RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 SENP7Q9BQF6 1050 aa10.45□□□□□ -0.74
ECM1-205ENST00000490346 MTG1Q9BT17 334 aaPredicted RBP10.45□□□□□ -0.74
ECM1-205ENST00000490346 AGO4Q9HCK5 861 aaKnown RBP10.45□□□□□ -0.74
ECM1-205ENST00000490346 BRMS1Q9HCU9 246 aa10.45□□□□□ -0.74
ECM1-205ENST00000490346 TELO2Q9Y4R8 837 aa10.45□□□□□ -0.74
ECM1-205ENST00000490346 GRIN2DO15399 1336 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 FAM205CA6NFA0 338 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 BTBD18B2RXH4 712 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 ARVCFO00192 962 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 NOP56O00567 594 aaKnown RBP10.44□□□□□ -0.74
ECM1-205ENST00000490346 ZNF286BP0CG31 522 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 CIITAP33076 1130 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 USP11P51784 963 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 CHMP4BP1P59074 171 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 TLE2Q04725 743 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 ITGB3BPQ13352 177 aaPredicted RBP10.44□□□□□ -0.74
ECM1-205ENST00000490346 ITGA7Q13683 1181 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 INF2Q27J81 1249 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 PRR16Q569H4 304 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 EARS2Q5JPH6 523 aaKnown RBP10.44□□□□□ -0.74
ECM1-205ENST00000490346 C1orf53Q5VUE5 145 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 PIK3AP1Q6ZUJ8 805 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 DIS3L2Q8IYB7 885 aaKnown RBP10.44□□□□□ -0.74
ECM1-205ENST00000490346 GIMAP8Q8ND71 665 aaPredicted RBP10.44□□□□□ -0.74
ECM1-205ENST00000490346 PPP1R13LQ8WUF5 828 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 LENG9Q96B70 501 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 GPR20Q99678 358 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 PCDH10Q9P2E7 1040 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 ZMYND8Q9ULU4 1186 aaPredicted RBP10.44□□□□□ -0.74
ECM1-205ENST00000490346 NR2E3Q9Y5X4 410 aa10.44□□□□□ -0.74
ECM1-205ENST00000490346 SCN10AQ9Y5Y9 1956 aa10.43□□□□□ -0.74
ECM1-205ENST00000490346 H0YGN5 161 aa10.43□□□□□ -0.74
ECM1-205ENST00000490346 DDX39AO00148 427 aaKnown RBP10.43□□□□□ -0.74
ECM1-205ENST00000490346 PPFIA4O75335 1185 aa10.43□□□□□ -0.74
ECM1-205ENST00000490346 TDP2O95551 362 aa10.43□□□□□ -0.74
ECM1-205ENST00000490346 HOXD8P13378 290 aaPredicted RBP10.43□□□□□ -0.74
ECM1-205ENST00000490346 SYN1P17600 705 aa10.43□□□□□ -0.74
ECM1-205ENST00000490346 CDK7P50613 346 aa10.43□□□□□ -0.74
ECM1-205ENST00000490346 SETQ01105 290 aaPredicted RBP10.43□□□□□ -0.74
ECM1-205ENST00000490346 SAFBQ15424 915 aaKnown RBP eCLIP10.43□□□□□ -0.74
ECM1-205ENST00000490346 NBPF20Q3BBV1 942 aa10.43□□□□□ -0.74
ECM1-205ENST00000490346 SLC43A3Q8NBI5 491 aa10.43□□□□□ -0.74
ECM1-205ENST00000490346 FBXO18Q8NFZ0 1043 aa10.43□□□□□ -0.74
ECM1-205ENST00000490346 KAT2BQ92831 832 aa10.43□□□□□ -0.74
ECM1-205ENST00000490346 TNFRSF25Q93038 417 aa10.43□□□□□ -0.74
ECM1-205ENST00000490346 SDF4Q9BRK5 362 aa10.43□□□□□ -0.74
ECM1-205ENST00000490346 ZNF577Q9BSK1 485 aa10.43□□□□□ -0.74
ECM1-205ENST00000490346 JPH1Q9HDC5 661 aaPredicted RBP10.43□□□□□ -0.74
ECM1-205ENST00000490346 NFASCO94856 1347 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 MROH7Q68CQ1 1323 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 CYP3A7-CYP3A51PA0A087WV96 503 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 IPO5O00410 1097 aaKnown RBP10.42□□□□□ -0.74
ECM1-205ENST00000490346 F2P00734 622 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 LGALS2P05162 132 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 CYP3A7P24462 503 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 GJB2P29033 226 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 CUL4AQ13619 759 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 MFSD10Q14728 455 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 LETM2Q2VYF4 491 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 FAM47CQ5HY64 1035 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 UTP14CQ5TAP6 766 aaKnown RBP10.42□□□□□ -0.74
ECM1-205ENST00000490346 ANKRD33Q7Z3H0 272 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 NEK8Q86SG6 692 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 TRIM50Q86XT4 487 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 C16orf70Q9BSU1 422 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 PRDM5Q9NQX1 630 aaPredicted RBP10.42□□□□□ -0.74
ECM1-205ENST00000490346 SLC9A2Q9UBY0 812 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 SMC3Q9UQE7 1217 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 KIF3AQ9Y496 699 aa10.42□□□□□ -0.74
ECM1-205ENST00000490346 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.42□□□□□ -0.74
ECM1-205ENST00000490346 CEP290O15078 2479 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 GSTTP1A0A1W2PQM5 241 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 DCDC2CA8MYV0 355 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 H3BRB1 525 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 K7ELQ4 463 aaPredicted RBP10.41□□□□□ -0.74
ECM1-205ENST00000490346 MSH4O15457 936 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 DHX15O43143 795 aaKnown RBP10.41□□□□□ -0.74
ECM1-205ENST00000490346 SLC37A4O43826 429 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 CCNE2O96020 404 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 CLTBP09497 229 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 TCF7P36402 384 aaPredicted RBP10.41□□□□□ -0.74
ECM1-205ENST00000490346 PSEN2P49810 448 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 ACTR2P61160 394 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 FAAP100Q0VG06 881 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 KIAA0753Q2KHM9 967 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 Q4G0T1 1027 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 NFRKBQ6P4R8 1299 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 MOXD1Q6UVY6 613 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 SH3RF1Q7Z6J0 888 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 FAM126BQ8IXS8 530 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 SEPT1Q8WYJ6 367 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 GJA10Q969M2 543 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 MBOAT7Q96N66 472 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 TOX2Q96NM4 488 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 KATNAL1Q9BW62 490 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 TRPV6Q9H1D0 765 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 TUT1Q9H6E5 874 aaKnown RBP10.41□□□□□ -0.74
ECM1-205ENST00000490346 PDLIM7Q9NR12 457 aa10.41□□□□□ -0.74
ECM1-205ENST00000490346 DDX25Q9UHL0 483 aaKnown RBP10.41□□□□□ -0.74
ECM1-205ENST00000490346 TRIM43BA6NCK2 446 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms