RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 TMEM260Q9NX78 707 aa17.18■□□□□ 0.34
CYTH3-209ENST00000488964 PCDHA4Q9UN74 947 aa17.18■□□□□ 0.34
CYTH3-209ENST00000488964 LIMCH1Q9UPQ0 1083 aa17.18■□□□□ 0.34
CYTH3-209ENST00000488964 LTBP2Q14767 1821 aa17.17■□□□□ 0.34
CYTH3-209ENST00000488964 ST18O60284 1047 aa17.17■□□□□ 0.34
CYTH3-209ENST00000488964 B4GALT4O60513 344 aa17.17■□□□□ 0.34
CYTH3-209ENST00000488964 ZNF286BP0CG31 522 aa17.17■□□□□ 0.34
CYTH3-209ENST00000488964 HOXD8P13378 290 aaPredicted RBP17.17■□□□□ 0.34
CYTH3-209ENST00000488964 ITGB5P18084 799 aa17.17■□□□□ 0.34
CYTH3-209ENST00000488964 RBM25P49756 843 aaKnown RBP17.17■□□□□ 0.34
CYTH3-209ENST00000488964 SP2Q02086 613 aa17.17■□□□□ 0.34
CYTH3-209ENST00000488964 SP4Q02446 784 aa17.17■□□□□ 0.34
CYTH3-209ENST00000488964 SEMA3FQ13275 785 aa17.17■□□□□ 0.34
CYTH3-209ENST00000488964 BFSP2Q13515 415 aa17.17■□□□□ 0.34
CYTH3-209ENST00000488964 TRIM29Q14134 588 aa17.17■□□□□ 0.34
CYTH3-209ENST00000488964 RABEP1Q15276 862 aa17.17■□□□□ 0.34
CYTH3-209ENST00000488964 SESTD1Q86VW0 696 aa17.17■□□□□ 0.34
CYTH3-209ENST00000488964 TNPO1Q92973 898 aaKnown RBP17.17■□□□□ 0.34
CYTH3-209ENST00000488964 ALG1Q9BT22 464 aa17.17■□□□□ 0.34
CYTH3-209ENST00000488964 PRO3102Q9H379 93 aa17.17■□□□□ 0.34
CYTH3-209ENST00000488964 JPH1Q9HDC5 661 aaPredicted RBP17.17■□□□□ 0.34
CYTH3-209ENST00000488964 ORC3Q9UBD5 711 aaPredicted RBP17.17■□□□□ 0.34
CYTH3-209ENST00000488964 GRIN2DO15399 1336 aa17.17■□□□□ 0.34
CYTH3-209ENST00000488964 CYP3A4P08684 503 aa17.16■□□□□ 0.34
CYTH3-209ENST00000488964 GNAT1P11488 350 aa17.16■□□□□ 0.34
CYTH3-209ENST00000488964 KCNA2P16389 499 aa17.16■□□□□ 0.34
CYTH3-209ENST00000488964 KIAA0753Q2KHM9 967 aa17.16■□□□□ 0.34
CYTH3-209ENST00000488964 MFSD5Q6N075 450 aa17.16■□□□□ 0.34
CYTH3-209ENST00000488964 BLIDQ8IZY5 108 aa17.16■□□□□ 0.34
CYTH3-209ENST00000488964 RETREG2Q8NC44 543 aa17.16■□□□□ 0.34
CYTH3-209ENST00000488964 SEPT1Q8WYJ6 367 aa17.16■□□□□ 0.34
CYTH3-209ENST00000488964 GPR20Q99678 358 aa17.16■□□□□ 0.34
CYTH3-209ENST00000488964 PPP1R12CQ9BZL4 782 aa17.16■□□□□ 0.34
CYTH3-209ENST00000488964 TRPV6Q9H1D0 765 aa17.16■□□□□ 0.34
CYTH3-209ENST00000488964 MTIF3Q9H2K0 278 aaKnown RBP17.16■□□□□ 0.34
CYTH3-209ENST00000488964 SH2B1Q9NRF2 756 aaPredicted RBP17.16■□□□□ 0.34
CYTH3-209ENST00000488964 KCNH7Q9NS40 1196 aa17.16■□□□□ 0.34
CYTH3-209ENST00000488964 DNAH12Q6ZR08 3092 aa17.16■□□□□ 0.34
CYTH3-209ENST00000488964 NFASCO94856 1347 aa17.16■□□□□ 0.34
CYTH3-209ENST00000488964 H3BRB1 525 aa17.15■□□□□ 0.34
CYTH3-209ENST00000488964 LGALS2P05162 132 aa17.15■□□□□ 0.34
CYTH3-209ENST00000488964 PTGISQ16647 500 aa17.15■□□□□ 0.34
CYTH3-209ENST00000488964 ME3Q16798 604 aa17.15■□□□□ 0.34
CYTH3-209ENST00000488964 KRT25Q7Z3Z0 450 aa17.15■□□□□ 0.34
CYTH3-209ENST00000488964 PLA2G4DQ86XP0 818 aa17.15■□□□□ 0.34
CYTH3-209ENST00000488964 DAGLBQ8NCG7 672 aa17.15■□□□□ 0.34
CYTH3-209ENST00000488964 TUT1Q9H6E5 874 aaKnown RBP17.15■□□□□ 0.34
CYTH3-209ENST00000488964 AZI2Q9H6S1 392 aa17.15■□□□□ 0.34
CYTH3-209ENST00000488964 TRMT13Q9NUP7 481 aaKnown RBP17.15■□□□□ 0.34
CYTH3-209ENST00000488964 PKD2L1Q9P0L9 805 aa17.15■□□□□ 0.34
CYTH3-209ENST00000488964 SLC9A2Q9UBY0 812 aa17.15■□□□□ 0.34
CYTH3-209ENST00000488964 KAT6AQ92794 2004 aa17.14■□□□□ 0.34
CYTH3-209ENST00000488964 CCDC194A0A1B0GVG4 234 aa17.14■□□□□ 0.33
CYTH3-209ENST00000488964 MEIS1O00470 390 aa17.14■□□□□ 0.33
CYTH3-209ENST00000488964 PSRC1Q6PGN9 363 aaPredicted RBP17.14■□□□□ 0.33
CYTH3-209ENST00000488964 RPUSD2Q8IZ73 545 aaKnown RBP17.14■□□□□ 0.33
CYTH3-209ENST00000488964 NECAB1Q8N987 351 aa17.14■□□□□ 0.33
CYTH3-209ENST00000488964 CAGE1Q8TC20 777 aa17.14■□□□□ 0.33
CYTH3-209ENST00000488964 KAT2BQ92831 832 aa17.14■□□□□ 0.33
CYTH3-209ENST00000488964 GLG1Q92896 1179 aa17.14■□□□□ 0.33
CYTH3-209ENST00000488964 GTF2IRD1Q9UHL9 959 aa17.14■□□□□ 0.33
CYTH3-209ENST00000488964 HAS3O00219 553 aa17.13■□□□□ 0.33
CYTH3-209ENST00000488964 PITPNM1O00562 1244 aa17.13■□□□□ 0.33
CYTH3-209ENST00000488964 TCF7P36402 384 aaPredicted RBP17.13■□□□□ 0.33
CYTH3-209ENST00000488964 USP11P51784 963 aa17.13■□□□□ 0.33
CYTH3-209ENST00000488964 NONOQ15233 471 aaKnown RBP eCLIP17.13■□□□□ 0.33
CYTH3-209ENST00000488964 UTP14CQ5TAP6 766 aaKnown RBP17.13■□□□□ 0.33
CYTH3-209ENST00000488964 RASGRP4Q8TDF6 673 aa17.13■□□□□ 0.33
CYTH3-209ENST00000488964 NAP1L4Q99733 375 aaKnown RBP17.13■□□□□ 0.33
CYTH3-209ENST00000488964 NOC4LQ9BVI4 516 aaKnown RBP17.13■□□□□ 0.33
CYTH3-209ENST00000488964 SMARCAD1Q9H4L7 1026 aa17.13■□□□□ 0.33
CYTH3-209ENST00000488964 AGO4Q9HCK5 861 aaKnown RBP17.13■□□□□ 0.33
CYTH3-209ENST00000488964 TBC1D22BQ9NU19 505 aa17.13■□□□□ 0.33
CYTH3-209ENST00000488964 ERAP1Q9NZ08 941 aa17.13■□□□□ 0.33
CYTH3-209ENST00000488964 DOCK5Q9H7D0 1870 aa17.12■□□□□ 0.33
CYTH3-209ENST00000488964 C17orf102A2RUQ5 167 aa17.12■□□□□ 0.33
CYTH3-209ENST00000488964 ATP9AO75110 1047 aa17.12■□□□□ 0.33
CYTH3-209ENST00000488964 PARNO95453 639 aaKnown RBP17.12■□□□□ 0.33
CYTH3-209ENST00000488964 PFKMP08237 780 aa17.12■□□□□ 0.33
CYTH3-209ENST00000488964 CIITAP33076 1130 aa17.12■□□□□ 0.33
CYTH3-209ENST00000488964 RFC2P35250 354 aa17.12■□□□□ 0.33
CYTH3-209ENST00000488964 MCM2P49736 904 aa17.12■□□□□ 0.33
CYTH3-209ENST00000488964 PRR16Q569H4 304 aa17.12■□□□□ 0.33
CYTH3-209ENST00000488964 LLPHQ9BRT6 129 aaKnown RBP17.12■□□□□ 0.33
CYTH3-209ENST00000488964 ZNF577Q9BSK1 485 aa17.12■□□□□ 0.33
CYTH3-209ENST00000488964 C16orf70Q9BSU1 422 aa17.12■□□□□ 0.33
CYTH3-209ENST00000488964 HDAC6Q9UBN7 1215 aa17.12■□□□□ 0.33
CYTH3-209ENST00000488964 IPO5O00410 1097 aaKnown RBP17.11■□□□□ 0.33
CYTH3-209ENST00000488964 CYP2C9P11712 490 aa17.11■□□□□ 0.33
CYTH3-209ENST00000488964 CYP2C18P33260 490 aa17.11■□□□□ 0.33
CYTH3-209ENST00000488964 HMGN5P82970 282 aaKnown RBP17.11■□□□□ 0.33
CYTH3-209ENST00000488964 PTK7Q13308 1070 aa17.11■□□□□ 0.33
CYTH3-209ENST00000488964 SAFBQ15424 915 aaKnown RBP eCLIP17.11■□□□□ 0.33
CYTH3-209ENST00000488964 LRIT3Q3SXY7 679 aa17.11■□□□□ 0.33
CYTH3-209ENST00000488964 FAM160B1Q5W0V3 765 aa17.11■□□□□ 0.33
CYTH3-209ENST00000488964 GDF6Q6KF10 455 aaPredicted RBP17.11■□□□□ 0.33
CYTH3-209ENST00000488964 NSUN7Q8NE18 718 aaKnown RBP17.11■□□□□ 0.33
CYTH3-209ENST00000488964 CYP2W1Q8TAV3 490 aa17.11■□□□□ 0.33
CYTH3-209ENST00000488964 TBCKQ8TEA7 893 aa17.11■□□□□ 0.33
CYTH3-209ENST00000488964 RNPC3Q96LT9 517 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms