RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 SMAD3P84022 425 aaKnown RBP14.74□□□□□ -0.05
CHMP3-208ENST00000486404 SEMA3FQ13275 785 aa14.74□□□□□ -0.05
CHMP3-208ENST00000486404 TMEM240Q5SV17 173 aa14.74□□□□□ -0.05
CHMP3-208ENST00000486404 GDF6Q6KF10 455 aaPredicted RBP14.74□□□□□ -0.05
CHMP3-208ENST00000486404 TYW1BQ6NUM6 668 aa14.74□□□□□ -0.05
CHMP3-208ENST00000486404 TRIM22Q8IYM9 498 aa14.74□□□□□ -0.05
CHMP3-208ENST00000486404 RPUSD2Q8IZ73 545 aaKnown RBP14.74□□□□□ -0.05
CHMP3-208ENST00000486404 CCDC148Q8NFR7 591 aa14.74□□□□□ -0.05
CHMP3-208ENST00000486404 PHKBQ93100 1093 aa14.74□□□□□ -0.05
CHMP3-208ENST00000486404 PGBD1Q96JS3 809 aa14.74□□□□□ -0.05
CHMP3-208ENST00000486404 SLC26A6Q9BXS9 759 aa14.74□□□□□ -0.05
CHMP3-208ENST00000486404 TM6SF1Q9BZW5 370 aa14.74□□□□□ -0.05
CHMP3-208ENST00000486404 PDRG1Q9NUG6 133 aa14.74□□□□□ -0.05
CHMP3-208ENST00000486404 HDAC6Q9UBN7 1215 aa14.74□□□□□ -0.05
CHMP3-208ENST00000486404 GTF2IRD1Q9UHL9 959 aa14.74□□□□□ -0.05
CHMP3-208ENST00000486404 ZBBXA8MT70 800 aa14.73□□□□□ -0.05
CHMP3-208ENST00000486404 PFKMP08237 780 aa14.73□□□□□ -0.05
CHMP3-208ENST00000486404 RFC2P35250 354 aa14.73□□□□□ -0.05
CHMP3-208ENST00000486404 CCT2P78371 535 aaKnown RBP14.73□□□□□ -0.05
CHMP3-208ENST00000486404 CPLX2Q6PUV4 134 aaKnown RBP14.73□□□□□ -0.05
CHMP3-208ENST00000486404 ZNF365Q70YC5 407 aa14.73□□□□□ -0.05
CHMP3-208ENST00000486404 DEFB128Q7Z7B8 93 aa14.73□□□□□ -0.05
CHMP3-208ENST00000486404 REXO1Q8N1G1 1221 aaKnown RBP14.73□□□□□ -0.05
CHMP3-208ENST00000486404 CAGE1Q8TC20 777 aa14.73□□□□□ -0.05
CHMP3-208ENST00000486404 SENP7Q9BQF6 1050 aa14.73□□□□□ -0.05
CHMP3-208ENST00000486404 RNF26Q9BY78 433 aaPredicted RBP14.73□□□□□ -0.05
CHMP3-208ENST00000486404 NCOA5Q9HCD5 579 aaKnown RBP14.73□□□□□ -0.05
CHMP3-208ENST00000486404 C6orf50Q9HD87 102 aa14.73□□□□□ -0.05
CHMP3-208ENST00000486404 ESYT2A0FGR8 921 aa14.72□□□□□ -0.05
CHMP3-208ENST00000486404 H3BRB1 525 aa14.72□□□□□ -0.05
CHMP3-208ENST00000486404 HAS3O00219 553 aa14.72□□□□□ -0.05
CHMP3-208ENST00000486404 PRPF3O43395 683 aaKnown RBP14.72□□□□□ -0.05
CHMP3-208ENST00000486404 PPFIA3O75145 1194 aa14.72□□□□□ -0.05
CHMP3-208ENST00000486404 FGBP02675 491 aa14.72□□□□□ -0.05
CHMP3-208ENST00000486404 ACTN1P12814 892 aa14.72□□□□□ -0.05
CHMP3-208ENST00000486404 ITGB5P18084 799 aa14.72□□□□□ -0.05
CHMP3-208ENST00000486404 PDIA3P30101 505 aaKnown RBP14.72□□□□□ -0.05
CHMP3-208ENST00000486404 ZNF76P36508 570 aa14.72□□□□□ -0.05
CHMP3-208ENST00000486404 TOB2Q14106 344 aaPredicted RBP14.72□□□□□ -0.05
CHMP3-208ENST00000486404 UTP14CQ5TAP6 766 aaKnown RBP14.72□□□□□ -0.05
CHMP3-208ENST00000486404 AFAP1L1Q8TED9 768 aa14.72□□□□□ -0.05
CHMP3-208ENST00000486404 FAM161BQ96MY7 647 aa14.72□□□□□ -0.05
CHMP3-208ENST00000486404 GPR20Q99678 358 aa14.72□□□□□ -0.05
CHMP3-208ENST00000486404 TUT1Q9H6E5 874 aaKnown RBP14.72□□□□□ -0.05
CHMP3-208ENST00000486404 JADE2Q9NQC1 790 aa14.72□□□□□ -0.05
CHMP3-208ENST00000486404 TMEM260Q9NX78 707 aa14.72□□□□□ -0.05
CHMP3-208ENST00000486404 UBIAD1Q9Y5Z9 338 aa14.72□□□□□ -0.05
CHMP3-208ENST00000486404 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.71□□□□□ -0.05
CHMP3-208ENST00000486404 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.71□□□□□ -0.05
CHMP3-208ENST00000486404 C17orf102A2RUQ5 167 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 KCNA2P16389 499 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 IFNAR1P17181 557 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 GNA11P29992 359 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 SREBF1P36956 1147 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 EVCP57679 992 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 STK3Q13188 491 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 JAKMIP3Q5VZ66 844 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 MCTP2Q6DN12 878 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 FAM109BQ6ICB4 259 aaPredicted RBP14.71□□□□□ -0.05
CHMP3-208ENST00000486404 LRRC8DQ7L1W4 858 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 C16orf59Q7L2K0 433 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 OTOP2Q7RTS6 562 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 TRIM50Q86XT4 487 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 BICD2Q8TD16 824 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 HERVK_113Q902F9 699 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 MXRA8Q9BRK3 442 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 SDF4Q9BRK5 362 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 C16orf70Q9BSU1 422 aa14.71□□□□□ -0.05
CHMP3-208ENST00000486404 FTOQ9C0B1 505 aaKnown RBP eCLIP14.71□□□□□ -0.05
CHMP3-208ENST00000486404 JPH1Q9HDC5 661 aaPredicted RBP14.71□□□□□ -0.05
CHMP3-208ENST00000486404 LAMA2P24043 3122 aaKnown RBP14.71□□□□□ -0.05
CHMP3-208ENST00000486404 MAFGO15525 162 aa14.7□□□□□ -0.06
CHMP3-208ENST00000486404 CDKL5O76039 1030 aa14.7□□□□□ -0.06
CHMP3-208ENST00000486404 SMIM10L2AP0DMW4 78 aa14.7□□□□□ -0.06
CHMP3-208ENST00000486404 SMIM10L2BP0DMW5 78 aa14.7□□□□□ -0.06
CHMP3-208ENST00000486404 SELPP16109 830 aa14.7□□□□□ -0.06
CHMP3-208ENST00000486404 DNAJB2P25686 324 aa14.7□□□□□ -0.06
CHMP3-208ENST00000486404 TCF7P36402 384 aaPredicted RBP14.7□□□□□ -0.06
CHMP3-208ENST00000486404 ANAPC15P60006 121 aa14.7□□□□□ -0.06
CHMP3-208ENST00000486404 ARHGAP4P98171 946 aa14.7□□□□□ -0.06
CHMP3-208ENST00000486404 SSRP1Q08945 709 aaKnown RBP14.7□□□□□ -0.06
CHMP3-208ENST00000486404 PTK7Q13308 1070 aa14.7□□□□□ -0.06
CHMP3-208ENST00000486404 CEP55Q53EZ4 464 aa14.7□□□□□ -0.06
CHMP3-208ENST00000486404 ZMYND12Q9H0C1 365 aa14.7□□□□□ -0.06
CHMP3-208ENST00000486404 BCAS3Q9H6U6 928 aa14.7□□□□□ -0.06
CHMP3-208ENST00000486404 MYH9P35579 1960 aaKnown RBP14.69□□□□□ -0.06
CHMP3-208ENST00000486404 TMEM265A0A087WTH1 108 aa14.69□□□□□ -0.06
CHMP3-208ENST00000486404 IQCF3P0C7M6 154 aa14.69□□□□□ -0.06
CHMP3-208ENST00000486404 GNAT1P11488 350 aa14.69□□□□□ -0.06
CHMP3-208ENST00000486404 CLK2P49760 499 aaKnown RBP14.69□□□□□ -0.06
CHMP3-208ENST00000486404 NTRK3Q16288 839 aa14.69□□□□□ -0.06
CHMP3-208ENST00000486404 PKN1Q16512 942 aa14.69□□□□□ -0.06
CHMP3-208ENST00000486404 GLG1Q92896 1179 aa14.69□□□□□ -0.06
CHMP3-208ENST00000486404 ATP6V0A1Q93050 837 aa14.69□□□□□ -0.06
CHMP3-208ENST00000486404 ZNF274Q96GC6 653 aaPredicted RBP14.69□□□□□ -0.06
CHMP3-208ENST00000486404 LARP6Q9BRS8 491 aaKnown RBP14.69□□□□□ -0.06
CHMP3-208ENST00000486404 KCNH7Q9NS40 1196 aa14.69□□□□□ -0.06
CHMP3-208ENST00000486404 MTMR10Q9NXD2 777 aa14.69□□□□□ -0.06
CHMP3-208ENST00000486404 CXXC1Q9P0U4 656 aaPredicted RBP14.69□□□□□ -0.06
CHMP3-208ENST00000486404 VPS54Q9P1Q0 977 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms