RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 CATIPQ7Z7H3 387 aa19.21■□□□□ 0.67
SRGAP3-209ENST00000490889 IL27Q8NEV9 243 aa19.21■□□□□ 0.67
SRGAP3-209ENST00000490889 TUT1Q9H6E5 874 aaKnown RBP19.21■□□□□ 0.67
SRGAP3-209ENST00000490889 LY9Q9HBG7 655 aa19.21■□□□□ 0.67
SRGAP3-209ENST00000490889 RTEL1Q9NZ71 1219 aa19.21■□□□□ 0.67
SRGAP3-209ENST00000490889 RBM8AQ9Y5S9 174 aaKnown RBP19.21■□□□□ 0.67
SRGAP3-209ENST00000490889 MICAL3Q7RTP6 2002 aa19.2■□□□□ 0.66
SRGAP3-209ENST00000490889 C17orf102A2RUQ5 167 aa19.2■□□□□ 0.66
SRGAP3-209ENST00000490889 TREHO43280 583 aa19.2■□□□□ 0.66
SRGAP3-209ENST00000490889 SMIM10L2AP0DMW4 78 aa19.2■□□□□ 0.66
SRGAP3-209ENST00000490889 SMIM10L2BP0DMW5 78 aa19.2■□□□□ 0.66
SRGAP3-209ENST00000490889 ICAM3P32942 547 aa19.2■□□□□ 0.66
SRGAP3-209ENST00000490889 IKBKEQ14164 716 aa19.2■□□□□ 0.66
SRGAP3-209ENST00000490889 ZNF654Q8IZM8 581 aa19.2■□□□□ 0.66
SRGAP3-209ENST00000490889 DBF4BQ8NFT6 615 aa19.2■□□□□ 0.66
SRGAP3-209ENST00000490889 ATP6V0A1Q93050 837 aa19.2■□□□□ 0.66
SRGAP3-209ENST00000490889 RAD9AQ99638 391 aa19.2■□□□□ 0.66
SRGAP3-209ENST00000490889 RNPEPQ9H4A4 650 aa19.2■□□□□ 0.66
SRGAP3-209ENST00000490889 MTUS1Q9ULD2 1270 aa19.2■□□□□ 0.66
SRGAP3-209ENST00000490889 SIP14410 1827 aa19.19■□□□□ 0.66
SRGAP3-209ENST00000490889 LINC01553A4QN01 128 aa19.19■□□□□ 0.66
SRGAP3-209ENST00000490889 RSPH10B2B2RC85 870 aa19.19■□□□□ 0.66
SRGAP3-209ENST00000490889 SPATA31C2B4DYI2 1134 aa19.19■□□□□ 0.66
SRGAP3-209ENST00000490889 RSPH10BP0C881 870 aa19.19■□□□□ 0.66
SRGAP3-209ENST00000490889 GNPTABQ3T906 1256 aa19.19■□□□□ 0.66
SRGAP3-209ENST00000490889 USP17L6PQ6QN14 398 aa19.19■□□□□ 0.66
SRGAP3-209ENST00000490889 METTL7BQ6UX53 244 aa19.19■□□□□ 0.66
SRGAP3-209ENST00000490889 CYFIP1Q7L576 1253 aa19.19■□□□□ 0.66
SRGAP3-209ENST00000490889 TRIM50Q86XT4 487 aa19.19■□□□□ 0.66
SRGAP3-209ENST00000490889 GPR20Q99678 358 aa19.19■□□□□ 0.66
SRGAP3-209ENST00000490889 SPZ1Q9BXG8 430 aa19.19■□□□□ 0.66
SRGAP3-209ENST00000490889 SUGCTQ9HAC7 445 aa19.19■□□□□ 0.66
SRGAP3-209ENST00000490889 NOP56O00567 594 aaKnown RBP19.18■□□□□ 0.66
SRGAP3-209ENST00000490889 MEIS2O14770 477 aa19.18■□□□□ 0.66
SRGAP3-209ENST00000490889 EFCAB14O75071 495 aa19.18■□□□□ 0.66
SRGAP3-209ENST00000490889 PLEKHA8P1O95397 391 aa19.18■□□□□ 0.66
SRGAP3-209ENST00000490889 ERVK-21P61565 698 aa19.18■□□□□ 0.66
SRGAP3-209ENST00000490889 FIBPO43427 364 aa19.17■□□□□ 0.66
SRGAP3-209ENST00000490889 STAM2O75886 525 aa19.17■□□□□ 0.66
SRGAP3-209ENST00000490889 DDAH1O94760 285 aa19.17■□□□□ 0.66
SRGAP3-209ENST00000490889 CTSHP09668 335 aa19.17■□□□□ 0.66
SRGAP3-209ENST00000490889 COL9A1P20849 921 aa19.17■□□□□ 0.66
SRGAP3-209ENST00000490889 NEDD9Q14511 834 aa19.17■□□□□ 0.66
SRGAP3-209ENST00000490889 AAK1Q2M2I8 961 aa19.17■□□□□ 0.66
SRGAP3-209ENST00000490889 PLEKHG4Q58EX7 1191 aa19.17■□□□□ 0.66
SRGAP3-209ENST00000490889 CMTR1Q8N1G2 835 aaKnown RBP19.17■□□□□ 0.66
SRGAP3-209ENST00000490889 CTCFLQ8NI51 663 aaPredicted RBP19.17■□□□□ 0.66
SRGAP3-209ENST00000490889 MAP3K14Q99558 947 aa19.17■□□□□ 0.66
SRGAP3-209ENST00000490889 SETD4Q9NVD3 440 aa19.17■□□□□ 0.66
SRGAP3-209ENST00000490889 RAPGEFL1Q9UHV5 662 aa19.17■□□□□ 0.66
SRGAP3-209ENST00000490889 COG5Q9UP83 839 aa19.17■□□□□ 0.66
SRGAP3-209ENST00000490889 EMSYQ7Z589 1322 aa19.17■□□□□ 0.66
SRGAP3-209ENST00000490889 BRWD1Q9NSI6 2320 aa19.17■□□□□ 0.66
SRGAP3-209ENST00000490889 PIK3CDO00329 1044 aa19.16■□□□□ 0.66
SRGAP3-209ENST00000490889 PRC1O43663 620 aa19.16■□□□□ 0.66
SRGAP3-209ENST00000490889 RXRAP19793 462 aa19.16■□□□□ 0.66
SRGAP3-209ENST00000490889 PCNX4Q63HM2 1172 aa19.16■□□□□ 0.66
SRGAP3-209ENST00000490889 MYOCDQ8IZQ8 938 aa19.16■□□□□ 0.66
SRGAP3-209ENST00000490889 SRBD1Q8N5C6 995 aaKnown RBP19.16■□□□□ 0.66
SRGAP3-209ENST00000490889 SMARCC2Q8TAQ2 1214 aa19.16■□□□□ 0.66
SRGAP3-209ENST00000490889 RRP36Q96EU6 259 aaKnown RBP19.16■□□□□ 0.66
SRGAP3-209ENST00000490889 TGS1Q96RS0 853 aaKnown RBP19.16■□□□□ 0.66
SRGAP3-209ENST00000490889 C17orf80Q9BSJ5 609 aa19.16■□□□□ 0.66
SRGAP3-209ENST00000490889 USP26Q9BXU7 913 aa19.16■□□□□ 0.66
SRGAP3-209ENST00000490889 LSG1Q9H089 658 aaKnown RBP19.16■□□□□ 0.66
SRGAP3-209ENST00000490889 SH2B2O14492 632 aaPredicted RBP19.15■□□□□ 0.66
SRGAP3-209ENST00000490889 ADAM17P78536 824 aa19.15■□□□□ 0.66
SRGAP3-209ENST00000490889 HTRA4P83105 476 aaPredicted RBP19.15■□□□□ 0.66
SRGAP3-209ENST00000490889 SP4Q02446 784 aa19.15■□□□□ 0.66
SRGAP3-209ENST00000490889 UTP14CQ5TAP6 766 aaKnown RBP19.15■□□□□ 0.66
SRGAP3-209ENST00000490889 RAB11FIP4Q86YS3 637 aa19.15■□□□□ 0.66
SRGAP3-209ENST00000490889 HLA-CQ95604 372 aa19.15■□□□□ 0.66
SRGAP3-209ENST00000490889 LMCD1Q9NZU5 365 aa19.15■□□□□ 0.66
SRGAP3-209ENST00000490889 ATP9AO75110 1047 aa19.14■□□□□ 0.65
SRGAP3-209ENST00000490889 AMHP03971 560 aa19.14■□□□□ 0.65
SRGAP3-209ENST00000490889 SMARCA1P28370 1054 aa19.14■□□□□ 0.65
SRGAP3-209ENST00000490889 KIF5BP33176 963 aa19.14■□□□□ 0.65
SRGAP3-209ENST00000490889 CASC1Q6TDU7 716 aa19.14■□□□□ 0.65
SRGAP3-209ENST00000490889 SP7Q8TDD2 431 aaPredicted RBP19.14■□□□□ 0.65
SRGAP3-209ENST00000490889 SENP7Q9BQF6 1050 aa19.14■□□□□ 0.65
SRGAP3-209ENST00000490889 INSL6Q9Y581 213 aa19.14■□□□□ 0.65
SRGAP3-209ENST00000490889 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.13■□□□□ 0.65
SRGAP3-209ENST00000490889 hCG_1642624A0A1W2PR95 340 aa19.13■□□□□ 0.65
SRGAP3-209ENST00000490889 SLC27A2O14975 620 aa19.13■□□□□ 0.65
SRGAP3-209ENST00000490889 LMBR1Q8WVP7 490 aa19.13■□□□□ 0.65
SRGAP3-209ENST00000490889 CUL5Q93034 780 aa19.13■□□□□ 0.65
SRGAP3-209ENST00000490889 MTA3Q9BTC8 594 aa19.13■□□□□ 0.65
SRGAP3-209ENST00000490889 SEC63Q9UGP8 760 aaKnown RBP19.13■□□□□ 0.65
SRGAP3-209ENST00000490889 CAND2O75155 1236 aa19.12■□□□□ 0.65
SRGAP3-209ENST00000490889 KCNA2P16389 499 aa19.12■□□□□ 0.65
SRGAP3-209ENST00000490889 ITGB5P18084 799 aa19.12■□□□□ 0.65
SRGAP3-209ENST00000490889 MCM5P33992 734 aa19.12■□□□□ 0.65
SRGAP3-209ENST00000490889 ARHGAP4P98171 946 aa19.12■□□□□ 0.65
SRGAP3-209ENST00000490889 UBE2SQ16763 222 aa19.12■□□□□ 0.65
SRGAP3-209ENST00000490889 XRRA1Q6P2D8 792 aa19.12■□□□□ 0.65
SRGAP3-209ENST00000490889 NFXL1Q6ZNB6 911 aa19.12■□□□□ 0.65
SRGAP3-209ENST00000490889 SEPT8Q92599 483 aa19.12■□□□□ 0.65
SRGAP3-209ENST00000490889 TMEM87BQ96K49 555 aa19.12■□□□□ 0.65
SRGAP3-209ENST00000490889 LZTS2Q9BRK4 669 aa19.12■□□□□ 0.65
SRGAP3-209ENST00000490889 LRRC2Q9BYS8 371 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms