RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 GBP3Q9H0R5 595 aa7.87□□□□□ -1.15
RTFDC1-209ENST00000487211 SUSD2Q9UGT4 822 aa7.87□□□□□ -1.15
RTFDC1-209ENST00000487211 GTF2IRD1Q9UHL9 959 aa7.87□□□□□ -1.15
RTFDC1-209ENST00000487211 ZNF451Q9Y4E5 1061 aa7.87□□□□□ -1.15
RTFDC1-209ENST00000487211 PCDHB12Q9Y5F1 795 aa7.87□□□□□ -1.15
RTFDC1-209ENST00000487211 USP42Q9H9J4 1324 aaKnown RBP7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 TCERG1O14776 1098 aaKnown RBP7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 CAMTA2O94983 1202 aa7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 HOXB7P09629 217 aa7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 CD247P20963 164 aa7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 CYP27A1Q02318 531 aa7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 DOC2BQ14184 412 aa7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 HLFQ16534 295 aa7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 TWISTNBQ3B726 338 aaPredicted RBP7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 NBPF9Q3BBW0 867 aa7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 ANKRD39Q53RE8 183 aa7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 COPS6Q7L5N1 327 aa7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 ZNF669Q96BR6 464 aaPredicted RBP7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 COX4I2Q96KJ9 171 aa7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 HEXIM2Q96MH2 286 aaKnown RBP7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 MYH16Q9H6N6 1097 aa7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 NMRK2Q9NPI5 230 aa7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 DDX21Q9NR30 783 aaKnown RBP eCLIP7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 CHPF2Q9P2E5 772 aa7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 LRP2BPQ9P2M1 347 aa7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 SUGT1Q9Y2Z0 365 aa7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 KDM3BQ7LBC6 1761 aa7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 COL5A3P25940 1745 aaPredicted RBP7.86□□□□□ -1.15
RTFDC1-209ENST00000487211 COL15A1P39059 1388 aa7.85□□□□□ -1.15
RTFDC1-209ENST00000487211 UBR3Q6ZT12 1888 aa7.85□□□□□ -1.15
RTFDC1-209ENST00000487211 A0A087WZG4 1122 aa7.85□□□□□ -1.15
RTFDC1-209ENST00000487211 IQCA1LA6NCM1 817 aa7.85□□□□□ -1.15
RTFDC1-209ENST00000487211 AGRPO00253 132 aa7.85□□□□□ -1.15
RTFDC1-209ENST00000487211 SHOXO15266 292 aa7.85□□□□□ -1.15
RTFDC1-209ENST00000487211 F13BP05160 661 aa7.85□□□□□ -1.15
RTFDC1-209ENST00000487211 NFIAQ12857 509 aa7.85□□□□□ -1.15
RTFDC1-209ENST00000487211 AIMP1Q12904 312 aaKnown RBP7.85□□□□□ -1.15
RTFDC1-209ENST00000487211 KANSL2Q9H9L4 492 aa7.85□□□□□ -1.15
RTFDC1-209ENST00000487211 GP6Q9HCN6 339 aa7.85□□□□□ -1.15
RTFDC1-209ENST00000487211 KCNH3Q9ULD8 1083 aa7.85□□□□□ -1.15
RTFDC1-209ENST00000487211 TUBGCP6Q96RT7 1819 aa7.85□□□□□ -1.15
RTFDC1-209ENST00000487211 PRR33A8MZF0 331 aa7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 PPM1BO75688 479 aa7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 MMP10P09238 476 aa7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 ITGA4P13612 1032 aa7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 DDR1Q08345 913 aa7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 SNW1Q13573 536 aaKnown RBP7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 NFIXQ14938 502 aa7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 NOL9Q5SY16 702 aaKnown RBP7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 CCDC30Q5VVM6 783 aa7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 TBC1D9BQ66K14 1250 aa7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 G2E3Q7L622 706 aa7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 LRRC47Q8N1G4 583 aaKnown RBP7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 ADCY4Q8NFM4 1077 aa7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 THAP3Q8WTV1 239 aaPredicted RBP7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 Q96M66 194 aa7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 DBNDD2Q9BQY9 259 aa7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 SPATA9Q9BWV2 254 aa7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 PRDM14Q9GZV8 571 aa7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 CWC22Q9HCG8 908 aaKnown RBP7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 WHRNQ9P202 907 aa7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 DBF4Q9UBU7 674 aaPredicted RBP7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 APEX2Q9UBZ4 518 aa7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 CICQ96RK0 1608 aaPredicted RBP7.84□□□□□ -1.15
RTFDC1-209ENST00000487211 WDR64B1ANS9 1081 aa7.83□□□□□ -1.16
RTFDC1-209ENST00000487211 ERVV-1B6SEH8 477 aa7.83□□□□□ -1.16
RTFDC1-209ENST00000487211 POLRMTO00411 1230 aaKnown RBP7.83□□□□□ -1.16
RTFDC1-209ENST00000487211 IGF2BP3O00425 579 aaKnown RBP eCLIP7.83□□□□□ -1.16
RTFDC1-209ENST00000487211 POLD1P28340 1107 aa7.83□□□□□ -1.16
RTFDC1-209ENST00000487211 KIR3DL1P43629 444 aa7.83□□□□□ -1.16
RTFDC1-209ENST00000487211 CLEC4GQ6UXB4 293 aa7.83□□□□□ -1.16
RTFDC1-209ENST00000487211 ARHGAP27Q6ZUM4 889 aa7.83□□□□□ -1.16
RTFDC1-209ENST00000487211 DTWD2Q8NBA8 298 aa7.83□□□□□ -1.16
RTFDC1-209ENST00000487211 LRRN4CLQ8ND94 238 aa7.83□□□□□ -1.16
RTFDC1-209ENST00000487211 SHKBP1Q8TBC3 707 aa7.83□□□□□ -1.16
RTFDC1-209ENST00000487211 BRF1Q92994 677 aa7.83□□□□□ -1.16
RTFDC1-209ENST00000487211 OSBPL1AQ9BXW6 950 aa7.83□□□□□ -1.16
RTFDC1-209ENST00000487211 HYPKQ9NX55 129 aa7.83□□□□□ -1.16
RTFDC1-209ENST00000487211 GFOD1Q9NXC2 390 aa7.83□□□□□ -1.16
RTFDC1-209ENST00000487211 MAP3K15Q6ZN16 1313 aa7.82□□□□□ -1.16
RTFDC1-209ENST00000487211 IGLV1-40P01703 118 aa7.82□□□□□ -1.16
RTFDC1-209ENST00000487211 SERPINB2P05120 415 aa7.82□□□□□ -1.16
RTFDC1-209ENST00000487211 FSTP19883 344 aa7.82□□□□□ -1.16
RTFDC1-209ENST00000487211 LBX1P52954 281 aa7.82□□□□□ -1.16
RTFDC1-209ENST00000487211 ZNF445P59923 1031 aa7.82□□□□□ -1.16
RTFDC1-209ENST00000487211 C2orf27AQ580R0 203 aa7.82□□□□□ -1.16
RTFDC1-209ENST00000487211 TMC3Q7Z5M5 1100 aa7.82□□□□□ -1.16
RTFDC1-209ENST00000487211 SGSM3Q96HU1 749 aa7.82□□□□□ -1.16
RTFDC1-209ENST00000487211 METTL22Q9BUU2 404 aaPredicted RBP7.82□□□□□ -1.16
RTFDC1-209ENST00000487211 LGR4Q9BXB1 951 aa7.82□□□□□ -1.16
RTFDC1-209ENST00000487211 ASCC2Q9H1I8 757 aaPredicted RBP7.82□□□□□ -1.16
RTFDC1-209ENST00000487211 AKT3Q9Y243 479 aa7.82□□□□□ -1.16
RTFDC1-209ENST00000487211 LEMD3Q9Y2U8 911 aa7.82□□□□□ -1.16
RTFDC1-209ENST00000487211 QSER1Q2KHR3 1735 aa7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 A0A1W2PQU0 124 aa7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 ESYT3A0FGR9 886 aa7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 FAM155AB1AL88 458 aaPredicted RBP7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 NOP56O00567 594 aaKnown RBP7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 GSC2O15499 205 aa7.81□□□□□ -1.16
RTFDC1-209ENST00000487211 H2AFB1P0C5Y9 115 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms