RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 PTK7Q13308 1070 aa15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 CYFIP1Q7L576 1253 aa15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 DEFB128Q7Z7B8 93 aa15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 CDX2Q99626 313 aaPredicted RBP15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 C16orf70Q9BSU1 422 aa15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 PBX4Q9BYU1 374 aa15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 RIC8AQ9NPQ8 531 aa15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 CXXC1Q9P0U4 656 aaPredicted RBP15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 MSRAQ9UJ68 235 aa15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 ZNF215Q9UL58 517 aaPredicted RBP15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 PCDHA6Q9UN73 950 aa15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 PCDHA8Q9Y5H6 950 aa15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 GTF3C3Q9Y5Q9 886 aa15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 SLC4A7Q9Y6M7 1214 aa15.83■□□□□ 0.12
SPTLC1-207ENST00000488921 H3BRB1 525 aa15.82■□□□□ 0.12
SPTLC1-207ENST00000488921 MAFGO15525 162 aa15.82■□□□□ 0.12
SPTLC1-207ENST00000488921 FOSP01100 380 aaPredicted RBP15.82■□□□□ 0.12
SPTLC1-207ENST00000488921 SELPP16109 830 aa15.82■□□□□ 0.12
SPTLC1-207ENST00000488921 ADCY7P51828 1080 aa15.82■□□□□ 0.12
SPTLC1-207ENST00000488921 APOBRQ0VD83 1088 aa15.82■□□□□ 0.12
SPTLC1-207ENST00000488921 MTMR1Q13613 665 aa15.82■□□□□ 0.12
SPTLC1-207ENST00000488921 BRF1Q92994 677 aa15.82■□□□□ 0.12
SPTLC1-207ENST00000488921 TUT1Q9H6E5 874 aaKnown RBP15.82■□□□□ 0.12
SPTLC1-207ENST00000488921 BARHL2Q9NY43 387 aa15.82■□□□□ 0.12
SPTLC1-207ENST00000488921 V9GY48 417 aaPredicted RBP15.82■□□□□ 0.12
SPTLC1-207ENST00000488921 STXBP3O00186 592 aa15.81■□□□□ 0.12
SPTLC1-207ENST00000488921 BAIAP3O94812 1187 aa15.81■□□□□ 0.12
SPTLC1-207ENST00000488921 CPA1P15085 419 aa15.81■□□□□ 0.12
SPTLC1-207ENST00000488921 CDC27P30260 824 aa15.81■□□□□ 0.12
SPTLC1-207ENST00000488921 AP3B2Q13367 1082 aa15.81■□□□□ 0.12
SPTLC1-207ENST00000488921 LRRC8DQ7L1W4 858 aa15.81■□□□□ 0.12
SPTLC1-207ENST00000488921 SLC17A8Q8NDX2 589 aa15.81■□□□□ 0.12
SPTLC1-207ENST00000488921 CCDC12Q8WUD4 166 aaPredicted RBP15.81■□□□□ 0.12
SPTLC1-207ENST00000488921 CTAGE1Q96RT6 745 aa15.81■□□□□ 0.12
SPTLC1-207ENST00000488921 SLC9A7Q96T83 725 aa15.81■□□□□ 0.12
SPTLC1-207ENST00000488921 GPR20Q99678 358 aa15.81■□□□□ 0.12
SPTLC1-207ENST00000488921 AGXT2Q9BYV1 514 aa15.81■□□□□ 0.12
SPTLC1-207ENST00000488921 FTOQ9C0B1 505 aaKnown RBP eCLIP15.81■□□□□ 0.12
SPTLC1-207ENST00000488921 ZNF576Q9H609 170 aa15.81■□□□□ 0.12
SPTLC1-207ENST00000488921 FAM217BQ9NTX9 383 aaPredicted RBP15.81■□□□□ 0.12
SPTLC1-207ENST00000488921 TET1Q8NFU7 2136 aa15.8■□□□□ 0.12
SPTLC1-207ENST00000488921 PTPRSQ13332 1948 aa15.8■□□□□ 0.12
SPTLC1-207ENST00000488921 C17orf102A2RUQ5 167 aa15.8■□□□□ 0.12
SPTLC1-207ENST00000488921 SMCO2A6NFE2 343 aa15.8■□□□□ 0.12
SPTLC1-207ENST00000488921 GRXCR1A8MXD5 290 aa15.8■□□□□ 0.12
SPTLC1-207ENST00000488921 GNAT1P11488 350 aa15.8■□□□□ 0.12
SPTLC1-207ENST00000488921 CKBP12277 381 aa15.8■□□□□ 0.12
SPTLC1-207ENST00000488921 FOSL2P15408 326 aa15.8■□□□□ 0.12
SPTLC1-207ENST00000488921 PFKFB3Q16875 520 aaPredicted RBP15.8■□□□□ 0.12
SPTLC1-207ENST00000488921 DHX38Q92620 1227 aaKnown RBP15.8■□□□□ 0.12
SPTLC1-207ENST00000488921 VWCEQ96DN2 955 aa15.8■□□□□ 0.12
SPTLC1-207ENST00000488921 JADE2Q9NQC1 790 aa15.8■□□□□ 0.12
SPTLC1-207ENST00000488921 UBIAD1Q9Y5Z9 338 aa15.8■□□□□ 0.12
SPTLC1-207ENST00000488921 SMIM10L2AP0DMW4 78 aa15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 SMIM10L2BP0DMW5 78 aa15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 SCG2P13521 617 aa15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 KCNA2P16389 499 aa15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 ATP2A2P16615 1042 aaKnown RBP15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 ITGB5P18084 799 aa15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 HOXC8P31273 242 aa15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 ADD1P35611 737 aaKnown RBP15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 PBX2P40425 430 aa15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 AKAP17AQ02040 695 aaKnown RBP15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 SP4Q02446 784 aa15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 MCTP2Q6DN12 878 aa15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 TYW1BQ6NUM6 668 aa15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 RUFY3Q7L099 469 aa15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 MYLIPQ8WY64 445 aa15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 ATP6V0A1Q93050 837 aa15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 ANO3Q9BYT9 981 aa15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 BCAS3Q9H6U6 928 aa15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 PCDHA11Q9Y5I1 949 aa15.79■□□□□ 0.12
SPTLC1-207ENST00000488921 EMSYQ7Z589 1322 aa15.78■□□□□ 0.12
SPTLC1-207ENST00000488921 ESYT2A0FGR8 921 aa15.78■□□□□ 0.12
SPTLC1-207ENST00000488921 TCF7P36402 384 aaPredicted RBP15.78■□□□□ 0.12
SPTLC1-207ENST00000488921 KCNJ6P48051 423 aa15.78■□□□□ 0.12
SPTLC1-207ENST00000488921 CNKSR3Q6P9H4 555 aa15.78■□□□□ 0.12
SPTLC1-207ENST00000488921 SERINC5Q86VE9 423 aa15.78■□□□□ 0.12
SPTLC1-207ENST00000488921 PHOSPHO2Q8TCD6 241 aa15.78■□□□□ 0.12
SPTLC1-207ENST00000488921 MXRA8Q9BRK3 442 aa15.78■□□□□ 0.12
SPTLC1-207ENST00000488921 SLC28A3Q9HAS3 691 aa15.78■□□□□ 0.12
SPTLC1-207ENST00000488921 CYP46A1Q9Y6A2 500 aa15.78■□□□□ 0.12
SPTLC1-207ENST00000488921 MICAL3Q7RTP6 2002 aa15.78■□□□□ 0.12
SPTLC1-207ENST00000488921 PRPF3O43395 683 aaKnown RBP15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 EFCAB14O75071 495 aa15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 CAND2O75155 1236 aa15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 CXCL10P02778 98 aa15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 SREBF1P36956 1147 aa15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 CLK2P49760 499 aaKnown RBP15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 GRIN2CQ14957 1233 aa15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 TRIM71Q2Q1W2 868 aaKnown RBP15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 UTP14CQ5TAP6 766 aaKnown RBP15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 TRIM50Q86XT4 487 aa15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 CCDC148Q8NFR7 591 aa15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 MAFAQ8NHW3 353 aaPredicted RBP15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 SEPT1Q8WYJ6 367 aa15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 GAS2L1Q99501 681 aaPredicted RBP15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 RNF26Q9BY78 433 aaPredicted RBP15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 TM6SF1Q9BZW5 370 aa15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 NKX2-4Q9H2Z4 354 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms