RNA–Protein interactions for RNA: ENST00000488206.5

TM2D1-208, Transcript of TM2 domain containing 1, humanhuman

TSL 5

Gene TM2D1, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-208ENST00000488206 ARHGAP1Q07960 439 aa17.71■□□□□ 0.43
TM2D1-208ENST00000488206 ITGB3BPQ13352 177 aaPredicted RBP17.71■□□□□ 0.43
TM2D1-208ENST00000488206 LAMC2Q13753 1193 aa17.71■□□□□ 0.43
TM2D1-208ENST00000488206 CELF3Q5SZQ8 465 aaKnown RBP17.71■□□□□ 0.43
TM2D1-208ENST00000488206 LRCH2Q5VUJ6 765 aa17.71■□□□□ 0.43
TM2D1-208ENST00000488206 ATL3Q6DD88 541 aa17.71■□□□□ 0.43
TM2D1-208ENST00000488206 FAM173BQ6P4H8 233 aa17.71■□□□□ 0.43
TM2D1-208ENST00000488206 DHX37Q8IY37 1157 aaKnown RBP17.71■□□□□ 0.43
TM2D1-208ENST00000488206 COPS5Q92905 334 aa17.71■□□□□ 0.43
TM2D1-208ENST00000488206 TEKT3Q9BXF9 490 aa17.71■□□□□ 0.43
TM2D1-208ENST00000488206 AP5M1Q9H0R1 490 aa17.71■□□□□ 0.43
TM2D1-208ENST00000488206 UPF3AQ9H1J1 476 aaKnown RBP17.71■□□□□ 0.43
TM2D1-208ENST00000488206 MLXIPQ9HAP2 919 aa17.71■□□□□ 0.43
TM2D1-208ENST00000488206 XPNPEP3Q9NQH7 507 aa17.71■□□□□ 0.43
TM2D1-208ENST00000488206 SYNRGQ9UMZ2 1314 aa17.71■□□□□ 0.42
TM2D1-208ENST00000488206 ATP9AO75110 1047 aa17.7■□□□□ 0.42
TM2D1-208ENST00000488206 GJA9P57773 515 aa17.7■□□□□ 0.42
TM2D1-208ENST00000488206 ATP2C1P98194 919 aaPredicted RBP17.7■□□□□ 0.42
TM2D1-208ENST00000488206 TMEM63BQ5T3F8 832 aa17.7■□□□□ 0.42
TM2D1-208ENST00000488206 GJC2Q5T442 439 aaPredicted RBP17.7■□□□□ 0.42
TM2D1-208ENST00000488206 ANO1Q5XXA6 986 aa17.7■□□□□ 0.42
TM2D1-208ENST00000488206 CYFIP1Q7L576 1253 aa17.7■□□□□ 0.42
TM2D1-208ENST00000488206 DEFB118Q96PH6 123 aa17.7■□□□□ 0.42
TM2D1-208ENST00000488206 MTMR9Q96QG7 549 aa17.7■□□□□ 0.42
TM2D1-208ENST00000488206 TMEM60Q9H2L4 133 aa17.7■□□□□ 0.42
TM2D1-208ENST00000488206 POLR3EQ9NVU0 708 aa17.7■□□□□ 0.42
TM2D1-208ENST00000488206 NOP56O00567 594 aaKnown RBP17.69■□□□□ 0.42
TM2D1-208ENST00000488206 CPT1AP50416 773 aa17.69■□□□□ 0.42
TM2D1-208ENST00000488206 KRT76Q01546 638 aa17.69■□□□□ 0.42
TM2D1-208ENST00000488206 PTGDRQ13258 359 aa17.69■□□□□ 0.42
TM2D1-208ENST00000488206 SF3A1Q15459 793 aaKnown RBP17.69■□□□□ 0.42
TM2D1-208ENST00000488206 BRDTQ58F21 947 aaPredicted RBP17.69■□□□□ 0.42
TM2D1-208ENST00000488206 COL13A1Q5TAT6 717 aaPredicted RBP17.69■□□□□ 0.42
TM2D1-208ENST00000488206 LHX8Q68G74 356 aa17.69■□□□□ 0.42
TM2D1-208ENST00000488206 PPTC7Q8NI37 304 aa17.69■□□□□ 0.42
TM2D1-208ENST00000488206 HAS1Q92839 578 aa17.69■□□□□ 0.42
TM2D1-208ENST00000488206 SPATA33Q96N06 139 aa17.69■□□□□ 0.42
TM2D1-208ENST00000488206 USP28Q96RU2 1077 aa17.69■□□□□ 0.42
TM2D1-208ENST00000488206 SLC9A2Q9UBY0 812 aa17.69■□□□□ 0.42
TM2D1-208ENST00000488206 DDX39AO00148 427 aaKnown RBP17.68■□□□□ 0.42
TM2D1-208ENST00000488206 DHX15O43143 795 aaKnown RBP17.68■□□□□ 0.42
TM2D1-208ENST00000488206 DYNC1LI2O43237 492 aaPredicted RBP17.68■□□□□ 0.42
TM2D1-208ENST00000488206 SORBS3O60504 671 aa17.68■□□□□ 0.42
TM2D1-208ENST00000488206 ADAMTS4O75173 837 aa17.68■□□□□ 0.42
TM2D1-208ENST00000488206 PSMD10O75832 226 aa17.68■□□□□ 0.42
TM2D1-208ENST00000488206 GJB1P08034 283 aa17.68■□□□□ 0.42
TM2D1-208ENST00000488206 PRPHP41219 470 aa17.68■□□□□ 0.42
TM2D1-208ENST00000488206 NASPP49321 788 aaPredicted RBP17.68■□□□□ 0.42
TM2D1-208ENST00000488206 NKX3-2P78367 333 aa17.68■□□□□ 0.42
TM2D1-208ENST00000488206 FSCN1Q16658 493 aaKnown RBP17.68■□□□□ 0.42
TM2D1-208ENST00000488206 TMEM266Q2M3C6 531 aa17.68■□□□□ 0.42
TM2D1-208ENST00000488206 FOXD4L6Q3SYB3 417 aaPredicted RBP17.68■□□□□ 0.42
TM2D1-208ENST00000488206 ZNF746Q6NUN9 644 aaPredicted RBP17.68■□□□□ 0.42
TM2D1-208ENST00000488206 FOXD4L3Q6VB84 417 aaPredicted RBP17.68■□□□□ 0.42
TM2D1-208ENST00000488206 C4orf32Q8N8J7 132 aa17.68■□□□□ 0.42
TM2D1-208ENST00000488206 UIMC1Q96RL1 719 aa17.68■□□□□ 0.42
TM2D1-208ENST00000488206 TMEM106CQ9BVX2 250 aa17.68■□□□□ 0.42
TM2D1-208ENST00000488206 FTOQ9C0B1 505 aaKnown RBP eCLIP17.68■□□□□ 0.42
TM2D1-208ENST00000488206 CLIC4Q9Y696 253 aa17.68■□□□□ 0.42
TM2D1-208ENST00000488206 MORC2Q9Y6X9 1032 aaPredicted RBP17.68■□□□□ 0.42
TM2D1-208ENST00000488206 ELP1O95163 1332 aa17.68■□□□□ 0.42
TM2D1-208ENST00000488206 DOCK5Q9H7D0 1870 aa17.67■□□□□ 0.42
TM2D1-208ENST00000488206 C6orf222P0C671 652 aaPredicted RBP17.67■□□□□ 0.42
TM2D1-208ENST00000488206 CAPN2P17655 700 aa17.67■□□□□ 0.42
TM2D1-208ENST00000488206 PTGS1P23219 599 aa17.67■□□□□ 0.42
TM2D1-208ENST00000488206 CST5P28325 142 aaPredicted RBP17.67■□□□□ 0.42
TM2D1-208ENST00000488206 KRT85P78386 507 aa17.67■□□□□ 0.42
TM2D1-208ENST00000488206 SP4Q02446 784 aa17.67■□□□□ 0.42
TM2D1-208ENST00000488206 DNM1Q05193 864 aaKnown RBP17.67■□□□□ 0.42
TM2D1-208ENST00000488206 PPP2R5CQ13362 524 aa17.67■□□□□ 0.42
TM2D1-208ENST00000488206 ARL6IP4Q66PJ3 421 aaKnown RBP17.67■□□□□ 0.42
TM2D1-208ENST00000488206 RNF180Q86T96 592 aa17.67■□□□□ 0.42
TM2D1-208ENST00000488206 SMAP1Q8IYB5 467 aaPredicted RBP17.67■□□□□ 0.42
TM2D1-208ENST00000488206 U2AF1L4Q8WU68 220 aaKnown RBP17.67■□□□□ 0.42
TM2D1-208ENST00000488206 AFG1LQ8WV93 481 aa17.67■□□□□ 0.42
TM2D1-208ENST00000488206 GJA10Q969M2 543 aa17.67■□□□□ 0.42
TM2D1-208ENST00000488206 VAV3Q9UKW4 847 aa17.67■□□□□ 0.42
TM2D1-208ENST00000488206 CFAP45Q9UL16 551 aa17.67■□□□□ 0.42
TM2D1-208ENST00000488206 A6NJR5 290 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 WDR64B1ANS9 1081 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 ZEB2O60315 1214 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 YEATS4O95619 227 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 PGK1P00558 417 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 MMP3P08254 477 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 SFNP31947 248 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 TXKP42681 527 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 JAK3P52333 1124 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 ACTR2P61160 394 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 CEBPZQ03701 1054 aaKnown RBP17.66■□□□□ 0.42
TM2D1-208ENST00000488206 STK38Q15208 465 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 PTPAQ15257 358 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 ARRDC4Q8NCT1 418 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 RDM1Q8NG50 284 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 GPR20Q99678 358 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 RAB34Q9BZG1 259 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 CRISPLD2Q9H0B8 497 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 UNC45AQ9H3U1 944 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 TTC12Q9H892 705 aaPredicted RBP17.66■□□□□ 0.42
TM2D1-208ENST00000488206 OGDHLQ9ULD0 1010 aa17.66■□□□□ 0.42
TM2D1-208ENST00000488206 PCDHA12Q9UN75 941 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms