RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 MRVI1Q9Y6F6 885 aa13.24□□□□□ -0.29
SNU13-208ENST00000488571 MICAL3Q7RTP6 2002 aa13.23□□□□□ -0.29
SNU13-208ENST00000488571 PPP1R11O60927 126 aaPredicted RBP13.23□□□□□ -0.29
SNU13-208ENST00000488571 CFBP00751 764 aa13.23□□□□□ -0.29
SNU13-208ENST00000488571 PARP1P09874 1014 aaKnown RBP13.23□□□□□ -0.29
SNU13-208ENST00000488571 SP2Q02086 613 aa13.23□□□□□ -0.29
SNU13-208ENST00000488571 MYSM1Q5VVJ2 828 aa13.23□□□□□ -0.29
SNU13-208ENST00000488571 CWC27Q6UX04 472 aaKnown RBP13.23□□□□□ -0.29
SNU13-208ENST00000488571 PLEKHM2Q8IWE5 1019 aa13.23□□□□□ -0.29
SNU13-208ENST00000488571 DHX37Q8IY37 1157 aaKnown RBP13.23□□□□□ -0.29
SNU13-208ENST00000488571 TGS1Q96RS0 853 aaKnown RBP13.23□□□□□ -0.29
SNU13-208ENST00000488571 PDCD2LQ9BRP1 358 aa13.23□□□□□ -0.29
SNU13-208ENST00000488571 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.22□□□□□ -0.29
SNU13-208ENST00000488571 DHX16O60231 1041 aaKnown RBP13.22□□□□□ -0.29
SNU13-208ENST00000488571 SORBS3O60504 671 aa13.22□□□□□ -0.29
SNU13-208ENST00000488571 EFCAB14O75071 495 aa13.22□□□□□ -0.29
SNU13-208ENST00000488571 IKBKEQ14164 716 aa13.22□□□□□ -0.29
SNU13-208ENST00000488571 HSDL1Q3SXM5 330 aa13.22□□□□□ -0.29
SNU13-208ENST00000488571 FAM117BQ6P1L5 589 aa13.22□□□□□ -0.29
SNU13-208ENST00000488571 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
SNU13-208ENST00000488571 STOX1Q6ZVD7 989 aa13.22□□□□□ -0.29
SNU13-208ENST00000488571 SMC5Q8IY18 1101 aa13.22□□□□□ -0.29
SNU13-208ENST00000488571 IL31RAQ8NI17 732 aa13.22□□□□□ -0.29
SNU13-208ENST00000488571 MTMR8Q96EF0 704 aa13.22□□□□□ -0.29
SNU13-208ENST00000488571 C16orf70Q9BSU1 422 aa13.22□□□□□ -0.29
SNU13-208ENST00000488571 AMNQ9BXJ7 453 aa13.22□□□□□ -0.29
SNU13-208ENST00000488571 OSBPL3Q9H4L5 887 aa13.22□□□□□ -0.29
SNU13-208ENST00000488571 PPFIA4O75335 1185 aa13.21□□□□□ -0.29
SNU13-208ENST00000488571 LGR5O75473 907 aa13.21□□□□□ -0.29
SNU13-208ENST00000488571 MYCLP12524 364 aaPredicted RBP13.21□□□□□ -0.29
SNU13-208ENST00000488571 PGM5Q15124 567 aa13.21□□□□□ -0.29
SNU13-208ENST00000488571 SLC35G1Q2M3R5 365 aa13.21□□□□□ -0.29
SNU13-208ENST00000488571 TMEM31Q5JXX7 168 aa13.21□□□□□ -0.29
SNU13-208ENST00000488571 CELF3Q5SZQ8 465 aaKnown RBP13.21□□□□□ -0.29
SNU13-208ENST00000488571 SERINC5Q86VE9 423 aa13.21□□□□□ -0.29
SNU13-208ENST00000488571 VSIG10LQ86VR7 867 aa13.21□□□□□ -0.29
SNU13-208ENST00000488571 DBF4BQ8NFT6 615 aa13.21□□□□□ -0.29
SNU13-208ENST00000488571 SPATA33Q96N06 139 aa13.21□□□□□ -0.29
SNU13-208ENST00000488571 C17orf80Q9BSJ5 609 aa13.21□□□□□ -0.29
SNU13-208ENST00000488571 DSCC1Q9BVC3 393 aa13.21□□□□□ -0.29
SNU13-208ENST00000488571 UBE2ZQ9H832 354 aaPredicted RBP13.21□□□□□ -0.29
SNU13-208ENST00000488571 MAD2L2Q9UI95 211 aa13.21□□□□□ -0.29
SNU13-208ENST00000488571 ARIH1Q9Y4X5 557 aaPredicted RBP13.21□□□□□ -0.29
SNU13-208ENST00000488571 ZBTB5O15062 677 aa13.2□□□□□ -0.3
SNU13-208ENST00000488571 GPR37L1O60883 481 aa13.2□□□□□ -0.3
SNU13-208ENST00000488571 GGPS1O95749 300 aa13.2□□□□□ -0.3
SNU13-208ENST00000488571 UBA1P22314 1058 aaKnown RBP13.2□□□□□ -0.3
SNU13-208ENST00000488571 HOXA13P31271 388 aaPredicted RBP13.2□□□□□ -0.3
SNU13-208ENST00000488571 HOXC8P31273 242 aa13.2□□□□□ -0.3
SNU13-208ENST00000488571 HTRA4P83105 476 aaPredicted RBP13.2□□□□□ -0.3
SNU13-208ENST00000488571 SEC23AQ15436 765 aa13.2□□□□□ -0.3
SNU13-208ENST00000488571 PLEKHG4Q58EX7 1191 aa13.2□□□□□ -0.3
SNU13-208ENST00000488571 B4GALNT3Q6L9W6 998 aa13.2□□□□□ -0.3
SNU13-208ENST00000488571 GPKOWQ92917 476 aaPredicted RBP eCLIP13.2□□□□□ -0.3
SNU13-208ENST00000488571 KRTAP3-3Q9BYR6 98 aa13.2□□□□□ -0.3
SNU13-208ENST00000488571 KRTAP3-2Q9BYR7 98 aa13.2□□□□□ -0.3
SNU13-208ENST00000488571 OSBPL7Q9BZF2 842 aa13.2□□□□□ -0.3
SNU13-208ENST00000488571 KRT23Q9C075 422 aa13.2□□□□□ -0.3
SNU13-208ENST00000488571 IL25Q9H293 177 aa13.2□□□□□ -0.3
SNU13-208ENST00000488571 BCAS3Q9H6U6 928 aa13.2□□□□□ -0.3
SNU13-208ENST00000488571 DIAPH3Q9NSV4 1193 aa13.2□□□□□ -0.3
SNU13-208ENST00000488571 MAP3K20Q9NYL2 800 aaKnown RBP13.2□□□□□ -0.3
SNU13-208ENST00000488571 INSL6Q9Y581 213 aa13.2□□□□□ -0.3
SNU13-208ENST00000488571 EMSYQ7Z589 1322 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 DOCK5Q9H7D0 1870 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 PALM3A6NDB9 673 aaPredicted RBP13.19□□□□□ -0.3
SNU13-208ENST00000488571 FAM86C2PA6NEL3 165 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 RSPH10B2B2RC85 870 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 KLRF2D3W0D1 207 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 PI4K2BG5E9Z4 385 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 PPP1R37O75864 691 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 RSPH10BP0C881 870 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 THPOP40225 353 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 IMMTQ16891 758 aaKnown RBP13.19□□□□□ -0.3
SNU13-208ENST00000488571 LEXMQ3ZCV2 418 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 IFIT1BQ5T764 474 aaKnown RBP13.19□□□□□ -0.3
SNU13-208ENST00000488571 KCNV1Q6PIU1 500 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 CYB5R4Q7L1T6 521 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 CHD1LQ86WJ1 897 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 FAM178BQ8IXR5 827 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.19□□□□□ -0.3
SNU13-208ENST00000488571 UBAC1Q9BSL1 405 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 PCDHA1Q9Y5I3 950 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 NLRC5Q86WI3 1866 aa13.19□□□□□ -0.3
SNU13-208ENST00000488571 COL4A6Q14031 1691 aa13.18□□□□□ -0.3
SNU13-208ENST00000488571 TGFB3P10600 412 aa13.18□□□□□ -0.3
SNU13-208ENST00000488571 KCNA5P22460 613 aa13.18□□□□□ -0.3
SNU13-208ENST00000488571 NUCB1Q02818 461 aa13.18□□□□□ -0.3
SNU13-208ENST00000488571 MYOCDQ8IZQ8 938 aa13.18□□□□□ -0.3
SNU13-208ENST00000488571 CNNM2Q9H8M5 875 aa13.18□□□□□ -0.3
SNU13-208ENST00000488571 HCN4Q9Y3Q4 1203 aa13.18□□□□□ -0.3
SNU13-208ENST00000488571 ATG2AQ2TAZ0 1938 aa13.17□□□□□ -0.3
SNU13-208ENST00000488571 BAZ2BQ9UIF8 2168 aaKnown RBP13.17□□□□□ -0.3
SNU13-208ENST00000488571 C17orf102A2RUQ5 167 aa13.17□□□□□ -0.3
SNU13-208ENST00000488571 H3BRB1 525 aa13.17□□□□□ -0.3
SNU13-208ENST00000488571 TREHO43280 583 aa13.17□□□□□ -0.3
SNU13-208ENST00000488571 IGHDP01880 384 aa13.17□□□□□ -0.3
SNU13-208ENST00000488571 AMHP03971 560 aa13.17□□□□□ -0.3
SNU13-208ENST00000488571 LGALS2P05162 132 aa13.17□□□□□ -0.3
SNU13-208ENST00000488571 SMIM10L2AP0DMW4 78 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms