RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 TUT1Q9H6E5 874 aaKnown RBP21.11■□□□□ 0.97
PRPF40A-209ENST00000486100 EHMT1Q9H9B1 1298 aa21.11■□□□□ 0.97
PRPF40A-209ENST00000486100 BARHL2Q9NY43 387 aa21.11■□□□□ 0.97
PRPF40A-209ENST00000486100 UBIAD1Q9Y5Z9 338 aa21.11■□□□□ 0.97
PRPF40A-209ENST00000486100 SMCO2A6NFE2 343 aa21.1■□□□□ 0.97
PRPF40A-209ENST00000486100 STXBP3O00186 592 aa21.1■□□□□ 0.97
PRPF40A-209ENST00000486100 MAFGO15525 162 aa21.1■□□□□ 0.97
PRPF40A-209ENST00000486100 LGALS2P05162 132 aa21.1■□□□□ 0.97
PRPF40A-209ENST00000486100 RBL2Q08999 1139 aa21.1■□□□□ 0.97
PRPF40A-209ENST00000486100 PTK7Q13308 1070 aa21.1■□□□□ 0.97
PRPF40A-209ENST00000486100 DHX38Q92620 1227 aaKnown RBP21.1■□□□□ 0.97
PRPF40A-209ENST00000486100 TIFAQ96CG3 184 aa21.1■□□□□ 0.97
PRPF40A-209ENST00000486100 GLT8D2Q9H1C3 349 aa21.1■□□□□ 0.97
PRPF40A-209ENST00000486100 SLC4A7Q9Y6M7 1214 aa21.1■□□□□ 0.97
PRPF40A-209ENST00000486100 ATP9AO75110 1047 aa21.09■□□□□ 0.97
PRPF40A-209ENST00000486100 FOSP01100 380 aaPredicted RBP21.09■□□□□ 0.97
PRPF40A-209ENST00000486100 ACTN1P12814 892 aa21.09■□□□□ 0.97
PRPF40A-209ENST00000486100 PBX2P40425 430 aa21.09■□□□□ 0.97
PRPF40A-209ENST00000486100 ADCY7P51828 1080 aa21.09■□□□□ 0.97
PRPF40A-209ENST00000486100 ZNF200P98182 395 aaPredicted RBP21.09■□□□□ 0.97
PRPF40A-209ENST00000486100 JADE2Q9NQC1 790 aa21.09■□□□□ 0.97
PRPF40A-209ENST00000486100 ZBBXA8MT70 800 aa21.08■□□□□ 0.97
PRPF40A-209ENST00000486100 PARNO95453 639 aaKnown RBP21.08■□□□□ 0.97
PRPF40A-209ENST00000486100 CKBP12277 381 aa21.08■□□□□ 0.97
PRPF40A-209ENST00000486100 SELPP16109 830 aa21.08■□□□□ 0.97
PRPF40A-209ENST00000486100 KCNA2P16389 499 aa21.08■□□□□ 0.97
PRPF40A-209ENST00000486100 EVCP57679 992 aa21.08■□□□□ 0.97
PRPF40A-209ENST00000486100 MTMR1Q13613 665 aa21.08■□□□□ 0.97
PRPF40A-209ENST00000486100 HIC1Q14526 733 aa21.08■□□□□ 0.97
PRPF40A-209ENST00000486100 PFKFB3Q16875 520 aaPredicted RBP21.08■□□□□ 0.97
PRPF40A-209ENST00000486100 RUFY3Q7L099 469 aa21.08■□□□□ 0.97
PRPF40A-209ENST00000486100 FTOQ9C0B1 505 aaKnown RBP eCLIP21.08■□□□□ 0.97
PRPF40A-209ENST00000486100 ZNF576Q9H609 170 aa21.08■□□□□ 0.97
PRPF40A-209ENST00000486100 ZSWIM6Q9HCJ5 1215 aa21.08■□□□□ 0.97
PRPF40A-209ENST00000486100 MSRAQ9UJ68 235 aa21.08■□□□□ 0.97
PRPF40A-209ENST00000486100 C17orf102A2RUQ5 167 aa21.07■□□□□ 0.96
PRPF40A-209ENST00000486100 PRPF3O43395 683 aaKnown RBP21.07■□□□□ 0.96
PRPF40A-209ENST00000486100 SCG2P13521 617 aa21.07■□□□□ 0.96
PRPF40A-209ENST00000486100 GPNMBQ14956 572 aa21.07■□□□□ 0.96
PRPF40A-209ENST00000486100 RAB30Q15771 203 aa21.07■□□□□ 0.96
PRPF40A-209ENST00000486100 LRRC8DQ7L1W4 858 aa21.07■□□□□ 0.96
PRPF40A-209ENST00000486100 SLC17A8Q8NDX2 589 aa21.07■□□□□ 0.96
PRPF40A-209ENST00000486100 MXRA8Q9BRK3 442 aa21.07■□□□□ 0.96
PRPF40A-209ENST00000486100 TELO2Q9Y4R8 837 aa21.07■□□□□ 0.96
PRPF40A-209ENST00000486100 NID2Q14112 1375 aa21.07■□□□□ 0.96
PRPF40A-209ENST00000486100 SMIM10L2AP0DMW4 78 aa21.06■□□□□ 0.96
PRPF40A-209ENST00000486100 SMIM10L2BP0DMW5 78 aa21.06■□□□□ 0.96
PRPF40A-209ENST00000486100 PDIA3P30101 505 aaKnown RBP21.06■□□□□ 0.96
PRPF40A-209ENST00000486100 HOXC8P31273 242 aa21.06■□□□□ 0.96
PRPF40A-209ENST00000486100 CLK2P49760 499 aaKnown RBP21.06■□□□□ 0.96
PRPF40A-209ENST00000486100 SP4Q02446 784 aa21.06■□□□□ 0.96
PRPF40A-209ENST00000486100 GRIN2CQ14957 1233 aa21.06■□□□□ 0.96
PRPF40A-209ENST00000486100 TRIM71Q2Q1W2 868 aaKnown RBP21.06■□□□□ 0.96
PRPF40A-209ENST00000486100 UTP14CQ5TAP6 766 aaKnown RBP21.06■□□□□ 0.96
PRPF40A-209ENST00000486100 MYLIPQ8WY64 445 aa21.06■□□□□ 0.96
PRPF40A-209ENST00000486100 SEPT1Q8WYJ6 367 aa21.06■□□□□ 0.96
PRPF40A-209ENST00000486100 ANO3Q9BYT9 981 aa21.06■□□□□ 0.96
PRPF40A-209ENST00000486100 TM6SF1Q9BZW5 370 aa21.06■□□□□ 0.96
PRPF40A-209ENST00000486100 RNPEPQ9H4A4 650 aa21.06■□□□□ 0.96
PRPF40A-209ENST00000486100 ZNF215Q9UL58 517 aaPredicted RBP21.06■□□□□ 0.96
PRPF40A-209ENST00000486100 CYP46A1Q9Y6A2 500 aa21.06■□□□□ 0.96
PRPF40A-209ENST00000486100 ATP2A2P16615 1042 aaKnown RBP21.05■□□□□ 0.96
PRPF40A-209ENST00000486100 AP3B2Q13367 1082 aa21.05■□□□□ 0.96
PRPF40A-209ENST00000486100 NTRK3Q16288 839 aa21.05■□□□□ 0.96
PRPF40A-209ENST00000486100 PKN1Q16512 942 aa21.05■□□□□ 0.96
PRPF40A-209ENST00000486100 SERINC5Q86VE9 423 aa21.05■□□□□ 0.96
PRPF40A-209ENST00000486100 ATP6V0A1Q93050 837 aa21.05■□□□□ 0.96
PRPF40A-209ENST00000486100 WNT8BQ93098 351 aa21.05■□□□□ 0.96
PRPF40A-209ENST00000486100 PGBD1Q96JS3 809 aa21.05■□□□□ 0.96
PRPF40A-209ENST00000486100 MYH7BA7E2Y1 1941 aa21.04■□□□□ 0.96
PRPF40A-209ENST00000486100 GNAT1P11488 350 aa21.04■□□□□ 0.96
PRPF40A-209ENST00000486100 TCF7P36402 384 aaPredicted RBP21.04■□□□□ 0.96
PRPF40A-209ENST00000486100 AKAP17AQ02040 695 aaKnown RBP21.04■□□□□ 0.96
PRPF40A-209ENST00000486100 TOB2Q14106 344 aaPredicted RBP21.04■□□□□ 0.96
PRPF40A-209ENST00000486100 ZNF618Q5T7W0 954 aa21.04■□□□□ 0.96
PRPF40A-209ENST00000486100 TRIM50Q86XT4 487 aa21.04■□□□□ 0.96
PRPF40A-209ENST00000486100 CYP2W1Q8TAV3 490 aa21.04■□□□□ 0.96
PRPF40A-209ENST00000486100 PHOSPHO2Q8TCD6 241 aa21.04■□□□□ 0.96
PRPF40A-209ENST00000486100 CCDC12Q8WUD4 166 aaPredicted RBP21.04■□□□□ 0.96
PRPF40A-209ENST00000486100 ZMYND12Q9H0C1 365 aa21.04■□□□□ 0.96
PRPF40A-209ENST00000486100 KCNH7Q9NS40 1196 aa21.04■□□□□ 0.96
PRPF40A-209ENST00000486100 TMEM260Q9NX78 707 aa21.04■□□□□ 0.96
PRPF40A-209ENST00000486100 PKD2L1Q9P0L9 805 aa21.04■□□□□ 0.96
PRPF40A-209ENST00000486100 COL6A3P12111 3177 aa21.04■□□□□ 0.96
PRPF40A-209ENST00000486100 GSTTP1A0A1W2PQM5 241 aa21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 ESYT2A0FGR8 921 aa21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 NBNO60934 754 aa21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 BAIAP3O94812 1187 aa21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 CXCL10P02778 98 aa21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 CENPBP07199 599 aaPredicted RBP21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 IFNAR1P17181 557 aa21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 SREBF1P36956 1147 aa21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 RABGGTBP53611 331 aa21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 CEP55Q53EZ4 464 aa21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 TRAF7Q6Q0C0 670 aa21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 PHKBQ93100 1093 aa21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 RNF26Q9BY78 433 aaPredicted RBP21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 NKX2-4Q9H2Z4 354 aa21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 C6orf50Q9HD87 102 aa21.03■□□□□ 0.96
PRPF40A-209ENST00000486100 SETD4Q9NVD3 440 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 592.4 ms