RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 CCDC196A0A1B0GTZ2 297 aa35.96■■■■□ 3.35
LDB1-204ENST00000490751 FBXL16Q8N461 479 aa35.96■■■■□ 3.35
LDB1-204ENST00000490751 AFAP1L1Q8TED9 768 aa35.96■■■■□ 3.35
LDB1-204ENST00000490751 GPR20Q99678 358 aa35.96■■■■□ 3.35
LDB1-204ENST00000490751 AGXT2Q9BYV1 514 aa35.96■■■■□ 3.35
LDB1-204ENST00000490751 EHMT1Q9H9B1 1298 aa35.96■■■■□ 3.35
LDB1-204ENST00000490751 BARHL2Q9NY43 387 aa35.96■■■■□ 3.35
LDB1-204ENST00000490751 NID2Q14112 1375 aa35.95■■■■□ 3.35
LDB1-204ENST00000490751 ZBBXA8MT70 800 aa35.95■■■■□ 3.35
LDB1-204ENST00000490751 H3BRB1 525 aa35.95■■■■□ 3.35
LDB1-204ENST00000490751 ITGB5P18084 799 aa35.95■■■■□ 3.35
LDB1-204ENST00000490751 ADCY7P51828 1080 aa35.95■■■■□ 3.35
LDB1-204ENST00000490751 SP4Q02446 784 aa35.95■■■■□ 3.35
LDB1-204ENST00000490751 ERICH6BQ5W0A0 696 aa35.95■■■■□ 3.35
LDB1-204ENST00000490751 CDHR1Q96JP9 859 aa35.95■■■■□ 3.35
LDB1-204ENST00000490751 TUT1Q9H6E5 874 aaKnown RBP35.95■■■■□ 3.35
LDB1-204ENST00000490751 UBIAD1Q9Y5Z9 338 aa35.95■■■■□ 3.35
LDB1-204ENST00000490751 ZNF200P98182 395 aaPredicted RBP35.94■■■■□ 3.34
LDB1-204ENST00000490751 USP26Q9BXU7 913 aa35.94■■■■□ 3.34
LDB1-204ENST00000490751 TELO2Q9Y4R8 837 aa35.94■■■■□ 3.34
LDB1-204ENST00000490751 SLC4A7Q9Y6M7 1214 aa35.94■■■■□ 3.34
LDB1-204ENST00000490751 RBL2Q08999 1139 aa35.93■■■■□ 3.34
LDB1-204ENST00000490751 PTK7Q13308 1070 aa35.93■■■■□ 3.34
LDB1-204ENST00000490751 HIC1Q14526 733 aa35.93■■■■□ 3.34
LDB1-204ENST00000490751 TEX2Q8IWB9 1127 aa35.93■■■■□ 3.34
LDB1-204ENST00000490751 GIMAP8Q8ND71 665 aaPredicted RBP35.93■■■■□ 3.34
LDB1-204ENST00000490751 TET1Q8NFU7 2136 aa35.92■■■■□ 3.34
LDB1-204ENST00000490751 SMCO2A6NFE2 343 aa35.92■■■■□ 3.34
LDB1-204ENST00000490751 ATP9AO75110 1047 aa35.92■■■■□ 3.34
LDB1-204ENST00000490751 ACTN1P12814 892 aa35.92■■■■□ 3.34
LDB1-204ENST00000490751 SELPP16109 830 aa35.92■■■■□ 3.34
LDB1-204ENST00000490751 KCNA2P16389 499 aa35.92■■■■□ 3.34
LDB1-204ENST00000490751 MTMR1Q13613 665 aa35.92■■■■□ 3.34
LDB1-204ENST00000490751 LRRC8DQ7L1W4 858 aa35.92■■■■□ 3.34
LDB1-204ENST00000490751 MYLIPQ8WY64 445 aa35.92■■■■□ 3.34
LDB1-204ENST00000490751 PGBD1Q96JS3 809 aa35.92■■■■□ 3.34
LDB1-204ENST00000490751 FTOQ9C0B1 505 aaKnown RBP eCLIP35.92■■■■□ 3.344e-9■□□□□ 10.6
LDB1-204ENST00000490751 CKBP12277 381 aa35.91■■■■□ 3.34
LDB1-204ENST00000490751 PFKFB3Q16875 520 aaPredicted RBP35.91■■■■□ 3.34
LDB1-204ENST00000490751 TRIM50Q86XT4 487 aa35.91■■■■□ 3.34
LDB1-204ENST00000490751 ANO3Q9BYT9 981 aa35.91■■■■□ 3.34
LDB1-204ENST00000490751 ZNF576Q9H609 170 aa35.91■■■■□ 3.34
LDB1-204ENST00000490751 JADE2Q9NQC1 790 aa35.91■■■■□ 3.34
LDB1-204ENST00000490751 PKD2L1Q9P0L9 805 aa35.91■■■■□ 3.34
LDB1-204ENST00000490751 CDH23Q9H251 3354 aa35.9■■■■□ 3.34
LDB1-204ENST00000490751 FOSP01100 380 aaPredicted RBP35.9■■■■□ 3.34
LDB1-204ENST00000490751 RAB30Q15771 203 aa35.9■■■■□ 3.34
LDB1-204ENST00000490751 UTP14CQ5TAP6 766 aaKnown RBP35.9■■■■□ 3.34
LDB1-204ENST00000490751 RUFY3Q7L099 469 aa35.9■■■■□ 3.34
LDB1-204ENST00000490751 WNT8BQ93098 351 aa35.9■■■■□ 3.34
LDB1-204ENST00000490751 MSRAQ9UJ68 235 aa35.9■■■■□ 3.34
LDB1-204ENST00000490751 C17orf102A2RUQ5 167 aa35.89■■■■□ 3.34
LDB1-204ENST00000490751 SMIM10L2AP0DMW4 78 aa35.89■■■■□ 3.34
LDB1-204ENST00000490751 SMIM10L2BP0DMW5 78 aa35.89■■■■□ 3.34
LDB1-204ENST00000490751 SCG2P13521 617 aa35.89■■■■□ 3.34
LDB1-204ENST00000490751 TRIM71Q2Q1W2 868 aaKnown RBP35.89■■■■□ 3.34
LDB1-204ENST00000490751 GLT8D2Q9H1C3 349 aa35.89■■■■□ 3.34
LDB1-204ENST00000490751 ZSWIM6Q9HCJ5 1215 aa35.89■■■■□ 3.34
LDB1-204ENST00000490751 TMEM260Q9NX78 707 aa35.89■■■■□ 3.34
LDB1-204ENST00000490751 GRIN2CQ14957 1233 aa35.88■■■■□ 3.33
LDB1-204ENST00000490751 SLC17A8Q8NDX2 589 aa35.88■■■■□ 3.33
LDB1-204ENST00000490751 ZNF215Q9UL58 517 aaPredicted RBP35.88■■■■□ 3.33
LDB1-204ENST00000490751 MAFGO15525 162 aa35.87■■■■□ 3.33
LDB1-204ENST00000490751 ATP2A2P16615 1042 aaKnown RBP35.87■■■■□ 3.33
LDB1-204ENST00000490751 HOXC8P31273 242 aa35.87■■■■□ 3.33
LDB1-204ENST00000490751 CLK2P49760 499 aaKnown RBP35.87■■■■□ 3.33
LDB1-204ENST00000490751 AP3B2Q13367 1082 aa35.87■■■■□ 3.33
LDB1-204ENST00000490751 GPNMBQ14956 572 aa35.87■■■■□ 3.33
LDB1-204ENST00000490751 MXRA8Q9BRK3 442 aa35.87■■■■□ 3.33
LDB1-204ENST00000490751 PRPF3O43395 683 aaKnown RBP35.86■■■■□ 3.33
LDB1-204ENST00000490751 RABGGTBP53611 331 aa35.86■■■■□ 3.33
LDB1-204ENST00000490751 EVCP57679 992 aa35.86■■■■□ 3.33
LDB1-204ENST00000490751 SERINC5Q86VE9 423 aa35.86■■■■□ 3.33
LDB1-204ENST00000490751 ATP6V0A1Q93050 837 aa35.86■■■■□ 3.33
LDB1-204ENST00000490751 PHKBQ93100 1093 aa35.86■■■■□ 3.33
LDB1-204ENST00000490751 NKX2-4Q9H2Z4 354 aa35.86■■■■□ 3.33
LDB1-204ENST00000490751 RNPEPQ9H4A4 650 aa35.86■■■■□ 3.33
LDB1-204ENST00000490751 YBX2Q9Y2T7 364 aaKnown RBP35.86■■■■□ 3.33
LDB1-204ENST00000490751 CYP46A1Q9Y6A2 500 aa35.86■■■■□ 3.33
LDB1-204ENST00000490751 PARNO95453 639 aaKnown RBP35.85■■■■□ 3.33
LDB1-204ENST00000490751 PDIA3P30101 505 aaKnown RBP35.85■■■■□ 3.33
LDB1-204ENST00000490751 TCF7P36402 384 aaPredicted RBP35.85■■■■□ 3.33
LDB1-204ENST00000490751 PKN1Q16512 942 aa35.85■■■■□ 3.33
LDB1-204ENST00000490751 ZNF618Q5T7W0 954 aa35.85■■■■□ 3.33
LDB1-204ENST00000490751 FOSL2P15408 326 aa35.84■■■■□ 3.33
LDB1-204ENST00000490751 SREBF1P36956 1147 aa35.84■■■■□ 3.33
LDB1-204ENST00000490751 TOB2Q14106 344 aaPredicted RBP35.84■■■■□ 3.33
LDB1-204ENST00000490751 NTRK3Q16288 839 aa35.84■■■■□ 3.33
LDB1-204ENST00000490751 TRAF7Q6Q0C0 670 aa35.84■■■■□ 3.33
LDB1-204ENST00000490751 CYP2W1Q8TAV3 490 aa35.84■■■■□ 3.33
LDB1-204ENST00000490751 TM6SF1Q9BZW5 370 aa35.84■■■■□ 3.33
LDB1-204ENST00000490751 KCNH7Q9NS40 1196 aa35.84■■■■□ 3.33
LDB1-204ENST00000490751 GSTTP1A0A1W2PQM5 241 aa35.83■■■■□ 3.33
LDB1-204ENST00000490751 ESYT2A0FGR8 921 aa35.83■■■■□ 3.33
LDB1-204ENST00000490751 TREHO43280 583 aa35.83■■■■□ 3.33
LDB1-204ENST00000490751 NBNO60934 754 aa35.83■■■■□ 3.33
LDB1-204ENST00000490751 PPFIA3O75145 1194 aa35.83■■■■□ 3.33
LDB1-204ENST00000490751 CCT2P78371 535 aaKnown RBP35.83■■■■□ 3.33
LDB1-204ENST00000490751 AKAP17AQ02040 695 aaKnown RBP35.83■■■■□ 3.33
LDB1-204ENST00000490751 JAKMIP3Q5VZ66 844 aa35.83■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms