RNA–Protein interactions for RNA: ENST00000489769.1

SERPINA1-210, Transcript of serpin family A member 1, humanhuman

TSL 1 (best)

Gene SERPINA1, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-210ENST00000489769 FIBPO43427 364 aa12.96□□□□□ -0.33
SERPINA1-210ENST00000489769 PRPF40AO75400 957 aaKnown RBP12.96□□□□□ -0.33
SERPINA1-210ENST00000489769 UBA1P22314 1058 aaKnown RBP12.96□□□□□ -0.33
SERPINA1-210ENST00000489769 ICAM3P32942 547 aa12.96□□□□□ -0.33
SERPINA1-210ENST00000489769 CSPP1Q1MSJ5 1256 aa12.96□□□□□ -0.33
SERPINA1-210ENST00000489769 NEK8Q86SG6 692 aa12.96□□□□□ -0.33
SERPINA1-210ENST00000489769 FERMT3Q86UX7 667 aa12.96□□□□□ -0.33
SERPINA1-210ENST00000489769 NOSTRINQ8IVI9 506 aa12.96□□□□□ -0.33
SERPINA1-210ENST00000489769 OR6J1Q8NGC5 347 aa12.96□□□□□ -0.33
SERPINA1-210ENST00000489769 GJA10Q969M2 543 aa12.96□□□□□ -0.33
SERPINA1-210ENST00000489769 GPRASP2Q96D09 838 aa12.96□□□□□ -0.33
SERPINA1-210ENST00000489769 CRISPLD2Q9H0B8 497 aa12.96□□□□□ -0.33
SERPINA1-210ENST00000489769 AP5M1Q9H0R1 490 aa12.96□□□□□ -0.33
SERPINA1-210ENST00000489769 OGDHLQ9ULD0 1010 aa12.96□□□□□ -0.33
SERPINA1-210ENST00000489769 TELO2Q9Y4R8 837 aa12.96□□□□□ -0.33
SERPINA1-210ENST00000489769 MYH15Q9Y2K3 1946 aa12.96□□□□□ -0.33
SERPINA1-210ENST00000489769 CCNT1O60563 726 aaKnown RBP12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 GGPS1O95749 300 aa12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 PDIA4P13667 645 aaKnown RBP12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 NCLP19338 710 aaKnown RBP12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 PDCP20941 246 aa12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 CIITAP33076 1130 aa12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 SP4Q02446 784 aa12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 ARHGAP1Q07960 439 aa12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 LRRC41Q15345 812 aa12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 GNASQ5JWF2 1037 aa12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 FOXD4L5Q5VV16 416 aaPredicted RBP12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 KCNV1Q6PIU1 500 aa12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 CYFIP1Q7L576 1253 aa12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 DHX37Q8IY37 1157 aaKnown RBP12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 TMEM87AQ8NBN3 555 aa12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 GPT2Q8TD30 523 aa12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 DIS3LQ8TF46 1054 aaKnown RBP12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 FOXD4L4Q8WXT5 416 aaPredicted RBP12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 CCDC39Q9UFE4 941 aa12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 KAT6AQ92794 2004 aa12.95□□□□□ -0.34
SERPINA1-210ENST00000489769 CTAGE5O15320 804 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 SLC37A4O43826 429 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 ADAMTS4O75173 837 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 GH1P01241 217 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 TGFB3P10600 412 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 KCNA2P16389 499 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 U2AF2P26368 475 aaKnown RBP eCLIP12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 GJA9P57773 515 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 CELF3Q5SZQ8 465 aaKnown RBP12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 MYSM1Q5VVJ2 828 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 ARRDC4Q8NCT1 418 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 AFG1LQ8WV93 481 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 LENG9Q96B70 501 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 UPF3AQ9H1J1 476 aaKnown RBP12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 MLXIPQ9HAP2 919 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 SPC25Q9HBM1 224 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 AGO4Q9HCK5 861 aaKnown RBP12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 TRIP12Q14669 1992 aaPredicted RBP12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 TCHHQ07283 1943 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 DDX39AO00148 427 aaKnown RBP12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 NKRFO15226 690 aaKnown RBP eCLIP12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 MSH4O15457 936 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 STX6O43752 255 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 LETM1O95202 739 aaPredicted RBP12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 MNX1P50219 401 aaPredicted RBP12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 ITGB3BPQ13352 177 aaPredicted RBP12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 PKP1Q13835 747 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 HSP90AA2PQ14568 343 aaPredicted RBP12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 ZNF174Q15697 407 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 KCNA10Q16322 511 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 FSCN1Q16658 493 aaKnown RBP12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 UVSSAQ2YD98 709 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 NIPA1Q7RTP0 329 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 RNF180Q86T96 592 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 FERMT2Q96AC1 680 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 CDHR1Q96JP9 859 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 SPATA33Q96N06 139 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 ZNF577Q9BSK1 485 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 RBSNQ9H1K0 784 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 DDX25Q9UHL0 483 aaKnown RBP12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 Q9Y3F1 56 aa12.94□□□□□ -0.34
SERPINA1-210ENST00000489769 MKI67P46013 3256 aaKnown RBP12.93□□□□□ -0.34
SERPINA1-210ENST00000489769 CYP3A7-CYP3A51PA0A087WV96 503 aa12.93□□□□□ -0.34
SERPINA1-210ENST00000489769 IPO5O00410 1097 aaKnown RBP12.93□□□□□ -0.34
SERPINA1-210ENST00000489769 MAFGO15525 162 aa12.93□□□□□ -0.34
SERPINA1-210ENST00000489769 CYP3A7P24462 503 aa12.93□□□□□ -0.34
SERPINA1-210ENST00000489769 TOB1P50616 345 aaPredicted RBP12.93□□□□□ -0.34
SERPINA1-210ENST00000489769 NEDD9Q14511 834 aa12.93□□□□□ -0.34
SERPINA1-210ENST00000489769 HSDL1Q3SXM5 330 aa12.93□□□□□ -0.34
SERPINA1-210ENST00000489769 Q4G0T1 1027 aa12.93□□□□□ -0.34
SERPINA1-210ENST00000489769 KLHDC9Q8NEP7 349 aa12.93□□□□□ -0.34
SERPINA1-210ENST00000489769 PAWRQ96IZ0 340 aaKnown RBP12.93□□□□□ -0.34
SERPINA1-210ENST00000489769 MTMR6Q9Y217 621 aa12.93□□□□□ -0.34
SERPINA1-210ENST00000489769 ALPK3Q96L96 1907 aa12.92□□□□□ -0.34
SERPINA1-210ENST00000489769 KBTBD13C9JR72 458 aa12.92□□□□□ -0.34
SERPINA1-210ENST00000489769 FARP2O94887 1054 aaPredicted RBP12.92□□□□□ -0.34
SERPINA1-210ENST00000489769 ASGR1P07306 291 aa12.92□□□□□ -0.34
SERPINA1-210ENST00000489769 MYL3P08590 195 aa12.92□□□□□ -0.34
SERPINA1-210ENST00000489769 MCM7P33993 719 aa12.92□□□□□ -0.34
SERPINA1-210ENST00000489769 CHMP4BP1P59074 171 aa12.92□□□□□ -0.34
SERPINA1-210ENST00000489769 LAMC2Q13753 1193 aa12.92□□□□□ -0.34
SERPINA1-210ENST00000489769 CCSAPQ6IQ19 270 aaPredicted RBP12.92□□□□□ -0.34
SERPINA1-210ENST00000489769 POTEDQ86YR6 584 aa12.92□□□□□ -0.34
SERPINA1-210ENST00000489769 PPP1R13LQ8WUF5 828 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms