RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 KAT2BQ92831 832 aa19.49■□□□□ 0.71
SHROOM1-205ENST00000488072 GSTTP1A0A1W2PQM5 241 aa19.48■□□□□ 0.71
SHROOM1-205ENST00000488072 TGFB3P10600 412 aa19.48■□□□□ 0.71
SHROOM1-205ENST00000488072 USP11P51784 963 aa19.48■□□□□ 0.71
SHROOM1-205ENST00000488072 UTP14CQ5TAP6 766 aaKnown RBP19.48■□□□□ 0.71
SHROOM1-205ENST00000488072 LARP1BQ659C4 914 aaKnown RBP19.48■□□□□ 0.71
SHROOM1-205ENST00000488072 MCTP2Q6DN12 878 aa19.48■□□□□ 0.71
SHROOM1-205ENST00000488072 MCTP1Q6DN14 999 aa19.48■□□□□ 0.71
SHROOM1-205ENST00000488072 SLC39A5Q6ZMH5 540 aa19.48■□□□□ 0.71
SHROOM1-205ENST00000488072 NEK8Q86SG6 692 aa19.48■□□□□ 0.71
SHROOM1-205ENST00000488072 VTI1AQ96AJ9 217 aa19.48■□□□□ 0.71
SHROOM1-205ENST00000488072 MBOAT7Q96N66 472 aa19.48■□□□□ 0.71
SHROOM1-205ENST00000488072 GPR20Q99678 358 aa19.48■□□□□ 0.71
SHROOM1-205ENST00000488072 BRMS1Q9HCU9 246 aa19.48■□□□□ 0.71
SHROOM1-205ENST00000488072 CYP3A7-CYP3A51PA0A087WV96 503 aa19.47■□□□□ 0.71
SHROOM1-205ENST00000488072 CCNT1O60563 726 aaKnown RBP19.47■□□□□ 0.71
SHROOM1-205ENST00000488072 CYP3A7P24462 503 aa19.47■□□□□ 0.71
SHROOM1-205ENST00000488072 NEDD9Q14511 834 aa19.47■□□□□ 0.71
SHROOM1-205ENST00000488072 SAFBQ15424 915 aaKnown RBP eCLIP19.47■□□□□ 0.71
SHROOM1-205ENST00000488072 TRIM60Q495X7 471 aa19.47■□□□□ 0.71
SHROOM1-205ENST00000488072 KCNV1Q6PIU1 500 aa19.47■□□□□ 0.71
SHROOM1-205ENST00000488072 METTL7BQ6UX53 244 aa19.47■□□□□ 0.71
SHROOM1-205ENST00000488072 POTEDQ86YR6 584 aa19.47■□□□□ 0.71
SHROOM1-205ENST00000488072 PPTC7Q8NI37 304 aa19.47■□□□□ 0.71
SHROOM1-205ENST00000488072 EMID1Q96A84 441 aaPredicted RBP19.47■□□□□ 0.71
SHROOM1-205ENST00000488072 ZNF577Q9BSK1 485 aa19.47■□□□□ 0.71
SHROOM1-205ENST00000488072 TSEN34Q9BSV6 310 aaKnown RBP19.47■□□□□ 0.71
SHROOM1-205ENST00000488072 STARD7Q9NQZ5 370 aa19.47■□□□□ 0.71
SHROOM1-205ENST00000488072 DDX25Q9UHL0 483 aaKnown RBP19.47■□□□□ 0.71
SHROOM1-205ENST00000488072 MKI67P46013 3256 aaKnown RBP19.47■□□□□ 0.71
SHROOM1-205ENST00000488072 CPT1AP50416 773 aa19.46■□□□□ 0.71
SHROOM1-205ENST00000488072 TOB1P50616 345 aaPredicted RBP19.46■□□□□ 0.71
SHROOM1-205ENST00000488072 RTP1P59025 263 aa19.46■□□□□ 0.71
SHROOM1-205ENST00000488072 HIC1Q14526 733 aa19.46■□□□□ 0.71
SHROOM1-205ENST00000488072 NIPA1Q7RTP0 329 aa19.46■□□□□ 0.71
SHROOM1-205ENST00000488072 FERMT3Q86UX7 667 aa19.46■□□□□ 0.71
SHROOM1-205ENST00000488072 PCSK9Q8NBP7 692 aaKnown RBP19.46■□□□□ 0.71
SHROOM1-205ENST00000488072 PCYT2Q99447 389 aa19.46■□□□□ 0.71
SHROOM1-205ENST00000488072 SENP7Q9BQF6 1050 aa19.46■□□□□ 0.71
SHROOM1-205ENST00000488072 ATP11BQ9Y2G3 1177 aa19.46■□□□□ 0.71
SHROOM1-205ENST00000488072 VPS37CA5D8V6 355 aaPredicted RBP19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 MOXD2PA6NHM9 499 aa19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 H3BQV1 296 aa19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 IPO5O00410 1097 aaKnown RBP19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 SYT1P21579 422 aa19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 ZNF174Q15697 407 aa19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 Q4G0T1 1027 aa19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 FOXD4L5Q5VV16 416 aaPredicted RBP19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 NOSTRINQ8IVI9 506 aa19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 C7orf61Q8IZ16 206 aa19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 ETNPPLQ8TBG4 499 aa19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 FOXD4L4Q8WXT5 416 aaPredicted RBP19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 HAS1Q92839 578 aa19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 INTS4Q96HW7 963 aaKnown RBP19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 CDHR1Q96JP9 859 aa19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 C16orf70Q9BSU1 422 aa19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 TMEM60Q9H2L4 133 aa19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 FOXP1Q9H334 677 aaPredicted RBP19.45■□□□□ 0.7
SHROOM1-205ENST00000488072 CHMP2AO43633 222 aa19.44■□□□□ 0.7
SHROOM1-205ENST00000488072 LGALS2P05162 132 aa19.44■□□□□ 0.7
SHROOM1-205ENST00000488072 HOXD8P13378 290 aaPredicted RBP19.44■□□□□ 0.7
SHROOM1-205ENST00000488072 U2AF2P26368 475 aaKnown RBP eCLIP19.44■□□□□ 0.7
SHROOM1-205ENST00000488072 ACTR2P61160 394 aa19.44■□□□□ 0.7
SHROOM1-205ENST00000488072 MLLT1Q03111 559 aaPredicted RBP19.44■□□□□ 0.7
SHROOM1-205ENST00000488072 TLE2Q04725 743 aa19.44■□□□□ 0.7
SHROOM1-205ENST00000488072 NBPF20Q3BBV1 942 aa19.44■□□□□ 0.7
SHROOM1-205ENST00000488072 FAM173BQ6P4H8 233 aa19.44■□□□□ 0.7
SHROOM1-205ENST00000488072 SH3RF1Q7Z6J0 888 aa19.44■□□□□ 0.7
SHROOM1-205ENST00000488072 DPF3Q92784 378 aa19.44■□□□□ 0.7
SHROOM1-205ENST00000488072 SLC5A5Q92911 643 aa19.44■□□□□ 0.7
SHROOM1-205ENST00000488072 GLT1D1Q96MS3 346 aa19.44■□□□□ 0.7
SHROOM1-205ENST00000488072 MTG1Q9BT17 334 aaPredicted RBP19.44■□□□□ 0.7
SHROOM1-205ENST00000488072 JPH1Q9HDC5 661 aaPredicted RBP19.44■□□□□ 0.7
SHROOM1-205ENST00000488072 SLC9A2Q9UBY0 812 aa19.44■□□□□ 0.7
SHROOM1-205ENST00000488072 ALPK3Q96L96 1907 aa19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 NOP56O00567 594 aaKnown RBP19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 MAFGO15525 162 aa19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 ZEB2O60315 1214 aa19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 PQBP1O60828 265 aaKnown RBP19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 MCM7P33993 719 aa19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 TCF7P36402 384 aaPredicted RBP19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 PSEN2P49810 448 aa19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 ZNF200P98182 395 aaPredicted RBP19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 ITGA7Q13683 1181 aa19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 GNL2Q13823 731 aaKnown RBP19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 PKP1Q13835 747 aa19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 DGKDQ16760 1214 aa19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 SDF4Q9BRK5 362 aa19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 TRPV6Q9H1D0 765 aa19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 UNC45AQ9H3U1 944 aa19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 POLR3EQ9NVU0 708 aa19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 MTMR6Q9Y217 621 aa19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 NFASCO94856 1347 aa19.43■□□□□ 0.7
SHROOM1-205ENST00000488072 PSMD10O75832 226 aa19.42■□□□□ 0.7
SHROOM1-205ENST00000488072 SYN1P17600 705 aa19.42■□□□□ 0.7
SHROOM1-205ENST00000488072 MARK3P27448 753 aa19.42■□□□□ 0.7
SHROOM1-205ENST00000488072 CDK7P50613 346 aa19.42■□□□□ 0.7
SHROOM1-205ENST00000488072 SETQ01105 290 aaPredicted RBP19.42■□□□□ 0.7
SHROOM1-205ENST00000488072 SNX17Q15036 470 aa19.42■□□□□ 0.7
SHROOM1-205ENST00000488072 PPP4R3AQ6IN85 833 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms