□□ 0.13
CTDSP1-210ENST00000491064 RC3H2Q9HBD1 1191 aaKnown RBP15.86■□□□□ 0.13
CTDSP1-210ENST00000491064 RWDD3Q9Y3V2 267 aa15.86■□□□□ 0.13
CTDSP1-210ENST00000491064 CFAP54Q96N23 3096 aa15.86■□□□□ 0.13
CTDSP1-210ENST00000491064 BAZ2BQ9UIF8 2168 aaKnown RBP15.85■□□□□ 0.13
CTDSP1-210ENST00000491064 PPP1R11O60927 126 aaPredicted RBP15.85■□□□□ 0.13
CTDSP1-210ENST00000491064 CCND2P30279 289 aa15.85■□□□□ 0.13
CTDSP1-210ENST00000491064 GTF2F1P35269 517 aaKnown RBP eCLIP15.85■□□□□ 0.131e-8■■■□□ 18.5
CTDSP1-210ENST00000491064 FAM26DQ5JW98 314 aa15.85■□□□□ 0.13
CTDSP1-210ENST00000491064 ANKRD45Q5TZF3 282 aa15.85■□□□□ 0.13
CTDSP1-210ENST00000491064 STAG2Q8N3U4 1231 aa15.85■□□□□ 0.13
CTDSP1-210ENST00000491064 PRSS33Q8NF86 280 aa15.85■□□□□ 0.13
CTDSP1-210ENST00000491064 EDAQ92838 391 aa15.85■□□□□ 0.13
CTDSP1-210ENST00000491064 CLP1Q92989 425 aaKnown RBP15.85■□□□□ 0.13
CTDSP1-210ENST00000491064 MTMR8Q96EF0 704 aa15.85■□□□□ 0.13
CTDSP1-210ENST00000491064 USP26Q9BXU7 913 aa15.85■□□□□ 0.13
CTDSP1-210ENST00000491064 SETD4Q9NVD3 440 aa15.85■□□□□ 0.13
CTDSP1-210ENST00000491064 ZBTB47Q9UFB7 747 aaPredicted RBP15.85■□□□□ 0.13
CTDSP1-210ENST00000491064 MYO15AQ9UKN7 3530 aa15.85■□□□□ 0.13
CTDSP1-210ENST00000491064 ADGRA3Q8IWK6 1321 aa15.85■□□□□ 0.13
CTDSP1-210ENST00000491064 CACNA1HO95180 2353 aa15.84■□□□□ 0.13
CTDSP1-210ENST00000491064 TRIM6-TRIM34B2RNG4 842 aa15.84■□□□□ 0.13
CTDSP1-210ENST00000491064 B4E1Z4 1266 aa15.84■□□□□ 0.13
CTDSP1-210ENST00000491064 STXBP3O00186 592 aa15.84■□□□□ 0.13
CTDSP1-210ENST00000491064 GNAT1P11488 350 aa15.84■□□□□ 0.13
CTDSP1-210ENST00000491064 ADAM17P78536 824 aa15.84■□□□□ 0.13
CTDSP1-210ENST00000491064 BMP8AQ7Z5Y6 402 aa15.84■□□□□ 0.13
CTDSP1-210ENST00000491064 SAMD3Q8N6K7 520 aa15.84■□□□□ 0.13
CTDSP1-210ENST00000491064 CD207Q9UJ71 328 aa15.84■□□□□ 0.13
CTDSP1-210ENST00000491064 PCDHA1Q9Y5I3 950 aa15.84■□□□□ 0.13
CTDSP1-210ENST00000491064 KIAA1671Q9BY89 1806 aa15.83■□□□□ 0.12
CTDSP1-210ENST00000491064 NOP56O00567 594 aaKnown RBP15.83■□□□□ 0.12
CTDSP1-210ENST00000491064 ZBTB5O15062 677 aa15.83■□□□□ 0.12
CTDSP1-210ENST00000491064 LINC01565O15544 149 aa15.83■□□□□ 0.12
CTDSP1-210ENST00000491064 MMP1P03956 469 aa15.83■□□□□ 0.12
CTDSP1-210ENST00000491064 MFAP1P55081 439 aaKnown RBP15.83■□□□□ 0.12
CTDSP1-210ENST00000491064 DIEXFQ68CQ4 756 aaKnown RBP15.83■□□□□ 0.12
CTDSP1-210ENST00000491064 IGFLR1Q9H665 355 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms