RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 TM4SF4P48230 202 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 AMPD3Q01432 767 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 MTMR1Q13613 665 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 TAF1CQ15572 869 aaPredicted RBP13.1□□□□□ -0.31
TRIM40-208ENST00000489892 STXBP2Q15833 593 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 LRCH2Q5VUJ6 765 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 CABP7Q86V35 215 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 VSIG10LQ86VR7 867 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 RNF214Q8ND24 703 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 NEK9Q8TD19 979 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 HAS1Q92839 578 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 SLC5A5Q92911 643 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 LENG9Q96B70 501 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 EPSTI1Q96J88 318 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 TAAR1Q96RJ0 339 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 ZNF577Q9BSK1 485 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 TEKT3Q9BXF9 490 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 ZFYVE28Q9HCC9 887 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 MRVI1Q9Y6F6 885 aa13.1□□□□□ -0.31
TRIM40-208ENST00000489892 GPR25O00155 361 aa13.09□□□□□ -0.31
TRIM40-208ENST00000489892 IPO5O00410 1097 aaKnown RBP13.09□□□□□ -0.31
TRIM40-208ENST00000489892 MSH4O15457 936 aa13.09□□□□□ -0.31
TRIM40-208ENST00000489892 EDIL3O43854 480 aa13.09□□□□□ -0.31
TRIM40-208ENST00000489892 EIF3JO75822 258 aaKnown RBP13.09□□□□□ -0.31
TRIM40-208ENST00000489892 MYCLP12524 364 aaPredicted RBP13.09□□□□□ -0.31
TRIM40-208ENST00000489892 MUTP22033 750 aa13.09□□□□□ -0.31
TRIM40-208ENST00000489892 GRIN1Q05586 938 aa13.09□□□□□ -0.31
TRIM40-208ENST00000489892 PDE4DQ08499 809 aa13.09□□□□□ -0.31
TRIM40-208ENST00000489892 PPP2R5CQ13362 524 aa13.09□□□□□ -0.31
TRIM40-208ENST00000489892 IL17AQ16552 155 aa13.09□□□□□ -0.31
TRIM40-208ENST00000489892 WDR78Q5VTH9 848 aa13.09□□□□□ -0.31
TRIM40-208ENST00000489892 KCNV1Q6PIU1 500 aa13.09□□□□□ -0.31
TRIM40-208ENST00000489892 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.09□□□□□ -0.31
TRIM40-208ENST00000489892 IFNL1Q8IU54 200 aa13.09□□□□□ -0.31
TRIM40-208ENST00000489892 GIMAP8Q8ND71 665 aaPredicted RBP13.09□□□□□ -0.31
TRIM40-208ENST00000489892 CCDC47Q96A33 483 aaKnown RBP13.09□□□□□ -0.31
TRIM40-208ENST00000489892 DHX58Q96C10 678 aa13.09□□□□□ -0.31
TRIM40-208ENST00000489892 NAT10Q9H0A0 1025 aaKnown RBP13.09□□□□□ -0.31
TRIM40-208ENST00000489892 TXNRD2Q9NNW7 524 aa13.09□□□□□ -0.31
TRIM40-208ENST00000489892 A0A0C4DFX4 3053 aa13.09□□□□□ -0.31
TRIM40-208ENST00000489892 ASB14A6NK59 587 aa13.08□□□□□ -0.32
TRIM40-208ENST00000489892 ALDH5A1P51649 535 aaPredicted RBP13.08□□□□□ -0.32
TRIM40-208ENST00000489892 KRT76Q01546 638 aa13.08□□□□□ -0.32
TRIM40-208ENST00000489892 POSTNQ15063 836 aa13.08□□□□□ -0.32
TRIM40-208ENST00000489892 CAMK4Q16566 473 aa13.08□□□□□ -0.32
TRIM40-208ENST00000489892 SPECC1Q5M775 1068 aa13.08□□□□□ -0.32
TRIM40-208ENST00000489892 ANKRD13CQ8N6S4 541 aa13.08□□□□□ -0.32
TRIM40-208ENST00000489892 PDILTQ8N807 584 aa13.08□□□□□ -0.32
TRIM40-208ENST00000489892 FAM133AQ8N9E0 248 aa13.08□□□□□ -0.32
TRIM40-208ENST00000489892 TRIML1Q8N9V2 468 aa13.08□□□□□ -0.32
TRIM40-208ENST00000489892 RDM1Q8NG50 284 aa13.08□□□□□ -0.32
TRIM40-208ENST00000489892 SNX29Q8TEQ0 813 aa13.08□□□□□ -0.32
TRIM40-208ENST00000489892 INPP4AQ96PE3 977 aaPredicted RBP13.08□□□□□ -0.32
TRIM40-208ENST00000489892 KCNH7Q9NS40 1196 aa13.08□□□□□ -0.32
TRIM40-208ENST00000489892 ANO10Q9NW15 660 aa13.08□□□□□ -0.32
TRIM40-208ENST00000489892 KIAA1468Q9P260 1216 aa13.08□□□□□ -0.32
TRIM40-208ENST00000489892 DNAJC25-GNG10A0A024R161 153 aa13.07□□□□□ -0.32
TRIM40-208ENST00000489892 ACTN4O43707 911 aaKnown RBP13.07□□□□□ -0.32
TRIM40-208ENST00000489892 FKTNO75072 461 aa13.07□□□□□ -0.32
TRIM40-208ENST00000489892 TGFB3P10600 412 aa13.07□□□□□ -0.32
TRIM40-208ENST00000489892 ITGB5P18084 799 aa13.07□□□□□ -0.32
TRIM40-208ENST00000489892 SFNP31947 248 aa13.07□□□□□ -0.32
TRIM40-208ENST00000489892 CCT6AP40227 531 aaKnown RBP13.07□□□□□ -0.32
TRIM40-208ENST00000489892 JAK3P52333 1124 aa13.07□□□□□ -0.32
TRIM40-208ENST00000489892 UBXN2AP68543 259 aa13.07□□□□□ -0.32
TRIM40-208ENST00000489892 STX1AQ16623 288 aa13.07□□□□□ -0.32
TRIM40-208ENST00000489892 LONRF3Q496Y0 759 aa13.07□□□□□ -0.32
TRIM40-208ENST00000489892 HYIQ5T013 277 aa13.07□□□□□ -0.32
TRIM40-208ENST00000489892 FBXO46Q6PJ61 603 aaPredicted RBP13.07□□□□□ -0.32
TRIM40-208ENST00000489892 POTEEQ6S8J3 1075 aa13.07□□□□□ -0.32
TRIM40-208ENST00000489892 ZNF467Q7Z7K2 595 aaPredicted RBP13.07□□□□□ -0.32
TRIM40-208ENST00000489892 PTPN18Q99952 460 aa13.07□□□□□ -0.32
TRIM40-208ENST00000489892 AGO4Q9HCK5 861 aaKnown RBP13.07□□□□□ -0.32
TRIM40-208ENST00000489892 TUFT1Q9NNX1 390 aa13.07□□□□□ -0.32
TRIM40-208ENST00000489892 RMND1Q9NWS8 449 aa13.07□□□□□ -0.32
TRIM40-208ENST00000489892 DACH1Q9UI36 760 aa13.07□□□□□ -0.32
TRIM40-208ENST00000489892 DIS3Q9Y2L1 958 aaKnown RBP13.07□□□□□ -0.32
TRIM40-208ENST00000489892 MKI67P46013 3256 aaKnown RBP13.07□□□□□ -0.32
TRIM40-208ENST00000489892 POTEMA6NI47 508 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 SLC15A5A6NIM6 579 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 GTPBP6O43824 516 aaPredicted RBP13.06□□□□□ -0.32
TRIM40-208ENST00000489892 TLR2O60603 784 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 DKC1O60832 514 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRIM40-208ENST00000489892 PSMD10O75832 226 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 ADCY5O95622 1261 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 EDNRBP24530 442 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 RPA1P27694 616 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 ICAM3P32942 547 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 MRPS9P82933 396 aaKnown RBP13.06□□□□□ -0.32
TRIM40-208ENST00000489892 TYRO3Q06418 890 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 KARSQ15046 597 aaKnown RBP13.06□□□□□ -0.32
TRIM40-208ENST00000489892 E2F4Q16254 413 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 NCAPH2Q6IBW4 605 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 USP49Q70CQ1 688 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 PLEKHH3Q7Z736 793 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 MSL3Q8N5Y2 521 aaKnown RBP13.06□□□□□ -0.32
TRIM40-208ENST00000489892 IL31RAQ8NI17 732 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 SMARCE1Q969G3 411 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 GSDMAQ96QA5 445 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 POLR3CQ9BUI4 534 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms