RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 LCHNA4D1U4 455 aa14.07□□□□□ -0.16
VPS16-208ENST00000487461 NEDD9Q14511 834 aa14.07□□□□□ -0.16
VPS16-208ENST00000487461 CREB3L3Q68CJ9 461 aa14.07□□□□□ -0.16
VPS16-208ENST00000487461 METTL7BQ6UX53 244 aa14.07□□□□□ -0.16
VPS16-208ENST00000487461 NFXL1Q6ZNB6 911 aa14.07□□□□□ -0.16
VPS16-208ENST00000487461 SERINC5Q86VE9 423 aa14.07□□□□□ -0.16
VPS16-208ENST00000487461 SMARCC2Q8TAQ2 1214 aa14.07□□□□□ -0.16
VPS16-208ENST00000487461 CUL5Q93034 780 aa14.07□□□□□ -0.16
VPS16-208ENST00000487461 TMEM87BQ96K49 555 aa14.07□□□□□ -0.16
VPS16-208ENST00000487461 GPR20Q99678 358 aa14.07□□□□□ -0.16
VPS16-208ENST00000487461 RNPEPQ9H4A4 650 aa14.07□□□□□ -0.16
VPS16-208ENST00000487461 PRRC2BQ5JSZ5 2229 aaKnown RBP14.07□□□□□ -0.16
VPS16-208ENST00000487461 TANC1Q9C0D5 1861 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 CCDC69A6NI79 296 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 RSPH10B2B2RC85 870 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 PIK3CDO00329 1044 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 NOP56O00567 594 aaKnown RBP14.06□□□□□ -0.16
VPS16-208ENST00000487461 TREHO43280 583 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 FIBPO43427 364 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 RSPH10BP0C881 870 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 SMIM10L2AP0DMW4 78 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 SMIM10L2BP0DMW5 78 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 HOXC8P31273 242 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 THPOP40225 353 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 LIFRP42702 1097 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 GNAQP50148 359 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 IKBKEQ14164 716 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 PCNX4Q63HM2 1172 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 SKAP1Q86WV1 359 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 RAB11FIP4Q86YS3 637 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 ATP6V0A1Q93050 837 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 ZBED2Q9BTP6 218 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 USP26Q9BXU7 913 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 LRRC2Q9BYS8 371 aa14.06□□□□□ -0.16
VPS16-208ENST00000487461 SEC63Q9UGP8 760 aaKnown RBP14.06□□□□□ -0.16
VPS16-208ENST00000487461 hCG_1642624A0A1W2PR95 340 aa14.05□□□□□ -0.16
VPS16-208ENST00000487461 TNFRSF10AO00220 468 aa14.05□□□□□ -0.16
VPS16-208ENST00000487461 GTPBP6O43824 516 aaPredicted RBP14.05□□□□□ -0.16
VPS16-208ENST00000487461 LPXNO60711 386 aa14.05□□□□□ -0.16
VPS16-208ENST00000487461 LGR5O75473 907 aa14.05□□□□□ -0.16
VPS16-208ENST00000487461 GJB5O95377 273 aa14.05□□□□□ -0.16
VPS16-208ENST00000487461 GRB10Q13322 594 aa14.05□□□□□ -0.16
VPS16-208ENST00000487461 UTP14CQ5TAP6 766 aaKnown RBP14.05□□□□□ -0.16
VPS16-208ENST00000487461 XRRA1Q6P2D8 792 aa14.05□□□□□ -0.16
VPS16-208ENST00000487461 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.05□□□□□ -0.16
VPS16-208ENST00000487461 DBF4BQ8NFT6 615 aa14.05□□□□□ -0.16
VPS16-208ENST00000487461 RAD9AQ99638 391 aa14.05□□□□□ -0.16
VPS16-208ENST00000487461 SENP7Q9BQF6 1050 aa14.05□□□□□ -0.16
VPS16-208ENST00000487461 OSBPL7Q9BZF2 842 aa14.05□□□□□ -0.16
VPS16-208ENST00000487461 TSPYL2Q9H2G4 693 aaPredicted RBP14.05□□□□□ -0.16
VPS16-208ENST00000487461 PSTPIP2Q9H939 334 aa14.05□□□□□ -0.16
VPS16-208ENST00000487461 SETD4Q9NVD3 440 aa14.05□□□□□ -0.16
VPS16-208ENST00000487461 EFCAB14O75071 495 aa14.04□□□□□ -0.16
VPS16-208ENST00000487461 ATP9AO75110 1047 aa14.04□□□□□ -0.16
VPS16-208ENST00000487461 CALM1P0DP23 149 aa14.04□□□□□ -0.16
VPS16-208ENST00000487461 CALM2P0DP24 149 aa14.04□□□□□ -0.16
VPS16-208ENST00000487461 CALM3P0DP25 149 aa14.04□□□□□ -0.16
VPS16-208ENST00000487461 SP4Q02446 784 aa14.04□□□□□ -0.16
VPS16-208ENST00000487461 TFF2Q03403 129 aa14.04□□□□□ -0.16
VPS16-208ENST00000487461 MKRN4PQ13434 485 aaPredicted RBP14.04□□□□□ -0.16
VPS16-208ENST00000487461 SKIV2LQ15477 1246 aaKnown RBP14.04□□□□□ -0.16
VPS16-208ENST00000487461 FAM117BQ6P1L5 589 aa14.04□□□□□ -0.16
VPS16-208ENST00000487461 NLRX1Q86UT6 975 aa14.04□□□□□ -0.16
VPS16-208ENST00000487461 TRIM50Q86XT4 487 aa14.04□□□□□ -0.16
VPS16-208ENST00000487461 CCDC82Q8N4S0 544 aa14.04□□□□□ -0.16
VPS16-208ENST00000487461 FANCBQ8NB91 859 aa14.04□□□□□ -0.16
VPS16-208ENST00000487461 ADAMTS19Q8TE59 1207 aa14.04□□□□□ -0.16
VPS16-208ENST00000487461 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
VPS16-208ENST00000487461 SLC12A7Q9Y666 1083 aa14.04□□□□□ -0.16
VPS16-208ENST00000487461 BMP1P13497 986 aa14.03□□□□□ -0.16
VPS16-208ENST00000487461 ITGB5P18084 799 aa14.03□□□□□ -0.16
VPS16-208ENST00000487461 ADAM17P78536 824 aa14.03□□□□□ -0.16
VPS16-208ENST00000487461 UBE2SQ16763 222 aa14.03□□□□□ -0.16
VPS16-208ENST00000487461 PLEKHG4Q58EX7 1191 aa14.03□□□□□ -0.16
VPS16-208ENST00000487461 EMSYQ7Z589 1322 aa14.03□□□□□ -0.16
VPS16-208ENST00000487461 PTPRSQ13332 1948 aa14.03□□□□□ -0.16
VPS16-208ENST00000487461 LINC01553A4QN01 128 aa14.02□□□□□ -0.17
VPS16-208ENST00000487461 GNAT1P11488 350 aa14.02□□□□□ -0.17
VPS16-208ENST00000487461 KCNA2P16389 499 aa14.02□□□□□ -0.17
VPS16-208ENST00000487461 ERVK-21P61565 698 aa14.02□□□□□ -0.17
VPS16-208ENST00000487461 TMTC3Q6ZXV5 915 aa14.02□□□□□ -0.17
VPS16-208ENST00000487461 SGMS1Q86VZ5 419 aa14.02□□□□□ -0.17
VPS16-208ENST00000487461 GIMAP8Q8ND71 665 aaPredicted RBP14.02□□□□□ -0.17
VPS16-208ENST00000487461 GPRASP2Q96D09 838 aa14.02□□□□□ -0.17
VPS16-208ENST00000487461 TGS1Q96RS0 853 aaKnown RBP14.02□□□□□ -0.17
VPS16-208ENST00000487461 UHRF1Q96T88 793 aaPredicted RBP14.02□□□□□ -0.17
VPS16-208ENST00000487461 SUGCTQ9HAC7 445 aa14.02□□□□□ -0.17
VPS16-208ENST00000487461 PCDHA6Q9UN73 950 aa14.02□□□□□ -0.17
VPS16-208ENST00000487461 PCDHA8Q9Y5H6 950 aa14.02□□□□□ -0.17
VPS16-208ENST00000487461 UBIAD1Q9Y5Z9 338 aa14.02□□□□□ -0.17
VPS16-208ENST00000487461 GSTTP1A0A1W2PQM5 241 aa14.01□□□□□ -0.17
VPS16-208ENST00000487461 AMHP03971 560 aa14.01□□□□□ -0.17
VPS16-208ENST00000487461 CTSHP09668 335 aa14.01□□□□□ -0.17
VPS16-208ENST00000487461 TCF7P36402 384 aaPredicted RBP14.01□□□□□ -0.17
VPS16-208ENST00000487461 KCNQ1P51787 676 aa14.01□□□□□ -0.17
VPS16-208ENST00000487461 ARHGAP4P98171 946 aa14.01□□□□□ -0.17
VPS16-208ENST00000487461 EXOSC10Q01780 885 aaKnown RBP14.01□□□□□ -0.17
VPS16-208ENST00000487461 BMP2KLQ5H9B9 411 aa14.01□□□□□ -0.17
VPS16-208ENST00000487461 FAM26DQ5JW98 314 aa14.01□□□□□ -0.17
VPS16-208ENST00000487461 MICU3Q86XE3 530 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms