RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 PFKFB3Q16875 520 aaPredicted RBP19.97■□□□□ 0.79
SEC13-218ENST00000490283 RASIP1Q5U651 963 aa19.97■□□□□ 0.79
SEC13-218ENST00000490283 AGXT2Q9BYV1 514 aa19.97■□□□□ 0.79
SEC13-218ENST00000490283 FTOQ9C0B1 505 aaKnown RBP eCLIP19.97■□□□□ 0.79
SEC13-218ENST00000490283 TUT1Q9H6E5 874 aaKnown RBP19.97■□□□□ 0.79
SEC13-218ENST00000490283 STXBP5LQ9Y2K9 1186 aa19.97■□□□□ 0.79
SEC13-218ENST00000490283 SZT2Q5T011 3432 aa19.96■□□□□ 0.79
SEC13-218ENST00000490283 NID2Q14112 1375 aa19.96■□□□□ 0.79
SEC13-218ENST00000490283 EIF5BO60841 1220 aaKnown RBP19.96■□□□□ 0.79
SEC13-218ENST00000490283 PARNO95453 639 aaKnown RBP19.96■□□□□ 0.79
SEC13-218ENST00000490283 IQCF3P0C7M6 154 aa19.96■□□□□ 0.79
SEC13-218ENST00000490283 DNAJB2P25686 324 aa19.96■□□□□ 0.79
SEC13-218ENST00000490283 PTK7Q13308 1070 aa19.96■□□□□ 0.79
SEC13-218ENST00000490283 MCTP2Q6DN12 878 aa19.96■□□□□ 0.79
SEC13-218ENST00000490283 GPR20Q99678 358 aa19.96■□□□□ 0.79
SEC13-218ENST00000490283 C16orf70Q9BSU1 422 aa19.96■□□□□ 0.79
SEC13-218ENST00000490283 TM6SF1Q9BZW5 370 aa19.96■□□□□ 0.79
SEC13-218ENST00000490283 ZSWIM6Q9HCJ5 1215 aa19.96■□□□□ 0.79
SEC13-218ENST00000490283 UBIAD1Q9Y5Z9 338 aa19.96■□□□□ 0.79
SEC13-218ENST00000490283 SLC4A7Q9Y6M7 1214 aa19.96■□□□□ 0.79
SEC13-218ENST00000490283 C17orf102A2RUQ5 167 aa19.95■□□□□ 0.78
SEC13-218ENST00000490283 SELPP16109 830 aa19.95■□□□□ 0.78
SEC13-218ENST00000490283 ITGB5P18084 799 aa19.95■□□□□ 0.78
SEC13-218ENST00000490283 RAB30Q15771 203 aa19.95■□□□□ 0.78
SEC13-218ENST00000490283 UTP14CQ5TAP6 766 aaKnown RBP19.95■□□□□ 0.78
SEC13-218ENST00000490283 TYW1BQ6NUM6 668 aa19.95■□□□□ 0.78
SEC13-218ENST00000490283 TIFAQ96CG3 184 aa19.95■□□□□ 0.78
SEC13-218ENST00000490283 ANO3Q9BYT9 981 aa19.95■□□□□ 0.78
SEC13-218ENST00000490283 SEMA6BQ9H3T3 888 aa19.95■□□□□ 0.78
SEC13-218ENST00000490283 C6orf50Q9HD87 102 aa19.95■□□□□ 0.78
SEC13-218ENST00000490283 JADE2Q9NQC1 790 aa19.95■□□□□ 0.78
SEC13-218ENST00000490283 MSRAQ9UJ68 235 aa19.95■□□□□ 0.78
SEC13-218ENST00000490283 PRPF3O43395 683 aaKnown RBP19.94■□□□□ 0.78
SEC13-218ENST00000490283 GNAT1P11488 350 aa19.94■□□□□ 0.78
SEC13-218ENST00000490283 ZNF76P36508 570 aa19.94■□□□□ 0.78
SEC13-218ENST00000490283 LRRC8DQ7L1W4 858 aa19.94■□□□□ 0.78
SEC13-218ENST00000490283 CCDC148Q8NFR7 591 aa19.94■□□□□ 0.78
SEC13-218ENST00000490283 RNF26Q9BY78 433 aaPredicted RBP19.94■□□□□ 0.78
SEC13-218ENST00000490283 BCAS3Q9H6U6 928 aa19.94■□□□□ 0.78
SEC13-218ENST00000490283 PKD2L1Q9P0L9 805 aa19.94■□□□□ 0.78
SEC13-218ENST00000490283 ESYT2A0FGR8 921 aa19.93■□□□□ 0.78
SEC13-218ENST00000490283 CPLX1O14810 134 aa19.93■□□□□ 0.78
SEC13-218ENST00000490283 SMIM10L2AP0DMW4 78 aa19.93■□□□□ 0.78
SEC13-218ENST00000490283 SMIM10L2BP0DMW5 78 aa19.93■□□□□ 0.78
SEC13-218ENST00000490283 KCNA2P16389 499 aa19.93■□□□□ 0.78
SEC13-218ENST00000490283 GNA11P29992 359 aa19.93■□□□□ 0.78
SEC13-218ENST00000490283 PDIA3P30101 505 aaKnown RBP19.93■□□□□ 0.78
SEC13-218ENST00000490283 CCT2P78371 535 aaKnown RBP19.93■□□□□ 0.78
SEC13-218ENST00000490283 RBL2Q08999 1139 aa19.93■□□□□ 0.78
SEC13-218ENST00000490283 CPLX2Q6PUV4 134 aaKnown RBP19.93■□□□□ 0.78
SEC13-218ENST00000490283 TRIM22Q8IYM9 498 aa19.93■□□□□ 0.78
SEC13-218ENST00000490283 BICD2Q8TD16 824 aa19.93■□□□□ 0.78
SEC13-218ENST00000490283 PHKBQ93100 1093 aa19.93■□□□□ 0.78
SEC13-218ENST00000490283 PGBD1Q96JS3 809 aa19.93■□□□□ 0.78
SEC13-218ENST00000490283 GUCD1Q96NT3 240 aa19.93■□□□□ 0.78
SEC13-218ENST00000490283 MXRA8Q9BRK3 442 aa19.93■□□□□ 0.78
SEC13-218ENST00000490283 SDF4Q9BRK5 362 aa19.93■□□□□ 0.78
SEC13-218ENST00000490283 SLC26A6Q9BXS9 759 aa19.93■□□□□ 0.78
SEC13-218ENST00000490283 CXXC1Q9P0U4 656 aaPredicted RBP19.93■□□□□ 0.78
SEC13-218ENST00000490283 CKBP12277 381 aa19.92■□□□□ 0.78
SEC13-218ENST00000490283 IFNAR1P17181 557 aa19.92■□□□□ 0.78
SEC13-218ENST00000490283 TCF7P36402 384 aaPredicted RBP19.92■□□□□ 0.78
SEC13-218ENST00000490283 SREBF1P36956 1147 aa19.92■□□□□ 0.78
SEC13-218ENST00000490283 EVCP57679 992 aa19.92■□□□□ 0.78
SEC13-218ENST00000490283 SEPT1Q8WYJ6 367 aa19.92■□□□□ 0.78
SEC13-218ENST00000490283 ATP6V0A1Q93050 837 aa19.92■□□□□ 0.78
SEC13-218ENST00000490283 CTAGE1Q96RT6 745 aa19.92■□□□□ 0.78
SEC13-218ENST00000490283 PBX4Q9BYU1 374 aa19.92■□□□□ 0.78
SEC13-218ENST00000490283 UPF3BQ9BZI7 483 aaKnown RBP19.92■□□□□ 0.78
SEC13-218ENST00000490283 PDRG1Q9NUG6 133 aa19.92■□□□□ 0.78
SEC13-218ENST00000490283 MYH7BA7E2Y1 1941 aa19.92■□□□□ 0.78
SEC13-218ENST00000490283 GRXCR1A8MXD5 290 aa19.91■□□□□ 0.78
SEC13-218ENST00000490283 ATP9AO75110 1047 aa19.91■□□□□ 0.78
SEC13-218ENST00000490283 ATP2A2P16615 1042 aaKnown RBP19.91■□□□□ 0.78
SEC13-218ENST00000490283 CLK2P49760 499 aaKnown RBP19.91■□□□□ 0.78
SEC13-218ENST00000490283 ZNF200P98182 395 aaPredicted RBP19.91■□□□□ 0.78
SEC13-218ENST00000490283 TOB2Q14106 344 aaPredicted RBP19.91■□□□□ 0.78
SEC13-218ENST00000490283 CEP55Q53EZ4 464 aa19.91■□□□□ 0.78
SEC13-218ENST00000490283 JAKMIP3Q5VZ66 844 aa19.91■□□□□ 0.78
SEC13-218ENST00000490283 TRIM50Q86XT4 487 aa19.91■□□□□ 0.78
SEC13-218ENST00000490283 REXO1Q8N1G1 1221 aaKnown RBP19.91■□□□□ 0.78
SEC13-218ENST00000490283 DHX38Q92620 1227 aaKnown RBP19.91■□□□□ 0.78
SEC13-218ENST00000490283 ZNF274Q96GC6 653 aaPredicted RBP19.91■□□□□ 0.78
SEC13-218ENST00000490283 CDX2Q99626 313 aaPredicted RBP19.91■□□□□ 0.78
SEC13-218ENST00000490283 ZMYND12Q9H0C1 365 aa19.91■□□□□ 0.78
SEC13-218ENST00000490283 TTYH1Q9H313 450 aaPredicted RBP19.91■□□□□ 0.78
SEC13-218ENST00000490283 JPH1Q9HDC5 661 aaPredicted RBP19.91■□□□□ 0.78
SEC13-218ENST00000490283 KCNH7Q9NS40 1196 aa19.91■□□□□ 0.78
SEC13-218ENST00000490283 TMEM260Q9NX78 707 aa19.91■□□□□ 0.78
SEC13-218ENST00000490283 BAIAP3O94812 1187 aa19.9■□□□□ 0.78
SEC13-218ENST00000490283 KCNJ6P48051 423 aa19.9■□□□□ 0.78
SEC13-218ENST00000490283 ARHGAP4P98171 946 aa19.9■□□□□ 0.78
SEC13-218ENST00000490283 SSRP1Q08945 709 aaKnown RBP19.9■□□□□ 0.78
SEC13-218ENST00000490283 SERINC5Q86VE9 423 aa19.9■□□□□ 0.78
SEC13-218ENST00000490283 GLG1Q92896 1179 aa19.9■□□□□ 0.78
SEC13-218ENST00000490283 ZNF576Q9H609 170 aa19.9■□□□□ 0.78
SEC13-218ENST00000490283 NCOA5Q9HCD5 579 aaKnown RBP19.9■□□□□ 0.78
SEC13-218ENST00000490283 ERAP1Q9NZ08 941 aa19.9■□□□□ 0.78
SEC13-218ENST00000490283 SLC9A2Q9UBY0 812 aa19.9■□□□□ 0.78
SEC13-218ENST00000490283 THPOP40225 353 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 259 ms