RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 TREHO43280 583 aa13.29□□□□□ -0.28
USP11-210ENST00000489030 GGPS1O95749 300 aa13.29□□□□□ -0.28
USP11-210ENST00000489030 CTSHP09668 335 aa13.29□□□□□ -0.28
USP11-210ENST00000489030 UBA1P22314 1058 aaKnown RBP13.29□□□□□ -0.28
USP11-210ENST00000489030 PLEKHG4Q58EX7 1191 aa13.29□□□□□ -0.28
USP11-210ENST00000489030 ESR2Q92731 530 aa13.29□□□□□ -0.28
USP11-210ENST00000489030 MRPL38Q96DV4 380 aaKnown RBP13.29□□□□□ -0.28
USP11-210ENST00000489030 SPATA33Q96N06 139 aa13.29□□□□□ -0.28
USP11-210ENST00000489030 UIMC1Q96RL1 719 aa13.29□□□□□ -0.28
USP11-210ENST00000489030 ZSCAN10Q96SZ4 725 aaPredicted RBP13.29□□□□□ -0.28
USP11-210ENST00000489030 INSL6Q9Y581 213 aa13.29□□□□□ -0.28
USP11-210ENST00000489030 MYH7BA7E2Y1 1941 aa13.29□□□□□ -0.28
USP11-210ENST00000489030 RSPH10B2B2RC85 870 aa13.28□□□□□ -0.28
USP11-210ENST00000489030 DHX16O60231 1041 aaKnown RBP13.28□□□□□ -0.28
USP11-210ENST00000489030 UPP2O95045 317 aa13.28□□□□□ -0.28
USP11-210ENST00000489030 PARNO95453 639 aaKnown RBP13.28□□□□□ -0.28
USP11-210ENST00000489030 LINC00271P0C7V0 271 aa13.28□□□□□ -0.28
USP11-210ENST00000489030 RSPH10BP0C881 870 aa13.28□□□□□ -0.28
USP11-210ENST00000489030 SMIM10L2AP0DMW4 78 aa13.28□□□□□ -0.28
USP11-210ENST00000489030 SMIM10L2BP0DMW5 78 aa13.28□□□□□ -0.28
USP11-210ENST00000489030 HOXC8P31273 242 aa13.28□□□□□ -0.28
USP11-210ENST00000489030 HSPA4P34932 840 aa13.28□□□□□ -0.28
USP11-210ENST00000489030 CREB3L3Q68CJ9 461 aa13.28□□□□□ -0.28
USP11-210ENST00000489030 MCF2L2Q86YR7 1114 aa13.28□□□□□ -0.28
USP11-210ENST00000489030 KAT14Q9H8E8 782 aa13.28□□□□□ -0.28
USP11-210ENST00000489030 ZSWIM5Q9P217 1185 aa13.28□□□□□ -0.28
USP11-210ENST00000489030 MRPL11Q9Y3B7 192 aaKnown RBP13.28□□□□□ -0.28
USP11-210ENST00000489030 PRR33A8MZF0 331 aa13.27□□□□□ -0.29
USP11-210ENST00000489030 SLC27A2O14975 620 aa13.27□□□□□ -0.29
USP11-210ENST00000489030 AMHP03971 560 aa13.27□□□□□ -0.29
USP11-210ENST00000489030 PARP1P09874 1014 aaKnown RBP13.27□□□□□ -0.29
USP11-210ENST00000489030 GHRHRQ02643 423 aa13.27□□□□□ -0.29
USP11-210ENST00000489030 SEMA3FQ13275 785 aa13.27□□□□□ -0.29
USP11-210ENST00000489030 PGM5Q15124 567 aa13.27□□□□□ -0.29
USP11-210ENST00000489030 ASPRV1Q53RT3 343 aa13.27□□□□□ -0.29
USP11-210ENST00000489030 VSIG10LQ86VR7 867 aa13.27□□□□□ -0.29
USP11-210ENST00000489030 TRIM50Q86XT4 487 aa13.27□□□□□ -0.29
USP11-210ENST00000489030 MTMR8Q96EF0 704 aa13.27□□□□□ -0.29
USP11-210ENST00000489030 KATNAL1Q9BW62 490 aa13.27□□□□□ -0.29
USP11-210ENST00000489030 C22orf23Q9BZE7 217 aa13.27□□□□□ -0.29
USP11-210ENST00000489030 RNF41Q9H4P4 317 aaPredicted RBP13.27□□□□□ -0.29
USP11-210ENST00000489030 SENP2Q9HC62 589 aa13.27□□□□□ -0.29
USP11-210ENST00000489030 BAZ2BQ9UIF8 2168 aaKnown RBP13.27□□□□□ -0.29
USP11-210ENST00000489030 C17orf102A2RUQ5 167 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 H3BNC9 293 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 EFCAB14O75071 495 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 PPFIA4O75335 1185 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 CSPG5O95196 566 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 LGALS2P05162 132 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 CYP21A2P08686 494 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 PCP11498 1178 aaKnown RBP13.26□□□□□ -0.29
USP11-210ENST00000489030 GTF2F1P35269 517 aaKnown RBP eCLIP13.26□□□□□ -0.29
USP11-210ENST00000489030 LTBRP36941 435 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 ZP2Q05996 745 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 DLX2Q07687 328 aaPredicted RBP13.26□□□□□ -0.29
USP11-210ENST00000489030 GPM6BQ13491 265 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 KRT32Q14532 448 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 COL19A1Q14993 1142 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 CLUL1Q15846 466 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 ATG2AQ2TAZ0 1938 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 TSGA10IPQ3SY00 556 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 EP400NLQ6ZTU2 488 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 STOX1Q6ZVD7 989 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 CYB5R4Q7L1T6 521 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 TMEM192Q8IY95 271 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 BANK1Q8NDB2 785 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 KCNB2Q92953 911 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 ATP6V0A1Q93050 837 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 TOP1MTQ969P6 601 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 YME1L1Q96TA2 773 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 RNPEPQ9H4A4 650 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 SETD4Q9NVD3 440 aa13.26□□□□□ -0.29
USP11-210ENST00000489030 ZNF318Q5VUA4 2279 aa13.25□□□□□ -0.29
USP11-210ENST00000489030 POTEB3A0JP26 581 aa13.25□□□□□ -0.29
USP11-210ENST00000489030 GRM6O15303 877 aa13.25□□□□□ -0.29
USP11-210ENST00000489030 NT5C2P49902 561 aa13.25□□□□□ -0.29
USP11-210ENST00000489030 ANAPC15P60006 121 aa13.25□□□□□ -0.29
USP11-210ENST00000489030 TRDNQ13061 729 aa13.25□□□□□ -0.29
USP11-210ENST00000489030 SEC23AQ15436 765 aa13.25□□□□□ -0.29
USP11-210ENST00000489030 POTEBQ6S5H4 581 aa13.25□□□□□ -0.29
USP11-210ENST00000489030 FCHSD1Q86WN1 690 aa13.25□□□□□ -0.29
USP11-210ENST00000489030 FBXL18Q96ME1 805 aa13.25□□□□□ -0.29
USP11-210ENST00000489030 AMNQ9BXJ7 453 aa13.25□□□□□ -0.29
USP11-210ENST00000489030 CNNM2Q9H8M5 875 aa13.25□□□□□ -0.29
USP11-210ENST00000489030 MAD2L2Q9UI95 211 aa13.25□□□□□ -0.29
USP11-210ENST00000489030 MYH6P13533 1939 aa13.25□□□□□ -0.29
USP11-210ENST00000489030 EMSYQ7Z589 1322 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 C19orf67A6NJJ6 358 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 KLRF2D3W0D1 207 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 E7EWF7 191 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 H3BRB1 525 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 CYTH3O43739 400 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 RBM25P49756 843 aaKnown RBP13.24□□□□□ -0.29
USP11-210ENST00000489030 MRE11P49959 708 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 MRPS9P82933 396 aaKnown RBP13.24□□□□□ -0.29
USP11-210ENST00000489030 NHLH1Q02575 133 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 RUFY4Q6ZNE9 571 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 RPAINQ86UA6 219 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 IQCA1Q86XH1 822 aa13.24□□□□□ -0.29
USP11-210ENST00000489030 SEPT8Q92599 483 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms