RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 ZNF654Q8IZM8 581 aa18.09■□□□□ 0.49
NUP58-213ENST00000490231 CTCFLQ8NI51 663 aaPredicted RBP18.09■□□□□ 0.49
NUP58-213ENST00000490231 ATP6V0A1Q93050 837 aa18.09■□□□□ 0.49
NUP58-213ENST00000490231 RRP36Q96EU6 259 aaKnown RBP18.09■□□□□ 0.49
NUP58-213ENST00000490231 BCAS3Q9H6U6 928 aa18.09■□□□□ 0.49
NUP58-213ENST00000490231 LY9Q9HBG7 655 aa18.09■□□□□ 0.49
NUP58-213ENST00000490231 RBM8AQ9Y5S9 174 aaKnown RBP18.09■□□□□ 0.49
NUP58-213ENST00000490231 XIRP2A4UGR9 3374 aa18.08■□□□□ 0.49
NUP58-213ENST00000490231 TET1Q8NFU7 2136 aa18.08■□□□□ 0.49
NUP58-213ENST00000490231 PIK3CDO00329 1044 aa18.08■□□□□ 0.48
NUP58-213ENST00000490231 CAND2O75155 1236 aa18.08■□□□□ 0.48
NUP58-213ENST00000490231 SMIM10L2AP0DMW4 78 aa18.08■□□□□ 0.48
NUP58-213ENST00000490231 SMIM10L2BP0DMW5 78 aa18.08■□□□□ 0.48
NUP58-213ENST00000490231 ERVK-21P61565 698 aa18.08■□□□□ 0.48
NUP58-213ENST00000490231 SEMA3FQ13275 785 aa18.08■□□□□ 0.48
NUP58-213ENST00000490231 MKRN4PQ13434 485 aaPredicted RBP18.08■□□□□ 0.48
NUP58-213ENST00000490231 PCNX4Q63HM2 1172 aa18.08■□□□□ 0.48
NUP58-213ENST00000490231 SMARCC2Q8TAQ2 1214 aa18.08■□□□□ 0.48
NUP58-213ENST00000490231 PIBF1Q8WXW3 757 aa18.08■□□□□ 0.48
NUP58-213ENST00000490231 CUL5Q93034 780 aa18.08■□□□□ 0.48
NUP58-213ENST00000490231 TGS1Q96RS0 853 aaKnown RBP18.08■□□□□ 0.48
NUP58-213ENST00000490231 GPR20Q99678 358 aa18.08■□□□□ 0.48
NUP58-213ENST00000490231 SENP7Q9BQF6 1050 aa18.08■□□□□ 0.48
NUP58-213ENST00000490231 LZTS2Q9BRK4 669 aa18.08■□□□□ 0.48
NUP58-213ENST00000490231 RNPEPQ9H4A4 650 aa18.08■□□□□ 0.48
NUP58-213ENST00000490231 LINC01553A4QN01 128 aa18.07■□□□□ 0.48
NUP58-213ENST00000490231 KCNQ1P51787 676 aa18.07■□□□□ 0.48
NUP58-213ENST00000490231 PLEKHG4Q58EX7 1191 aa18.07■□□□□ 0.48
NUP58-213ENST00000490231 CASC1Q6TDU7 716 aa18.07■□□□□ 0.48
NUP58-213ENST00000490231 CYFIP1Q7L576 1253 aa18.07■□□□□ 0.48
NUP58-213ENST00000490231 TMTC2Q8N394 836 aa18.07■□□□□ 0.48
NUP58-213ENST00000490231 DBF4BQ8NFT6 615 aa18.07■□□□□ 0.48
NUP58-213ENST00000490231 HLA-CQ95604 372 aa18.07■□□□□ 0.48
NUP58-213ENST00000490231 MYL10Q9BUA6 226 aa18.07■□□□□ 0.48
NUP58-213ENST00000490231 RTEL1Q9NZ71 1219 aa18.07■□□□□ 0.48
NUP58-213ENST00000490231 SEC63Q9UGP8 760 aaKnown RBP18.07■□□□□ 0.48
NUP58-213ENST00000490231 INSL6Q9Y581 213 aa18.07■□□□□ 0.48
NUP58-213ENST00000490231 PTPRSQ13332 1948 aa18.07■□□□□ 0.48
NUP58-213ENST00000490231 TRIP12Q14669 1992 aaPredicted RBP18.06■□□□□ 0.48
NUP58-213ENST00000490231 MEIS2O14770 477 aa18.06■□□□□ 0.48
NUP58-213ENST00000490231 TREHO43280 583 aa18.06■□□□□ 0.48
NUP58-213ENST00000490231 AMHP03971 560 aa18.06■□□□□ 0.48
NUP58-213ENST00000490231 GNAT1P11488 350 aa18.06■□□□□ 0.48
NUP58-213ENST00000490231 GNAQP50148 359 aa18.06■□□□□ 0.48
NUP58-213ENST00000490231 USP17L6PQ6QN14 398 aa18.06■□□□□ 0.48
NUP58-213ENST00000490231 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.06■□□□□ 0.48
NUP58-213ENST00000490231 GDPD5Q8WTR4 605 aa18.06■□□□□ 0.48
NUP58-213ENST00000490231 TMEM87BQ96K49 555 aa18.06■□□□□ 0.48
NUP58-213ENST00000490231 SUGCTQ9HAC7 445 aa18.06■□□□□ 0.48
NUP58-213ENST00000490231 ZNF215Q9UL58 517 aaPredicted RBP18.06■□□□□ 0.48
NUP58-213ENST00000490231 REV3LO60673 3130 aa18.05■□□□□ 0.48
NUP58-213ENST00000490231 PRC1O43663 620 aa18.05■□□□□ 0.48
NUP58-213ENST00000490231 MCM5P33992 734 aa18.05■□□□□ 0.48
NUP58-213ENST00000490231 HTRA4P83105 476 aaPredicted RBP18.05■□□□□ 0.48
NUP58-213ENST00000490231 NLRX1Q86UT6 975 aa18.05■□□□□ 0.48
NUP58-213ENST00000490231 GIMAP8Q8ND71 665 aaPredicted RBP18.05■□□□□ 0.48
NUP58-213ENST00000490231 NECAB3Q96P71 396 aaPredicted RBP18.05■□□□□ 0.48
NUP58-213ENST00000490231 CCDC69A6NI79 296 aa18.04■□□□□ 0.48
NUP58-213ENST00000490231 SH2B2O14492 632 aaPredicted RBP18.04■□□□□ 0.48
NUP58-213ENST00000490231 CALM1P0DP23 149 aa18.04■□□□□ 0.48
NUP58-213ENST00000490231 CALM2P0DP24 149 aa18.04■□□□□ 0.48
NUP58-213ENST00000490231 CALM3P0DP25 149 aa18.04■□□□□ 0.48
NUP58-213ENST00000490231 LIFRP42702 1097 aa18.04■□□□□ 0.48
NUP58-213ENST00000490231 ADAM17P78536 824 aa18.04■□□□□ 0.48
NUP58-213ENST00000490231 FAM117BQ6P1L5 589 aa18.04■□□□□ 0.48
NUP58-213ENST00000490231 MYOCDQ8IZQ8 938 aa18.04■□□□□ 0.48
NUP58-213ENST00000490231 SRBD1Q8N5C6 995 aaKnown RBP18.04■□□□□ 0.48
NUP58-213ENST00000490231 SP7Q8TDD2 431 aaPredicted RBP18.04■□□□□ 0.48
NUP58-213ENST00000490231 SEPT8Q92599 483 aa18.04■□□□□ 0.48
NUP58-213ENST00000490231 LSG1Q9H089 658 aaKnown RBP18.04■□□□□ 0.48
NUP58-213ENST00000490231 SETD4Q9NVD3 440 aa18.04■□□□□ 0.48
NUP58-213ENST00000490231 MTUS1Q9ULD2 1270 aa18.04■□□□□ 0.48
NUP58-213ENST00000490231 MYO9BQ13459 2157 aa18.04■□□□□ 0.48
NUP58-213ENST00000490231 MYH7BA7E2Y1 1941 aa18.04■□□□□ 0.48
NUP58-213ENST00000490231 COL4A4P53420 1690 aaPredicted RBP18.03■□□□□ 0.48
NUP58-213ENST00000490231 PLEKHA8P1O95397 391 aa18.03■□□□□ 0.48
NUP58-213ENST00000490231 NFXL1Q6ZNB6 911 aa18.03■□□□□ 0.48
NUP58-213ENST00000490231 TRIM50Q86XT4 487 aa18.03■□□□□ 0.48
NUP58-213ENST00000490231 GPRASP2Q96D09 838 aa18.03■□□□□ 0.48
NUP58-213ENST00000490231 CDHR1Q96JP9 859 aa18.03■□□□□ 0.48
NUP58-213ENST00000490231 NRCAMQ92823 1304 aa18.02■□□□□ 0.48
NUP58-213ENST00000490231 CTSHP09668 335 aa18.02■□□□□ 0.48
NUP58-213ENST00000490231 COL9A1P20849 921 aa18.02■□□□□ 0.48
NUP58-213ENST00000490231 IRX6P78412 446 aaPredicted RBP18.02■□□□□ 0.48
NUP58-213ENST00000490231 FAM26DQ5JW98 314 aa18.02■□□□□ 0.48
NUP58-213ENST00000490231 UTP14CQ5TAP6 766 aaKnown RBP18.02■□□□□ 0.48
NUP58-213ENST00000490231 LMBR1Q8WVP7 490 aa18.02■□□□□ 0.48
NUP58-213ENST00000490231 APBB2Q92870 758 aa18.02■□□□□ 0.48
NUP58-213ENST00000490231 TOP1MTQ969P6 601 aa18.02■□□□□ 0.48
NUP58-213ENST00000490231 PSTPIP2Q9H939 334 aa18.02■□□□□ 0.48
NUP58-213ENST00000490231 TELO2Q9Y4R8 837 aa18.02■□□□□ 0.48
NUP58-213ENST00000490231 PRRC2BQ5JSZ5 2229 aaKnown RBP18.02■□□□□ 0.47
NUP58-213ENST00000490231 RBAK-RBAKDNI3L0D1 243 aa18.01■□□□□ 0.47
NUP58-213ENST00000490231 SLC27A2O14975 620 aa18.01■□□□□ 0.47
NUP58-213ENST00000490231 KCNA2P16389 499 aa18.01■□□□□ 0.47
NUP58-213ENST00000490231 TCF7P36402 384 aaPredicted RBP18.01■□□□□ 0.47
NUP58-213ENST00000490231 ARHGAP4P98171 946 aa18.01■□□□□ 0.47
NUP58-213ENST00000490231 SP4Q02446 784 aa18.01■□□□□ 0.47
NUP58-213ENST00000490231 RPAINQ86UA6 219 aa18.01■□□□□ 0.47
NUP58-213ENST00000490231 CMTR1Q8N1G2 835 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms