RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 ASPRV1Q53RT3 343 aa17.85■□□□□ 0.45
SCAMP3-208ENST00000490999 DGKHQ86XP1 1220 aa17.85■□□□□ 0.45
SCAMP3-208ENST00000490999 TRIM50Q86XT4 487 aa17.85■□□□□ 0.45
SCAMP3-208ENST00000490999 RNF41Q9H4P4 317 aaPredicted RBP17.85■□□□□ 0.45
SCAMP3-208ENST00000490999 PRKAG3Q9UGI9 489 aa17.85■□□□□ 0.45
SCAMP3-208ENST00000490999 SUPT16HQ9Y5B9 1047 aaKnown RBP17.85■□□□□ 0.45
SCAMP3-208ENST00000490999 ATG2AQ2TAZ0 1938 aa17.84■□□□□ 0.45
SCAMP3-208ENST00000490999 GRM6O15303 877 aa17.84■□□□□ 0.45
SCAMP3-208ENST00000490999 LINC01565O15544 149 aa17.84■□□□□ 0.45
SCAMP3-208ENST00000490999 TBX10O75333 385 aa17.84■□□□□ 0.45
SCAMP3-208ENST00000490999 PPFIA4O75335 1185 aa17.84■□□□□ 0.45
SCAMP3-208ENST00000490999 HOXC8P31273 242 aa17.84■□□□□ 0.45
SCAMP3-208ENST00000490999 HYAL1Q12794 435 aa17.84■□□□□ 0.45
SCAMP3-208ENST00000490999 PGM5Q15124 567 aa17.84■□□□□ 0.45
SCAMP3-208ENST00000490999 ANKRD45Q5TZF3 282 aa17.84■□□□□ 0.45
SCAMP3-208ENST00000490999 ENAHQ8N8S7 591 aaPredicted RBP17.84■□□□□ 0.45
SCAMP3-208ENST00000490999 MYO7AQ13402 2215 aa17.83■□□□□ 0.45
SCAMP3-208ENST00000490999 MYO15AQ9UKN7 3530 aa17.83■□□□□ 0.45
SCAMP3-208ENST00000490999 TRIM6-TRIM34B2RNG4 842 aa17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 B4E1Z4 1266 aa17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 H3BRB1 525 aa17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 PARP1P09874 1014 aaKnown RBP17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 LINC00271P0C7V0 271 aa17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 PCP11498 1178 aaKnown RBP17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 PDE1AP54750 535 aa17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 SMAD2Q15796 467 aaKnown RBP17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 FIBCD1Q8N539 461 aa17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 PRSS33Q8NF86 280 aa17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 ZSCAN10Q96SZ4 725 aaPredicted RBP17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 IGFLR1Q9H665 355 aa17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 TUT1Q9H6E5 874 aaKnown RBP17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 MLXIPQ9HAP2 919 aa17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 SETD4Q9NVD3 440 aa17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 TELO2Q9Y4R8 837 aa17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 NLRC5Q86WI3 1866 aa17.83■□□□□ 0.44
SCAMP3-208ENST00000490999 ADGRA3Q8IWK6 1321 aa17.82■□□□□ 0.44
SCAMP3-208ENST00000490999 MBTPS2O43462 519 aa17.82■□□□□ 0.44
SCAMP3-208ENST00000490999 CTC1Q2NKJ3 1217 aa17.82■□□□□ 0.44
SCAMP3-208ENST00000490999 IQCA1Q86XH1 822 aa17.82■□□□□ 0.44
SCAMP3-208ENST00000490999 RNF135Q8IUD6 432 aa17.82■□□□□ 0.44
SCAMP3-208ENST00000490999 STAG2Q8N3U4 1231 aa17.82■□□□□ 0.44
SCAMP3-208ENST00000490999 IL17RAQ96F46 866 aa17.82■□□□□ 0.44
SCAMP3-208ENST00000490999 SNX27Q96L92 541 aa17.82■□□□□ 0.44
SCAMP3-208ENST00000490999 AMNQ9BXJ7 453 aa17.82■□□□□ 0.44
SCAMP3-208ENST00000490999 MAF1Q9H063 256 aa17.82■□□□□ 0.44
SCAMP3-208ENST00000490999 RNPEPQ9H4A4 650 aa17.82■□□□□ 0.44
SCAMP3-208ENST00000490999 LAMA4Q16363 1823 aa17.82■□□□□ 0.44
SCAMP3-208ENST00000490999 GHRP10912 638 aa17.81■□□□□ 0.44
SCAMP3-208ENST00000490999 SP4Q02446 784 aa17.81■□□□□ 0.44
SCAMP3-208ENST00000490999 HOMER1Q86YM7 354 aa17.81■□□□□ 0.44
SCAMP3-208ENST00000490999 C11orf84Q9BUA3 381 aaPredicted RBP17.81■□□□□ 0.44
SCAMP3-208ENST00000490999 UPF3BQ9BZI7 483 aaKnown RBP17.81■□□□□ 0.44
SCAMP3-208ENST00000490999 KCNH6Q9H252 994 aa17.81■□□□□ 0.44
SCAMP3-208ENST00000490999 ZBTB47Q9UFB7 747 aaPredicted RBP17.81■□□□□ 0.44
SCAMP3-208ENST00000490999 CFAP54Q96N23 3096 aa17.81■□□□□ 0.44
SCAMP3-208ENST00000490999 NOP56O00567 594 aaKnown RBP17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 ZNF213O14771 459 aa17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 CCND2P30279 289 aa17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 ARHGAP4P98171 946 aa17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 GHRHRQ02643 423 aa17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 SMAD4Q13485 552 aaKnown RBP17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 HERC4Q5GLZ8 1057 aaPredicted RBP17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 IER5LQ5T953 404 aa17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 STOX1Q6ZVD7 989 aa17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 VSIG10LQ86VR7 867 aa17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 FCHSD1Q86WN1 690 aa17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 LMBR1Q8WVP7 490 aa17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 RILPL2Q969X0 211 aa17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 MFSD14AQ96MC6 490 aa17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 POP1Q99575 1024 aaKnown RBP17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 PCDHA1Q9Y5I3 950 aa17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 RALGAPA2Q2PPJ7 1873 aa17.8■□□□□ 0.44
SCAMP3-208ENST00000490999 TECTAO75443 2155 aa17.79■□□□□ 0.44
SCAMP3-208ENST00000490999 STXBP3O00186 592 aa17.79■□□□□ 0.44
SCAMP3-208ENST00000490999 CAND2O75155 1236 aa17.79■□□□□ 0.44
SCAMP3-208ENST00000490999 BMPR1AP36894 532 aa17.79■□□□□ 0.44
SCAMP3-208ENST00000490999 SLC35G1Q2M3R5 365 aa17.79■□□□□ 0.44
SCAMP3-208ENST00000490999 UTP14CQ5TAP6 766 aaKnown RBP17.79■□□□□ 0.44
SCAMP3-208ENST00000490999 KCNV1Q6PIU1 500 aa17.79■□□□□ 0.44
SCAMP3-208ENST00000490999 RUFY4Q6ZNE9 571 aa17.79■□□□□ 0.44
SCAMP3-208ENST00000490999 APBB2Q92870 758 aa17.79■□□□□ 0.44
SCAMP3-208ENST00000490999 RC3H2Q9HBD1 1191 aaKnown RBP17.79■□□□□ 0.44
SCAMP3-208ENST00000490999 ALG13Q9NP73 1137 aaKnown RBP17.79■□□□□ 0.44
SCAMP3-208ENST00000490999 DMDP11532 3685 aa17.78■□□□□ 0.44
SCAMP3-208ENST00000490999 C5orf67F2Z3F1 127 aa17.78■□□□□ 0.44
SCAMP3-208ENST00000490999 ZBTB5O15062 677 aa17.78■□□□□ 0.44
SCAMP3-208ENST00000490999 NDUFV1P49821 464 aa17.78■□□□□ 0.44
SCAMP3-208ENST00000490999 DIEXFQ68CQ4 756 aaKnown RBP17.78■□□□□ 0.44
SCAMP3-208ENST00000490999 CYFIP1Q7L576 1253 aa17.78■□□□□ 0.44
SCAMP3-208ENST00000490999 CD207Q9UJ71 328 aa17.78■□□□□ 0.44
SCAMP3-208ENST00000490999 MYH7BA7E2Y1 1941 aa17.78■□□□□ 0.44
SCAMP3-208ENST00000490999 KLRF2D3W0D1 207 aa17.77■□□□□ 0.44
SCAMP3-208ENST00000490999 CHRNA1P02708 482 aa17.77■□□□□ 0.44
SCAMP3-208ENST00000490999 MMP1P03956 469 aa17.77■□□□□ 0.44
SCAMP3-208ENST00000490999 SEMA3FQ13275 785 aa17.77■□□□□ 0.44
SCAMP3-208ENST00000490999 BTG3Q14201 252 aaPredicted RBP17.77■□□□□ 0.44
SCAMP3-208ENST00000490999 ADGRD2Q7Z7M1 963 aa17.77■□□□□ 0.44
SCAMP3-208ENST00000490999 GPR20Q99678 358 aa17.77■□□□□ 0.44
SCAMP3-208ENST00000490999 LMAN2LQ9H0V9 348 aa17.77■□□□□ 0.44
SCAMP3-208ENST00000490999 ZSWIM5Q9P217 1185 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms