RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 C5orf67F2Z3F1 127 aa18.87■□□□□ 0.61
USP48-210ENST00000489108 H3BRB1 525 aa18.87■□□□□ 0.61
USP48-210ENST00000489108 RB1P06400 928 aa18.87■□□□□ 0.61
USP48-210ENST00000489108 SMIM10L2AP0DMW4 78 aa18.87■□□□□ 0.61
USP48-210ENST00000489108 SMIM10L2BP0DMW5 78 aa18.87■□□□□ 0.61
USP48-210ENST00000489108 HOXC8P31273 242 aa18.87■□□□□ 0.61
USP48-210ENST00000489108 BMPR1AP36894 532 aa18.87■□□□□ 0.61
USP48-210ENST00000489108 KCNV1Q6PIU1 500 aa18.87■□□□□ 0.61
USP48-210ENST00000489108 DGKHQ86XP1 1220 aa18.87■□□□□ 0.61
USP48-210ENST00000489108 TBC1D10CQ8IV04 446 aa18.87■□□□□ 0.61
USP48-210ENST00000489108 PNMA1Q8ND90 353 aa18.87■□□□□ 0.61
USP48-210ENST00000489108 ZFP91Q96JP5 570 aaPredicted RBP18.87■□□□□ 0.61
USP48-210ENST00000489108 PDCD2LQ9BRP1 358 aa18.87■□□□□ 0.61
USP48-210ENST00000489108 TUT1Q9H6E5 874 aaKnown RBP18.87■□□□□ 0.61
USP48-210ENST00000489108 JMJD4Q9H9V9 463 aa18.87■□□□□ 0.61
USP48-210ENST00000489108 COL4A6Q14031 1691 aa18.86■□□□□ 0.61
USP48-210ENST00000489108 STXBP3O00186 592 aa18.86■□□□□ 0.61
USP48-210ENST00000489108 OPLAHO14841 1288 aa18.86■□□□□ 0.61
USP48-210ENST00000489108 DHX16O60231 1041 aaKnown RBP18.86■□□□□ 0.61
USP48-210ENST00000489108 LINC00271P0C7V0 271 aa18.86■□□□□ 0.61
USP48-210ENST00000489108 HSD17B4P51659 736 aa18.86■□□□□ 0.61
USP48-210ENST00000489108 BMP8AQ7Z5Y6 402 aa18.86■□□□□ 0.61
USP48-210ENST00000489108 VSIG10LQ86VR7 867 aa18.86■□□□□ 0.61
USP48-210ENST00000489108 GPKOWQ92917 476 aaPredicted RBP eCLIP18.86■□□□□ 0.617e-6■□□□□ 8.1
USP48-210ENST00000489108 LMAN2LQ9H0V9 348 aa18.86■□□□□ 0.61
USP48-210ENST00000489108 BCAS3Q9H6U6 928 aa18.86■□□□□ 0.61
USP48-210ENST00000489108 MLXIPQ9HAP2 919 aa18.86■□□□□ 0.61
USP48-210ENST00000489108 SALL3Q9BXA9 1300 aa18.85■□□□□ 0.61
USP48-210ENST00000489108 LINC01565O15544 149 aa18.85■□□□□ 0.61
USP48-210ENST00000489108 TBX10O75333 385 aa18.85■□□□□ 0.61
USP48-210ENST00000489108 CSPG5O95196 566 aa18.85■□□□□ 0.61
USP48-210ENST00000489108 PCP11498 1178 aaKnown RBP18.85■□□□□ 0.61
USP48-210ENST00000489108 UBA1P22314 1058 aaKnown RBP18.85■□□□□ 0.61
USP48-210ENST00000489108 SMAD4Q13485 552 aaKnown RBP18.85■□□□□ 0.61
USP48-210ENST00000489108 ZNF589Q86UQ0 364 aaPredicted RBP18.85■□□□□ 0.61
USP48-210ENST00000489108 ESR2Q92731 530 aa18.85■□□□□ 0.61
USP48-210ENST00000489108 PBXIP1Q96AQ6 731 aa18.85■□□□□ 0.61
USP48-210ENST00000489108 C11orf84Q9BUA3 381 aaPredicted RBP18.85■□□□□ 0.61
USP48-210ENST00000489108 CD207Q9UJ71 328 aa18.85■□□□□ 0.61
USP48-210ENST00000489108 ZMYM6O95789 1325 aa18.84■□□□□ 0.61
USP48-210ENST00000489108 NEDD4P46934 1319 aa18.84■□□□□ 0.61
USP48-210ENST00000489108 TMEM221A6NGB7 291 aa18.84■□□□□ 0.61
USP48-210ENST00000489108 M0R296 226 aa18.84■□□□□ 0.61
USP48-210ENST00000489108 CAND2O75155 1236 aa18.84■□□□□ 0.61
USP48-210ENST00000489108 LGALS2P05162 132 aa18.84■□□□□ 0.61
USP48-210ENST00000489108 PTPN5P54829 565 aa18.84■□□□□ 0.61
USP48-210ENST00000489108 ADAM15Q13444 863 aa18.84■□□□□ 0.61
USP48-210ENST00000489108 ASPRV1Q53RT3 343 aa18.84■□□□□ 0.61
USP48-210ENST00000489108 TRIM67Q6ZTA4 783 aa18.84■□□□□ 0.61
USP48-210ENST00000489108 STOX1Q6ZVD7 989 aa18.84■□□□□ 0.61
USP48-210ENST00000489108 IL31RAQ8NI17 732 aa18.84■□□□□ 0.61
USP48-210ENST00000489108 APBB2Q92870 758 aa18.84■□□□□ 0.61
USP48-210ENST00000489108 KAT14Q9H8E8 782 aa18.84■□□□□ 0.61
USP48-210ENST00000489108 SETD4Q9NVD3 440 aa18.84■□□□□ 0.61
USP48-210ENST00000489108 PCDHB15Q9Y5E8 787 aa18.84■□□□□ 0.61
USP48-210ENST00000489108 USP34Q70CQ2 3546 aa18.83■□□□□ 0.6
USP48-210ENST00000489108 ST18O60284 1047 aa18.83■□□□□ 0.6
USP48-210ENST00000489108 TGFB3P10600 412 aa18.83■□□□□ 0.6
USP48-210ENST00000489108 HOXA13P31271 388 aaPredicted RBP18.83■□□□□ 0.6
USP48-210ENST00000489108 PGM5Q15124 567 aa18.83■□□□□ 0.6
USP48-210ENST00000489108 RNF41Q9H4P4 317 aaPredicted RBP18.83■□□□□ 0.6
USP48-210ENST00000489108 PARP1P09874 1014 aaKnown RBP18.82■□□□□ 0.6
USP48-210ENST00000489108 GHRHRQ02643 423 aa18.82■□□□□ 0.6
USP48-210ENST00000489108 TCF15Q12870 199 aa18.82■□□□□ 0.6
USP48-210ENST00000489108 NMIQ13287 307 aaPredicted RBP18.82■□□□□ 0.6
USP48-210ENST00000489108 FAM26DQ5JW98 314 aa18.82■□□□□ 0.6
USP48-210ENST00000489108 IQCA1Q86XH1 822 aa18.82■□□□□ 0.6
USP48-210ENST00000489108 CLP1Q92989 425 aaKnown RBP18.82■□□□□ 0.6
USP48-210ENST00000489108 AMNQ9BXJ7 453 aa18.82■□□□□ 0.6
USP48-210ENST00000489108 ALG13Q9NP73 1137 aaKnown RBP18.82■□□□□ 0.6
USP48-210ENST00000489108 RWDD3Q9Y3V2 267 aa18.82■□□□□ 0.6
USP48-210ENST00000489108 KDM4AO75164 1064 aa18.81■□□□□ 0.6
USP48-210ENST00000489108 CHRNA1P02708 482 aa18.81■□□□□ 0.6
USP48-210ENST00000489108 GNAT1P11488 350 aa18.81■□□□□ 0.6
USP48-210ENST00000489108 CAMK1Q14012 370 aa18.81■□□□□ 0.6
USP48-210ENST00000489108 CCDC178Q5BJE1 867 aa18.81■□□□□ 0.6
USP48-210ENST00000489108 MSLNLQ96KJ4 702 aa18.81■□□□□ 0.6
USP48-210ENST00000489108 MAP3K20Q9NYL2 800 aaKnown RBP18.81■□□□□ 0.6
USP48-210ENST00000489108 SUPT16HQ9Y5B9 1047 aaKnown RBP18.81■□□□□ 0.6
USP48-210ENST00000489108 CCDC171Q6TFL3 1326 aa18.8■□□□□ 0.6
USP48-210ENST00000489108 ADGRA3Q8IWK6 1321 aa18.8■□□□□ 0.6
USP48-210ENST00000489108 KAT6AQ92794 2004 aa18.8■□□□□ 0.6
USP48-210ENST00000489108 ENPP3O14638 875 aa18.8■□□□□ 0.6
USP48-210ENST00000489108 PPP1R11O60927 126 aaPredicted RBP18.8■□□□□ 0.6
USP48-210ENST00000489108 EYA4O95677 639 aa18.8■□□□□ 0.6
USP48-210ENST00000489108 MMP1P03956 469 aa18.8■□□□□ 0.6
USP48-210ENST00000489108 CCND2P30279 289 aa18.8■□□□□ 0.6
USP48-210ENST00000489108 NDUFV1P49821 464 aa18.8■□□□□ 0.6
USP48-210ENST00000489108 ZXDAP98168 799 aa18.8■□□□□ 0.6
USP48-210ENST00000489108 BTG3Q14201 252 aaPredicted RBP18.8■□□□□ 0.6
USP48-210ENST00000489108 STAG2Q8N3U4 1231 aa18.8■□□□□ 0.6
USP48-210ENST00000489108 ZSCAN10Q96SZ4 725 aaPredicted RBP18.8■□□□□ 0.6
USP48-210ENST00000489108 PRRX2Q99811 253 aa18.8■□□□□ 0.6
USP48-210ENST00000489108 USP26Q9BXU7 913 aa18.8■□□□□ 0.6
USP48-210ENST00000489108 RC3H2Q9HBD1 1191 aaKnown RBP18.8■□□□□ 0.6
USP48-210ENST00000489108 PLAGL2Q9UPG8 496 aa18.8■□□□□ 0.6
USP48-210ENST00000489108 TRIM6-TRIM34B2RNG4 842 aa18.79■□□□□ 0.6
USP48-210ENST00000489108 B4E1Z4 1266 aa18.79■□□□□ 0.6
USP48-210ENST00000489108 NOP56O00567 594 aaKnown RBP18.79■□□□□ 0.6
USP48-210ENST00000489108 ZNF213O14771 459 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms