RNA–Protein interactions for RNA: ENST00000488625.6

ZEB1-206, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,026 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-206ENST00000488625 NCAPHQ15003 741 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 PAF1Q8N7H5 531 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 GJA10Q969M2 543 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 IFT74Q96LB3 600 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 AP1M1Q9BXS5 423 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 PNMA6FA0A0J9YX94 578 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 MYCLP12524 364 aaPredicted RBP10.75□□□□□ -0.69
ZEB1-206ENST00000488625 H2AFXP16104 143 aaPredicted RBP10.75□□□□□ -0.69
ZEB1-206ENST00000488625 CCDC6Q16204 474 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 ANKRD40Q6AI12 368 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 CEP128Q6ZU80 1094 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 FAM114A2Q9NRY5 505 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 GCNT4Q9P109 453 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 MYO3BQ8WXR4 1341 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 PGRMC1O00264 195 aaKnown RBP10.75□□□□□ -0.69
ZEB1-206ENST00000488625 DKC1O60832 514 aaKnown RBP eCLIP10.75□□□□□ -0.69
ZEB1-206ENST00000488625 GCFC2P16383 781 aaKnown RBP10.75□□□□□ -0.69
ZEB1-206ENST00000488625 TOB1P50616 345 aaPredicted RBP10.75□□□□□ -0.69
ZEB1-206ENST00000488625 KCNB1Q14721 858 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 ZNF365Q70YC5 407 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 MIER3Q7Z3K6 550 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 CELF1Q92879 486 aaKnown RBP10.75□□□□□ -0.69
ZEB1-206ENST00000488625 MMS19Q96T76 1030 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 CD44P16070 742 aaKnown RBP10.75□□□□□ -0.69
ZEB1-206ENST00000488625 C6orf163Q5TEZ5 329 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 TBC1D9BQ66K14 1250 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 ZNF34Q8IZ26 560 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.75□□□□□ -0.69
ZEB1-206ENST00000488625 USTQ9Y2C2 406 aa10.75□□□□□ -0.69
ZEB1-206ENST00000488625 PSMC2P35998 433 aaKnown RBP10.74□□□□□ -0.69
ZEB1-206ENST00000488625 PLA2G4AP47712 749 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 WHAMMQ8TF30 809 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 HOMER2Q9NSB8 354 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 A0A087WUV0 522 aaPredicted RBP10.74□□□□□ -0.69
ZEB1-206ENST00000488625 GFPT2O94808 682 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 COASYQ13057 564 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 GPATCH4Q5T3I0 446 aaKnown RBP10.74□□□□□ -0.69
ZEB1-206ENST00000488625 EMBQ6PCB8 327 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 ANKRD42Q8N9B4 389 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 CNTNAP5Q8WYK1 1306 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 POLR2MP0CAP2 368 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 IRX5P78411 483 aaPredicted RBP10.74□□□□□ -0.69
ZEB1-206ENST00000488625 ICA1Q05084 483 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 GLE1Q53GS7 698 aaKnown RBP10.74□□□□□ -0.69
ZEB1-206ENST00000488625 FBXL16Q8N461 479 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 FAM84BQ96KN1 310 aaPredicted RBP10.74□□□□□ -0.69
ZEB1-206ENST00000488625 AGTPBP1Q9UPW5 1226 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 PLAAQ9Y263 795 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 NRXN3Q9Y4C0 1643 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 HGSO14964 777 aaPredicted RBP10.74□□□□□ -0.69
ZEB1-206ENST00000488625 NR1D1P20393 614 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 IFT88Q13099 833 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 GRAPQ13588 217 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 FAM102BQ5T8I3 360 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 SLC44A5Q8NCS7 719 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 PPP1R14CQ8TAE6 165 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 GRAPLQ8TC17 118 aaPredicted RBP10.74□□□□□ -0.69
ZEB1-206ENST00000488625 FBF1Q8TES7 1133 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 NAA25Q14CX7 972 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 PPP2R5EQ16537 467 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 FAM178BQ8IXR5 827 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 ADSSL1Q8N142 457 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 SPC25Q9HBM1 224 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 PTPN22Q9Y2R2 807 aa10.74□□□□□ -0.69
ZEB1-206ENST00000488625 SLIT3O75094 1523 aa10.73□□□□□ -0.69
ZEB1-206ENST00000488625 N4BP1O75113 896 aaKnown RBP10.73□□□□□ -0.69
ZEB1-206ENST00000488625 KLK7P49862 253 aa10.73□□□□□ -0.69
ZEB1-206ENST00000488625 UHMK1Q8TAS1 419 aaKnown RBP10.73□□□□□ -0.69
ZEB1-206ENST00000488625 TEKT3Q9BXF9 490 aa10.73□□□□□ -0.69
ZEB1-206ENST00000488625 GAP43P17677 238 aa10.73□□□□□ -0.69
ZEB1-206ENST00000488625 COL9A3Q14050 684 aaPredicted RBP10.73□□□□□ -0.69
ZEB1-206ENST00000488625 UAP1Q16222 522 aaPredicted RBP10.73□□□□□ -0.69
ZEB1-206ENST00000488625 DPH6Q7L8W6 267 aa10.73□□□□□ -0.69
ZEB1-206ENST00000488625 NSUN4Q96CB9 384 aaKnown RBP10.73□□□□□ -0.69
ZEB1-206ENST00000488625 MAGEA9P43362 315 aa10.73□□□□□ -0.69
ZEB1-206ENST00000488625 MXRA7P84157 204 aa10.73□□□□□ -0.69
ZEB1-206ENST00000488625 GKAP1Q5VSY0 366 aaPredicted RBP10.73□□□□□ -0.69
ZEB1-206ENST00000488625 NEBLO76041 1014 aa10.73□□□□□ -0.69
ZEB1-206ENST00000488625 ATP2A2P16615 1042 aaKnown RBP10.73□□□□□ -0.69
ZEB1-206ENST00000488625 NT5C2P49902 561 aa10.73□□□□□ -0.69
ZEB1-206ENST00000488625 STRN3Q13033 797 aa10.73□□□□□ -0.69
ZEB1-206ENST00000488625 FAM186BQ8IYM0 893 aa10.73□□□□□ -0.69
ZEB1-206ENST00000488625 MAIP1Q8WWC4 291 aa10.73□□□□□ -0.69
ZEB1-206ENST00000488625 SRGNP10124 158 aa10.72□□□□□ -0.69
ZEB1-206ENST00000488625 GBP1P32455 592 aa10.72□□□□□ -0.69
ZEB1-206ENST00000488625 PDE6CP51160 858 aa10.72□□□□□ -0.69
ZEB1-206ENST00000488625 ANKRD65E5RJM6 399 aa10.72□□□□□ -0.69
ZEB1-206ENST00000488625 BACH1O14867 736 aa10.72□□□□□ -0.69
ZEB1-206ENST00000488625 HARSP12081 509 aaKnown RBP10.72□□□□□ -0.69
ZEB1-206ENST00000488625 SNAP25P60880 206 aa10.72□□□□□ -0.69
ZEB1-206ENST00000488625 ZBTB16Q05516 673 aa10.72□□□□□ -0.69
ZEB1-206ENST00000488625 SNCBQ16143 134 aa10.72□□□□□ -0.69
ZEB1-206ENST00000488625 FYB2Q5VWT5 728 aa10.72□□□□□ -0.69
ZEB1-206ENST00000488625 PPP4R3CPQ6ZMV5 832 aa10.72□□□□□ -0.69
ZEB1-206ENST00000488625 PROM2Q8N271 834 aa10.72□□□□□ -0.69
ZEB1-206ENST00000488625 KCND1Q9NSA2 647 aa10.72□□□□□ -0.69
ZEB1-206ENST00000488625 PRPF6O94906 941 aaKnown RBP10.72□□□□□ -0.69
ZEB1-206ENST00000488625 TBC1D8O95759 1140 aa10.72□□□□□ -0.69
ZEB1-206ENST00000488625 CLNS1AP54105 237 aaKnown RBP10.72□□□□□ -0.69
ZEB1-206ENST00000488625 ERVK-24P63145 666 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms