RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 EMSYQ7Z589 1322 aa12.4□□□□□ -0.42
UBP1-211ENST00000490112 HAS3O00219 553 aa12.4□□□□□ -0.42
UBP1-211ENST00000490112 HOXD8P13378 290 aaPredicted RBP12.4□□□□□ -0.42
UBP1-211ENST00000490112 COL9A1P20849 921 aa12.4□□□□□ -0.42
UBP1-211ENST00000490112 KIAA0753Q2KHM9 967 aa12.4□□□□□ -0.42
UBP1-211ENST00000490112 MYSM1Q5VVJ2 828 aa12.4□□□□□ -0.42
UBP1-211ENST00000490112 VSIG10LQ86VR7 867 aa12.4□□□□□ -0.42
UBP1-211ENST00000490112 PPP1R13LQ8WUF5 828 aa12.4□□□□□ -0.42
UBP1-211ENST00000490112 HLA-CQ95604 372 aa12.4□□□□□ -0.42
UBP1-211ENST00000490112 MTMR8Q96EF0 704 aa12.4□□□□□ -0.42
UBP1-211ENST00000490112 CTAGE1Q96RT6 745 aa12.4□□□□□ -0.42
UBP1-211ENST00000490112 PDCD2LQ9BRP1 358 aa12.4□□□□□ -0.42
UBP1-211ENST00000490112 C1QTNF1Q9BXJ1 281 aa12.4□□□□□ -0.42
UBP1-211ENST00000490112 CERS4Q9HA82 394 aa12.4□□□□□ -0.42
UBP1-211ENST00000490112 ERICH2A1L162 156 aa12.39□□□□□ -0.43
UBP1-211ENST00000490112 PALM3A6NDB9 673 aaPredicted RBP12.39□□□□□ -0.43
UBP1-211ENST00000490112 GCOM1H8Y6P7 765 aaPredicted RBP12.39□□□□□ -0.43
UBP1-211ENST00000490112 STAM2O75886 525 aa12.39□□□□□ -0.43
UBP1-211ENST00000490112 POLR2MP0CAP2 368 aa12.39□□□□□ -0.43
UBP1-211ENST00000490112 MYCLP12524 364 aaPredicted RBP12.39□□□□□ -0.43
UBP1-211ENST00000490112 CCND2P30279 289 aa12.39□□□□□ -0.43
UBP1-211ENST00000490112 SART3Q15020 963 aaKnown RBP12.39□□□□□ -0.43
UBP1-211ENST00000490112 SEC23AQ15436 765 aa12.39□□□□□ -0.43
UBP1-211ENST00000490112 CELF3Q5SZQ8 465 aaKnown RBP12.39□□□□□ -0.43
UBP1-211ENST00000490112 RUFY2Q8WXA3 655 aa12.39□□□□□ -0.43
UBP1-211ENST00000490112 DHX38Q92620 1227 aaKnown RBP12.39□□□□□ -0.43
UBP1-211ENST00000490112 SPATA33Q96N06 139 aa12.39□□□□□ -0.43
UBP1-211ENST00000490112 ALG1Q9BT22 464 aa12.39□□□□□ -0.43
UBP1-211ENST00000490112 MAD2L2Q9UI95 211 aa12.39□□□□□ -0.43
UBP1-211ENST00000490112 PRRC2BQ5JSZ5 2229 aaKnown RBP12.39□□□□□ -0.43
UBP1-211ENST00000490112 TET1Q8NFU7 2136 aa12.38□□□□□ -0.43
UBP1-211ENST00000490112 RFXAPO00287 272 aa12.38□□□□□ -0.43
UBP1-211ENST00000490112 NBNO60934 754 aa12.38□□□□□ -0.43
UBP1-211ENST00000490112 GJB5O95377 273 aa12.38□□□□□ -0.43
UBP1-211ENST00000490112 IGHDP01880 384 aa12.38□□□□□ -0.43
UBP1-211ENST00000490112 TFF2Q03403 129 aa12.38□□□□□ -0.43
UBP1-211ENST00000490112 GRB10Q13322 594 aa12.38□□□□□ -0.43
UBP1-211ENST00000490112 GPNMBQ14956 572 aa12.38□□□□□ -0.43
UBP1-211ENST00000490112 PGM5Q15124 567 aa12.38□□□□□ -0.43
UBP1-211ENST00000490112 GNPTABQ3T906 1256 aa12.38□□□□□ -0.43
UBP1-211ENST00000490112 STAG2Q8N3U4 1231 aa12.38□□□□□ -0.43
UBP1-211ENST00000490112 MLXIPQ9HAP2 919 aa12.38□□□□□ -0.43
UBP1-211ENST00000490112 INSL6Q9Y581 213 aa12.38□□□□□ -0.43
UBP1-211ENST00000490112 MYH7BA7E2Y1 1941 aa12.38□□□□□ -0.43
UBP1-211ENST00000490112 PNMA6FA0A0J9YX94 578 aa12.37□□□□□ -0.43
UBP1-211ENST00000490112 EPOPA6NHQ4 379 aa12.37□□□□□ -0.43
UBP1-211ENST00000490112 OPLAHO14841 1288 aa12.37□□□□□ -0.43
UBP1-211ENST00000490112 CAND2O75155 1236 aa12.37□□□□□ -0.43
UBP1-211ENST00000490112 LGR5O75473 907 aa12.37□□□□□ -0.43
UBP1-211ENST00000490112 GGPS1O95749 300 aa12.37□□□□□ -0.43
UBP1-211ENST00000490112 ZNF286BP0CG31 522 aa12.37□□□□□ -0.43
UBP1-211ENST00000490112 GNAT1P11488 350 aa12.37□□□□□ -0.43
UBP1-211ENST00000490112 TGS1Q96RS0 853 aaKnown RBP12.37□□□□□ -0.43
UBP1-211ENST00000490112 KCNK17Q96T54 332 aa12.37□□□□□ -0.43
UBP1-211ENST00000490112 USP26Q9BXU7 913 aa12.37□□□□□ -0.43
UBP1-211ENST00000490112 RIOX1Q9H6W3 641 aa12.37□□□□□ -0.43
UBP1-211ENST00000490112 RSPH10B2B2RC85 870 aa12.36□□□□□ -0.43
UBP1-211ENST00000490112 H3BRB1 525 aa12.36□□□□□ -0.43
UBP1-211ENST00000490112 NOP56O00567 594 aaKnown RBP12.36□□□□□ -0.43
UBP1-211ENST00000490112 IFIT3O14879 490 aaKnown RBP12.36□□□□□ -0.43
UBP1-211ENST00000490112 RGS20O76081 388 aa12.36□□□□□ -0.43
UBP1-211ENST00000490112 AMHP03971 560 aa12.36□□□□□ -0.43
UBP1-211ENST00000490112 RSPH10BP0C881 870 aa12.36□□□□□ -0.43
UBP1-211ENST00000490112 HOXA13P31271 388 aaPredicted RBP12.36□□□□□ -0.43
UBP1-211ENST00000490112 THPOP40225 353 aa12.36□□□□□ -0.43
UBP1-211ENST00000490112 KCNQ1P51787 676 aa12.36□□□□□ -0.43
UBP1-211ENST00000490112 ERVK-21P61565 698 aa12.36□□□□□ -0.43
UBP1-211ENST00000490112 NEDD9Q14511 834 aa12.36□□□□□ -0.43
UBP1-211ENST00000490112 GRM4Q14833 912 aa12.36□□□□□ -0.43
UBP1-211ENST00000490112 TRIM71Q2Q1W2 868 aaKnown RBP12.36□□□□□ -0.43
UBP1-211ENST00000490112 HSDL1Q3SXM5 330 aa12.36□□□□□ -0.43
UBP1-211ENST00000490112 ZNF618Q5T7W0 954 aa12.36□□□□□ -0.43
UBP1-211ENST00000490112 RALYLQ86SE5 291 aaKnown RBP12.36□□□□□ -0.43
UBP1-211ENST00000490112 SERINC5Q86VE9 423 aa12.36□□□□□ -0.43
UBP1-211ENST00000490112 HOMER1Q86YM7 354 aa12.36□□□□□ -0.43
UBP1-211ENST00000490112 TUT1Q9H6E5 874 aaKnown RBP12.36□□□□□ -0.43
UBP1-211ENST00000490112 C17orf102A2RUQ5 167 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 LCHNA4D1U4 455 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 LPXNO60711 386 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 PPP1R11O60927 126 aaPredicted RBP12.35□□□□□ -0.43
UBP1-211ENST00000490112 ARHGEF15O94989 841 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 UBA1P22314 1058 aaKnown RBP12.35□□□□□ -0.43
UBP1-211ENST00000490112 DEFB103AP81534 67 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 WTAPQ15007 396 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 XRRA1Q6P2D8 792 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 TRAF7Q6Q0C0 670 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 CYB5R4Q7L1T6 521 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 CATIPQ7Z7H3 387 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 FCHSD1Q86WN1 690 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 NCOA7Q8NI08 942 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 ATP6V0A1Q93050 837 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 SAMD11Q96NU1 681 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 PIGSQ96S52 555 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 MAP3K14Q99558 947 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 C16orf70Q9BSU1 422 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 TCF20Q9UGU0 1960 aaKnown RBP12.35□□□□□ -0.43
UBP1-211ENST00000490112 PTPRSQ13332 1948 aa12.35□□□□□ -0.43
UBP1-211ENST00000490112 LINC01553A4QN01 128 aa12.34□□□□□ -0.43
UBP1-211ENST00000490112 HOXC8P31273 242 aa12.34□□□□□ -0.43
UBP1-211ENST00000490112 ICAM3P32942 547 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms