RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 TCRBV5S4A2TA0A5A2 114 aa7.97□□□□□ -1.13
LTN1-206ENST00000486427 WNT9AO14904 365 aa7.97□□□□□ -1.13
LTN1-206ENST00000486427 RASGRP1O95267 797 aa7.97□□□□□ -1.13
LTN1-206ENST00000486427 LRG1P02750 347 aa7.97□□□□□ -1.13
LTN1-206ENST00000486427 CAP1Q01518 475 aa7.97□□□□□ -1.13
LTN1-206ENST00000486427 GRIN1Q05586 938 aa7.97□□□□□ -1.13
LTN1-206ENST00000486427 SMAD4Q13485 552 aaKnown RBP7.97□□□□□ -1.13
LTN1-206ENST00000486427 TRIM61Q5EBN2 209 aa7.97□□□□□ -1.13
LTN1-206ENST00000486427 LINC00482Q8N8I6 264 aa7.97□□□□□ -1.13
LTN1-206ENST00000486427 LINC01356Q8N9X3 169 aa7.97□□□□□ -1.13
LTN1-206ENST00000486427 SH3RF2Q8TEC5 729 aa7.97□□□□□ -1.13
LTN1-206ENST00000486427 ZNF526Q8TF50 670 aaPredicted RBP7.97□□□□□ -1.13
LTN1-206ENST00000486427 ZBTB8AQ96BR9 441 aa7.97□□□□□ -1.13
LTN1-206ENST00000486427 SCLYQ96I15 445 aa7.97□□□□□ -1.13
LTN1-206ENST00000486427 YIPF4Q9BSR8 244 aa7.97□□□□□ -1.13
LTN1-206ENST00000486427 NCOA5Q9HCD5 579 aaKnown RBP7.97□□□□□ -1.13
LTN1-206ENST00000486427 SPATA6Q9NWH7 488 aaPredicted RBP7.97□□□□□ -1.13
LTN1-206ENST00000486427 CCDC163A0A0D9SF12 145 aa7.96□□□□□ -1.14
LTN1-206ENST00000486427 MAFKO60675 156 aa7.96□□□□□ -1.14
LTN1-206ENST00000486427 SRGAP2CP0DJJ0 459 aa7.96□□□□□ -1.14
LTN1-206ENST00000486427 BMP7P18075 431 aa7.96□□□□□ -1.14
LTN1-206ENST00000486427 ITGA1P56199 1179 aa7.96□□□□□ -1.14
LTN1-206ENST00000486427 TUSC3Q13454 348 aa7.96□□□□□ -1.14
LTN1-206ENST00000486427 TEPPQ6URK8 271 aa7.96□□□□□ -1.14
LTN1-206ENST00000486427 ZC3H18Q86VM9 953 aaKnown RBP7.96□□□□□ -1.14
LTN1-206ENST00000486427 TOE1Q96GM8 510 aaKnown RBP7.96□□□□□ -1.14
LTN1-206ENST00000486427 C11orf84Q9BUA3 381 aaPredicted RBP7.96□□□□□ -1.14
LTN1-206ENST00000486427 MRPL4Q9BYD3 311 aaKnown RBP7.96□□□□□ -1.14
LTN1-206ENST00000486427 CD244Q9BZW8 370 aa7.96□□□□□ -1.14
LTN1-206ENST00000486427 SFMBT1Q9UHJ3 866 aa7.96□□□□□ -1.14
LTN1-206ENST00000486427 CBLCQ9ULV8 474 aa7.96□□□□□ -1.14
LTN1-206ENST00000486427 WASF3Q9UPY6 502 aa7.96□□□□□ -1.14
LTN1-206ENST00000486427 PYGMP11217 842 aa7.95□□□□□ -1.14
LTN1-206ENST00000486427 FBLN7Q53RD9 439 aa7.95□□□□□ -1.14
LTN1-206ENST00000486427 BRAPQ7Z569 592 aa7.95□□□□□ -1.14
LTN1-206ENST00000486427 FGD2Q7Z6J4 655 aa7.95□□□□□ -1.14
LTN1-206ENST00000486427 FBXW5Q969U6 566 aa7.95□□□□□ -1.14
LTN1-206ENST00000486427 RBPJLQ9UBG7 517 aa7.95□□□□□ -1.14
LTN1-206ENST00000486427 DSEQ9UL01 958 aa7.95□□□□□ -1.14
LTN1-206ENST00000486427 EFCAB14O75071 495 aa7.94□□□□□ -1.14
LTN1-206ENST00000486427 RAPGEF3O95398 923 aa7.94□□□□□ -1.14
LTN1-206ENST00000486427 NKX3-2P78367 333 aa7.94□□□□□ -1.14
LTN1-206ENST00000486427 TRIM48Q8IWZ4 208 aa7.94□□□□□ -1.14
LTN1-206ENST00000486427 MARCH10Q8NA82 808 aaPredicted RBP7.94□□□□□ -1.14
LTN1-206ENST00000486427 TTLL11Q8NHH1 800 aa7.94□□□□□ -1.14
LTN1-206ENST00000486427 RNPC3Q96LT9 517 aaKnown RBP7.94□□□□□ -1.14
LTN1-206ENST00000486427 CLUHP3Q96NS8 147 aa7.94□□□□□ -1.14
LTN1-206ENST00000486427 KCNC2Q96PR1 638 aa7.94□□□□□ -1.14
LTN1-206ENST00000486427 TRIM39Q9HCM9 518 aa7.94□□□□□ -1.14
LTN1-206ENST00000486427 ESYT3A0FGR9 886 aa7.93□□□□□ -1.14
LTN1-206ENST00000486427 SH3D21A4FU49 640 aa7.93□□□□□ -1.14
LTN1-206ENST00000486427 KCNQ2O43526 872 aa7.93□□□□□ -1.14
LTN1-206ENST00000486427 AMY2AP04746 511 aa7.93□□□□□ -1.14
LTN1-206ENST00000486427 CKMP06732 381 aa7.93□□□□□ -1.14
LTN1-206ENST00000486427 PDE6AP16499 860 aa7.93□□□□□ -1.14
LTN1-206ENST00000486427 NAT1P18440 290 aa7.93□□□□□ -1.14
LTN1-206ENST00000486427 AMY2BP19961 511 aa7.93□□□□□ -1.14
LTN1-206ENST00000486427 ADAM9Q13443 819 aa7.93□□□□□ -1.14
LTN1-206ENST00000486427 LIPIQ6XZB0 460 aa7.93□□□□□ -1.14
LTN1-206ENST00000486427 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.93□□□□□ -1.14
LTN1-206ENST00000486427 PROSER1Q86XN7 944 aa7.93□□□□□ -1.14
LTN1-206ENST00000486427 ZC3H7AQ8IWR0 971 aaKnown RBP7.93□□□□□ -1.14
LTN1-206ENST00000486427 KYQ8NBH2 561 aa7.93□□□□□ -1.14
LTN1-206ENST00000486427 NGRNQ9NPE2 291 aaKnown RBP7.93□□□□□ -1.14
LTN1-206ENST00000486427 CATSPERZQ9NTU4 200 aa7.93□□□□□ -1.14
LTN1-206ENST00000486427 TMEM260Q9NX78 707 aa7.93□□□□□ -1.14
LTN1-206ENST00000486427 CCDC66A2RUB6 948 aa7.92□□□□□ -1.14
LTN1-206ENST00000486427 PLD2O14939 933 aa7.92□□□□□ -1.14
LTN1-206ENST00000486427 PPP1R12AO14974 1030 aaPredicted RBP7.92□□□□□ -1.14
LTN1-206ENST00000486427 THBS2P35442 1172 aa7.92□□□□□ -1.14
LTN1-206ENST00000486427 DNM2P50570 870 aa7.92□□□□□ -1.14
LTN1-206ENST00000486427 EPHA5P54756 1037 aa7.92□□□□□ -1.14
LTN1-206ENST00000486427 SLURP1P55000 103 aa7.92□□□□□ -1.14
LTN1-206ENST00000486427 GPR19Q15760 415 aa7.92□□□□□ -1.14
LTN1-206ENST00000486427 ARHGAP36Q6ZRI8 547 aa7.92□□□□□ -1.14
LTN1-206ENST00000486427 KCTD1Q719H9 257 aa7.92□□□□□ -1.14
LTN1-206ENST00000486427 C16orf59Q7L2K0 433 aa7.92□□□□□ -1.14
LTN1-206ENST00000486427 OSTM1Q86WC4 334 aa7.92□□□□□ -1.14
LTN1-206ENST00000486427 PTRH1Q86Y79 214 aaKnown RBP7.92□□□□□ -1.14
LTN1-206ENST00000486427 SYT8Q8NBV8 401 aa7.92□□□□□ -1.14
LTN1-206ENST00000486427 MAGEB10Q96LZ2 347 aaPredicted RBP7.92□□□□□ -1.14
LTN1-206ENST00000486427 PDGFDQ9GZP0 370 aaPredicted RBP7.92□□□□□ -1.14
LTN1-206ENST00000486427 PCDH18Q9HCL0 1135 aa7.92□□□□□ -1.14
LTN1-206ENST00000486427 USP35Q9P2H5 1018 aa7.92□□□□□ -1.14
LTN1-206ENST00000486427 TCRBV16S1A1N1A0A5B0 115 aa7.91□□□□□ -1.14
LTN1-206ENST00000486427 ACOT7O00154 380 aa7.91□□□□□ -1.14
LTN1-206ENST00000486427 MAN2B1O00754 1011 aa7.91□□□□□ -1.14
LTN1-206ENST00000486427 KCNA6P17658 529 aa7.91□□□□□ -1.14
LTN1-206ENST00000486427 KRT15P19012 456 aa7.91□□□□□ -1.14
LTN1-206ENST00000486427 JAM2P57087 298 aa7.91□□□□□ -1.14
LTN1-206ENST00000486427 RTP5Q14D33 572 aa7.91□□□□□ -1.14
LTN1-206ENST00000486427 PAN2Q504Q3 1202 aaKnown RBP7.91□□□□□ -1.14
LTN1-206ENST00000486427 ABHD17CQ6PCB6 329 aa7.91□□□□□ -1.14
LTN1-206ENST00000486427 TMC5Q6UXY8 1006 aa7.91□□□□□ -1.14
LTN1-206ENST00000486427 ZSWIM3Q96MP5 696 aa7.91□□□□□ -1.14
LTN1-206ENST00000486427 SPATA25Q9BR10 227 aa7.91□□□□□ -1.14
LTN1-206ENST00000486427 SMURF1Q9HCE7 757 aa7.91□□□□□ -1.14
LTN1-206ENST00000486427 HSPBP1Q9NZL4 362 aa7.91□□□□□ -1.14
LTN1-206ENST00000486427 SRPK3Q9UPE1 567 aa7.91□□□□□ -1.14
LTN1-206ENST00000486427 COQ6Q9Y2Z9 468 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 6 ms