RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 RFXAPO00287 272 aa22.7■■□□□ 1.22
SREBF1-216ENST00000490796 GNAT1P11488 350 aa22.7■■□□□ 1.22
SREBF1-216ENST00000490796 RNF20Q5VTR2 975 aa22.7■■□□□ 1.22
SREBF1-216ENST00000490796 CREB3L3Q68CJ9 461 aa22.7■■□□□ 1.22
SREBF1-216ENST00000490796 SYNE3Q6ZMZ3 975 aa22.7■■□□□ 1.22
SREBF1-216ENST00000490796 ZNF215Q9UL58 517 aaPredicted RBP22.7■■□□□ 1.22
SREBF1-216ENST00000490796 FRMPD4Q14CM0 1322 aa22.7■■□□□ 1.22
SREBF1-216ENST00000490796 RSPH10B2B2RC85 870 aa22.69■■□□□ 1.22
SREBF1-216ENST00000490796 PLEKHA8P1O95397 391 aa22.69■■□□□ 1.22
SREBF1-216ENST00000490796 RSPH10BP0C881 870 aa22.69■■□□□ 1.22
SREBF1-216ENST00000490796 SMIM10L2AP0DMW4 78 aa22.69■■□□□ 1.22
SREBF1-216ENST00000490796 SMIM10L2BP0DMW5 78 aa22.69■■□□□ 1.22
SREBF1-216ENST00000490796 RXRAP19793 462 aa22.69■■□□□ 1.22
SREBF1-216ENST00000490796 LIFRP42702 1097 aa22.69■■□□□ 1.22
SREBF1-216ENST00000490796 SP4Q02446 784 aa22.69■■□□□ 1.22
SREBF1-216ENST00000490796 GPNMBQ14956 572 aa22.69■■□□□ 1.22
SREBF1-216ENST00000490796 TRIM71Q2Q1W2 868 aaKnown RBP22.69■■□□□ 1.22
SREBF1-216ENST00000490796 PCNX4Q63HM2 1172 aa22.69■■□□□ 1.22
SREBF1-216ENST00000490796 GIMAP8Q8ND71 665 aaPredicted RBP22.69■■□□□ 1.22
SREBF1-216ENST00000490796 PSTPIP2Q9H939 334 aa22.69■■□□□ 1.22
SREBF1-216ENST00000490796 CHD7Q9P2D1 2997 aa22.69■■□□□ 1.22
SREBF1-216ENST00000490796 PRRC2BQ5JSZ5 2229 aaKnown RBP22.68■■□□□ 1.22
SREBF1-216ENST00000490796 PIK3CDO00329 1044 aa22.68■■□□□ 1.22
SREBF1-216ENST00000490796 LGR5O75473 907 aa22.68■■□□□ 1.22
SREBF1-216ENST00000490796 DEFB103AP81534 67 aa22.68■■□□□ 1.22
SREBF1-216ENST00000490796 UTP14CQ5TAP6 766 aaKnown RBP22.68■■□□□ 1.22
SREBF1-216ENST00000490796 SERINC5Q86VE9 423 aa22.68■■□□□ 1.22
SREBF1-216ENST00000490796 CMTR1Q8N1G2 835 aaKnown RBP22.68■■□□□ 1.22
SREBF1-216ENST00000490796 SRBD1Q8N5C6 995 aaKnown RBP22.68■■□□□ 1.22
SREBF1-216ENST00000490796 WNT8BQ93098 351 aa22.68■■□□□ 1.22
SREBF1-216ENST00000490796 NCOR1O75376 2440 aa22.67■■□□□ 1.22
SREBF1-216ENST00000490796 AAK1Q2M2I8 961 aa22.67■■□□□ 1.22
SREBF1-216ENST00000490796 FAM117BQ6P1L5 589 aa22.67■■□□□ 1.22
SREBF1-216ENST00000490796 TMCO2Q7Z6W1 182 aaPredicted RBP22.67■■□□□ 1.22
SREBF1-216ENST00000490796 RAB11FIP4Q86YS3 637 aa22.67■■□□□ 1.22
SREBF1-216ENST00000490796 CCDC82Q8N4S0 544 aa22.67■■□□□ 1.22
SREBF1-216ENST00000490796 CDHR1Q96JP9 859 aa22.67■■□□□ 1.22
SREBF1-216ENST00000490796 RAD9AQ99638 391 aa22.67■■□□□ 1.22
SREBF1-216ENST00000490796 GPR20Q99678 358 aa22.67■■□□□ 1.22
SREBF1-216ENST00000490796 SENP7Q9BQF6 1050 aa22.67■■□□□ 1.22
SREBF1-216ENST00000490796 LRRC2Q9BYS8 371 aa22.67■■□□□ 1.22
SREBF1-216ENST00000490796 RNPEPQ9H4A4 650 aa22.67■■□□□ 1.22
SREBF1-216ENST00000490796 BCAS3Q9H6U6 928 aa22.67■■□□□ 1.22
SREBF1-216ENST00000490796 MTCH2Q9Y6C9 303 aa22.67■■□□□ 1.22
SREBF1-216ENST00000490796 SPDYE3A6NKU9 549 aa22.66■■□□□ 1.22
SREBF1-216ENST00000490796 TNFRSF10AO00220 468 aa22.66■■□□□ 1.22
SREBF1-216ENST00000490796 MEIS2O14770 477 aa22.66■■□□□ 1.22
SREBF1-216ENST00000490796 GJB5O95377 273 aa22.66■■□□□ 1.22
SREBF1-216ENST00000490796 HIC1Q14526 733 aa22.66■■□□□ 1.22
SREBF1-216ENST00000490796 MICU3Q86XE3 530 aa22.66■■□□□ 1.22
SREBF1-216ENST00000490796 TREHO43280 583 aa22.65■■□□□ 1.22
SREBF1-216ENST00000490796 AMHP03971 560 aa22.65■■□□□ 1.22
SREBF1-216ENST00000490796 POU3F3P20264 500 aaPredicted RBP22.65■■□□□ 1.22
SREBF1-216ENST00000490796 SEMA3FQ13275 785 aa22.65■■□□□ 1.22
SREBF1-216ENST00000490796 NECTIN1Q15223 517 aa22.65■■□□□ 1.22
SREBF1-216ENST00000490796 TRAF7Q6Q0C0 670 aa22.65■■□□□ 1.22
SREBF1-216ENST00000490796 HEATR3Q7Z4Q2 680 aa22.65■■□□□ 1.22
SREBF1-216ENST00000490796 FANCBQ8NB91 859 aa22.65■■□□□ 1.22
SREBF1-216ENST00000490796 DBF4BQ8NFT6 615 aa22.65■■□□□ 1.22
SREBF1-216ENST00000490796 GPRASP2Q96D09 838 aa22.65■■□□□ 1.22
SREBF1-216ENST00000490796 EHMT1Q9H9B1 1298 aa22.65■■□□□ 1.22
SREBF1-216ENST00000490796 SETD4Q9NVD3 440 aa22.65■■□□□ 1.22
SREBF1-216ENST00000490796 hCG_1642624A0A1W2PR95 340 aa22.64■■□□□ 1.21
SREBF1-216ENST00000490796 EPOPA6NHQ4 379 aa22.64■■□□□ 1.21
SREBF1-216ENST00000490796 CAND2O75155 1236 aa22.64■■□□□ 1.21
SREBF1-216ENST00000490796 ARHGEF15O94989 841 aa22.64■■□□□ 1.21
SREBF1-216ENST00000490796 CTSHP09668 335 aa22.64■■□□□ 1.21
SREBF1-216ENST00000490796 MBTPS1Q14703 1052 aa22.64■■□□□ 1.21
SREBF1-216ENST00000490796 TMTC3Q6ZXV5 915 aa22.64■■□□□ 1.21
SREBF1-216ENST00000490796 TRIM50Q86XT4 487 aa22.64■■□□□ 1.21
SREBF1-216ENST00000490796 ADAMTS19Q8TE59 1207 aa22.64■■□□□ 1.21
SREBF1-216ENST00000490796 SEPT8Q92599 483 aa22.64■■□□□ 1.21
SREBF1-216ENST00000490796 SPTBN5Q9NRC6 3674 aaKnown RBP22.63■■□□□ 1.21
SREBF1-216ENST00000490796 LCHNA4D1U4 455 aa22.63■■□□□ 1.21
SREBF1-216ENST00000490796 ARHGAP4P98171 946 aa22.63■■□□□ 1.21
SREBF1-216ENST00000490796 GRB10Q13322 594 aa22.63■■□□□ 1.21
SREBF1-216ENST00000490796 TCTN1Q2MV58 587 aa22.63■■□□□ 1.21
SREBF1-216ENST00000490796 BMP2KLQ5H9B9 411 aa22.63■■□□□ 1.21
SREBF1-216ENST00000490796 MYOCDQ8IZQ8 938 aa22.63■■□□□ 1.21
SREBF1-216ENST00000490796 NEK1Q96PY6 1258 aa22.63■■□□□ 1.21
SREBF1-216ENST00000490796 TGS1Q96RS0 853 aaKnown RBP22.63■■□□□ 1.21
SREBF1-216ENST00000490796 UHRF1Q96T88 793 aaPredicted RBP22.63■■□□□ 1.21
SREBF1-216ENST00000490796 MTUS1Q9ULD2 1270 aa22.63■■□□□ 1.21
SREBF1-216ENST00000490796 UBE2SQ16763 222 aa22.62■■□□□ 1.21
SREBF1-216ENST00000490796 CENPQQ7L2Z9 268 aaPredicted RBP22.62■■□□□ 1.21
SREBF1-216ENST00000490796 RBM28Q9NW13 759 aaKnown RBP22.62■■□□□ 1.21
SREBF1-216ENST00000490796 INSL6Q9Y581 213 aa22.62■■□□□ 1.21
SREBF1-216ENST00000490796 HOXC8P31273 242 aa22.61■■□□□ 1.21
SREBF1-216ENST00000490796 TCF7P36402 384 aaPredicted RBP22.61■■□□□ 1.21
SREBF1-216ENST00000490796 MTMR1Q13613 665 aa22.61■■□□□ 1.21
SREBF1-216ENST00000490796 PLEKHG4Q58EX7 1191 aa22.61■■□□□ 1.21
SREBF1-216ENST00000490796 KRT40Q6A162 431 aa22.61■■□□□ 1.21
SREBF1-216ENST00000490796 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.61■■□□□ 1.21
SREBF1-216ENST00000490796 SGMS1Q86VZ5 419 aa22.61■■□□□ 1.21
SREBF1-216ENST00000490796 SEPT1Q8WYJ6 367 aa22.61■■□□□ 1.21
SREBF1-216ENST00000490796 PKD2L1Q9P0L9 805 aa22.61■■□□□ 1.21
SREBF1-216ENST00000490796 PCDHA6Q9UN73 950 aa22.61■■□□□ 1.21
SREBF1-216ENST00000490796 COG5Q9UP83 839 aa22.61■■□□□ 1.21
SREBF1-216ENST00000490796 PCDHA8Q9Y5H6 950 aa22.61■■□□□ 1.21
SREBF1-216ENST00000490796 NRCAMQ92823 1304 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms