RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 AKAP11Q9UKA4 1901 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 NRAPQ86VF7 1730 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 NCK2O43639 380 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 GUCY2FP51841 1108 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 SEC24CP53992 1094 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 E2F5Q15329 346 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 PTPROQ16827 1216 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 PARP10Q53GL7 1025 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 SOGA3Q5TF21 947 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 MAATS1Q7Z4T9 603 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 B4GALNT2Q8NHY0 566 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 RPGRQ92834 1020 aaKnown RBP11.17□□□□□ -0.62
BRD9-209ENST00000490814 SCLT1Q96NL6 688 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 MTA3Q9BTC8 594 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 BRIP1Q9BX63 1249 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 ZHX3Q9H4I2 956 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 PPANQ9NQ55 473 aaKnown RBP11.17□□□□□ -0.62
BRD9-209ENST00000490814 BATF3Q9NR55 127 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 ZC3H4Q9UPT8 1303 aaKnown RBP11.17□□□□□ -0.62
BRD9-209ENST00000490814 MEFVO15553 781 aaPredicted RBP11.17□□□□□ -0.62
BRD9-209ENST00000490814 PAPD7Q5XG87 772 aaKnown RBP11.17□□□□□ -0.62
BRD9-209ENST00000490814 TLDC1Q6P9B6 456 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 TSEN2Q8NCE0 465 aaKnown RBP11.17□□□□□ -0.62
BRD9-209ENST00000490814 P2RX5Q93086 422 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.17□□□□□ -0.62
BRD9-209ENST00000490814 TPP2P29144 1249 aaPredicted RBP11.17□□□□□ -0.62
BRD9-209ENST00000490814 HIBADHP31937 336 aaKnown RBP11.17□□□□□ -0.62
BRD9-209ENST00000490814 APBA1Q02410 837 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 LRRC41Q15345 812 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 CAPRIN2Q6IMN6 1127 aaKnown RBP11.17□□□□□ -0.62
BRD9-209ENST00000490814 NFRKBQ6P4R8 1299 aa11.17□□□□□ -0.62
BRD9-209ENST00000490814 CCDC43Q96MW1 224 aaKnown RBP11.17□□□□□ -0.62
BRD9-209ENST00000490814 BRWD3Q6RI45 1802 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 BICDL2A1A5D9 508 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 E7EVH7 732 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 SF3A3Q12874 501 aaKnown RBP eCLIP11.16□□□□□ -0.623e-7■■■■□ 22.6
BRD9-209ENST00000490814 PDIA5Q14554 519 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 CCDC40Q4G0X9 1142 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 NAALADL2Q58DX5 795 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 C8orf74Q6P047 294 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 SLC51AQ86UW1 340 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 FAM114A1Q8IWE2 563 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 RBM12BQ8IXT5 1001 aaKnown RBP11.16□□□□□ -0.62
BRD9-209ENST00000490814 MAB21L3Q8N8X9 362 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 PROCA1Q8NCQ7 364 aaPredicted RBP11.16□□□□□ -0.62
BRD9-209ENST00000490814 AKT1S1Q96B36 256 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 PLEKHG4BQ96PX9 1271 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.16□□□□□ -0.62
BRD9-209ENST00000490814 TMEM165Q9HC07 324 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 MINPP1Q9UNW1 487 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 GOLGA6L7A0A1B0GV03 622 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 ESYT3A0FGR9 886 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 G3V3G9 751 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 EIF4A3P38919 411 aaKnown RBP11.16□□□□□ -0.62
BRD9-209ENST00000490814 VAV2P52735 878 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 SMTNP53814 917 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 ZBED6P86452 979 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 DIXDC1Q155Q3 683 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 DCAF8Q5TAQ9 597 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 ARL6IP4Q66PJ3 421 aaKnown RBP11.16□□□□□ -0.62
BRD9-209ENST00000490814 CALML4Q96GE6 196 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 ALS2CR12Q96Q35 445 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 TSGA10Q9BZW7 698 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 THAP9Q9H5L6 903 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 TBC1D7Q9P0N9 293 aa11.16□□□□□ -0.62
BRD9-209ENST00000490814 MYH7P12883 1935 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 NKRFO15226 690 aaKnown RBP eCLIP11.15□□□□□ -0.62
BRD9-209ENST00000490814 MAGEA1P43355 309 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 TTMPQ5BVD1 217 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 RC3H1Q5TC82 1133 aaKnown RBP11.15□□□□□ -0.62
BRD9-209ENST00000490814 TMC4Q7Z404 712 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 CCDC50Q8IVM0 306 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 MAPKAPK5Q8IW41 473 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 FLAD1Q8NFF5 587 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 TGFBRAP1Q8WUH2 860 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 NSUN4Q96CB9 384 aaKnown RBP11.15□□□□□ -0.62
BRD9-209ENST00000490814 ZIM3Q96PE6 472 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 DNAJC7Q99615 494 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 MMTAG2Q9BU76 263 aaKnown RBP11.15□□□□□ -0.62
BRD9-209ENST00000490814 ANKIB1Q9P2G1 1089 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 CAPN6Q9Y6Q1 641 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 LAMB4A4D0S4 1761 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 GRIN2DO15399 1336 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 NTSR2O95665 410 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 EPHB4P54760 987 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 UBE4AQ14139 1066 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 GPR162Q16538 588 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 KCTD19Q17RG1 926 aaPredicted RBP11.15□□□□□ -0.62
BRD9-209ENST00000490814 SPATA4Q8NEY3 305 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 ZNF384Q8TF68 577 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 AENQ8WTP8 325 aaKnown RBP11.15□□□□□ -0.62
BRD9-209ENST00000490814 MKL1Q969V6 931 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 RNPC3Q96LT9 517 aaKnown RBP11.15□□□□□ -0.62
BRD9-209ENST00000490814 UBA5Q9GZZ9 404 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 KANSL2Q9H9L4 492 aa11.15□□□□□ -0.62
BRD9-209ENST00000490814 SRGNP10124 158 aa11.15□□□□□ -0.63
BRD9-209ENST00000490814 PDHBP11177 359 aa11.15□□□□□ -0.63
BRD9-209ENST00000490814 CCNE1P24864 410 aa11.15□□□□□ -0.63
BRD9-209ENST00000490814 RASSF7Q02833 373 aa11.15□□□□□ -0.63
BRD9-209ENST00000490814 ODF2Q5BJF6 829 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms