RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 C5orf67F2Z3F1 127 aa22.45■■□□□ 1.18
CHRD-216ENST00000486066 TREHO43280 583 aa22.45■■□□□ 1.18
CHRD-216ENST00000486066 KDM4AO75164 1064 aa22.45■■□□□ 1.18
CHRD-216ENST00000486066 CFBP00751 764 aa22.45■■□□□ 1.18
CHRD-216ENST00000486066 PGM5Q15124 567 aa22.45■■□□□ 1.18
CHRD-216ENST00000486066 CCDC178Q5BJE1 867 aa22.45■■□□□ 1.18
CHRD-216ENST00000486066 ZSCAN10Q96SZ4 725 aaPredicted RBP22.45■■□□□ 1.18
CHRD-216ENST00000486066 RNPEPQ9H4A4 650 aa22.45■■□□□ 1.18
CHRD-216ENST00000486066 BCAS3Q9H6U6 928 aa22.45■■□□□ 1.18
CHRD-216ENST00000486066 C17orf102A2RUQ5 167 aa22.44■■□□□ 1.18
CHRD-216ENST00000486066 H3BRB1 525 aa22.44■■□□□ 1.18
CHRD-216ENST00000486066 SMIM10L2AP0DMW4 78 aa22.44■■□□□ 1.18
CHRD-216ENST00000486066 SMIM10L2BP0DMW5 78 aa22.44■■□□□ 1.18
CHRD-216ENST00000486066 SLC35G1Q2M3R5 365 aa22.44■■□□□ 1.18
CHRD-216ENST00000486066 ANKRD45Q5TZF3 282 aa22.44■■□□□ 1.18
CHRD-216ENST00000486066 DIEXFQ68CQ4 756 aaKnown RBP22.44■■□□□ 1.18
CHRD-216ENST00000486066 IQCA1Q86XH1 822 aa22.44■■□□□ 1.18
CHRD-216ENST00000486066 STAG2Q8N3U4 1231 aa22.44■■□□□ 1.18
CHRD-216ENST00000486066 SAMD3Q8N6K7 520 aa22.44■■□□□ 1.18
CHRD-216ENST00000486066 SEPT8Q92599 483 aa22.44■■□□□ 1.18
CHRD-216ENST00000486066 ATP6V0A1Q93050 837 aa22.44■■□□□ 1.18
CHRD-216ENST00000486066 AMNQ9BXJ7 453 aa22.44■■□□□ 1.18
CHRD-216ENST00000486066 TUT1Q9H6E5 874 aaKnown RBP22.44■■□□□ 1.18
CHRD-216ENST00000486066 KAT14Q9H8E8 782 aa22.44■■□□□ 1.18
CHRD-216ENST00000486066 TTC3P53804 2025 aa22.43■■□□□ 1.18
CHRD-216ENST00000486066 FRMPD4Q14CM0 1322 aa22.43■■□□□ 1.18
CHRD-216ENST00000486066 LGALS2P05162 132 aa22.43■■□□□ 1.18
CHRD-216ENST00000486066 PARP1P09874 1014 aaKnown RBP22.43■■□□□ 1.18
CHRD-216ENST00000486066 IRS1P35568 1242 aa22.43■■□□□ 1.18
CHRD-216ENST00000486066 FAM26DQ5JW98 314 aa22.43■■□□□ 1.18
CHRD-216ENST00000486066 YME1L1Q96TA2 773 aa22.43■■□□□ 1.18
CHRD-216ENST00000486066 ZSWIM5Q9P217 1185 aa22.43■■□□□ 1.18
CHRD-216ENST00000486066 DMDP11532 3685 aa22.43■■□□□ 1.18
CHRD-216ENST00000486066 BAZ2BQ9UIF8 2168 aaKnown RBP22.42■■□□□ 1.18
CHRD-216ENST00000486066 B4E1Z4 1266 aa22.42■■□□□ 1.18
CHRD-216ENST00000486066 ZNF213O14771 459 aa22.42■■□□□ 1.18
CHRD-216ENST00000486066 SORBS3O60504 671 aa22.42■■□□□ 1.18
CHRD-216ENST00000486066 SMAD2Q15796 467 aaKnown RBP22.42■■□□□ 1.18
CHRD-216ENST00000486066 HFE2Q6ZVN8 426 aa22.42■■□□□ 1.18
CHRD-216ENST00000486066 MYCLP12524 364 aaPredicted RBP22.41■■□□□ 1.18
CHRD-216ENST00000486066 DLX2Q07687 328 aaPredicted RBP22.41■■□□□ 1.18
CHRD-216ENST00000486066 RPAINQ86UA6 219 aa22.41■■□□□ 1.18
CHRD-216ENST00000486066 APBB2Q92870 758 aa22.41■■□□□ 1.18
CHRD-216ENST00000486066 UIMC1Q96RL1 719 aa22.41■■□□□ 1.18
CHRD-216ENST00000486066 VAT1LQ9HCJ6 419 aa22.41■■□□□ 1.18
CHRD-216ENST00000486066 FAM50BQ9Y247 325 aa22.41■■□□□ 1.18
CHRD-216ENST00000486066 KIAA1671Q9BY89 1806 aa22.41■■□□□ 1.18
CHRD-216ENST00000486066 ZBTB5O15062 677 aa22.4■■□□□ 1.18
CHRD-216ENST00000486066 SDSP20132 328 aa22.4■■□□□ 1.18
CHRD-216ENST00000486066 HOXA13P31271 388 aaPredicted RBP22.4■■□□□ 1.18
CHRD-216ENST00000486066 ICAM3P32942 547 aa22.4■■□□□ 1.18
CHRD-216ENST00000486066 HYAL1Q12794 435 aa22.4■■□□□ 1.18
CHRD-216ENST00000486066 SEMA3FQ13275 785 aa22.4■■□□□ 1.18
CHRD-216ENST00000486066 HDAC1Q13547 482 aaPredicted RBP22.4■■□□□ 1.18
CHRD-216ENST00000486066 SEC23AQ15436 765 aa22.4■■□□□ 1.18
CHRD-216ENST00000486066 CSPP1Q1MSJ5 1256 aa22.4■■□□□ 1.18
CHRD-216ENST00000486066 HERC4Q5GLZ8 1057 aaPredicted RBP22.4■■□□□ 1.18
CHRD-216ENST00000486066 CLP1Q92989 425 aaKnown RBP22.4■■□□□ 1.18
CHRD-216ENST00000486066 IFIH1Q9BYX4 1025 aaKnown RBP22.4■■□□□ 1.18
CHRD-216ENST00000486066 LMAN2LQ9H0V9 348 aa22.4■■□□□ 1.18
CHRD-216ENST00000486066 CLDND1Q9NY35 253 aa22.4■■□□□ 1.18
CHRD-216ENST00000486066 MAD2L2Q9UI95 211 aa22.4■■□□□ 1.18
CHRD-216ENST00000486066 KAT6AQ92794 2004 aa22.4■■□□□ 1.18
CHRD-216ENST00000486066 PALM3A6NDB9 673 aaPredicted RBP22.39■■□□□ 1.17
CHRD-216ENST00000486066 NCK2O43639 380 aa22.39■■□□□ 1.17
CHRD-216ENST00000486066 UPP2O95045 317 aa22.39■■□□□ 1.17
CHRD-216ENST00000486066 RB1P06400 928 aa22.39■■□□□ 1.17
CHRD-216ENST00000486066 CTSHP09668 335 aa22.39■■□□□ 1.17
CHRD-216ENST00000486066 MRPS9P82933 396 aaKnown RBP22.39■■□□□ 1.17
CHRD-216ENST00000486066 INPP4AQ96PE3 977 aaPredicted RBP22.39■■□□□ 1.17
CHRD-216ENST00000486066 PCDHA1Q9Y5I3 950 aa22.39■■□□□ 1.17
CHRD-216ENST00000486066 ZDBF2Q9HCK1 2354 aa22.39■■□□□ 1.17
CHRD-216ENST00000486066 GRM6O15303 877 aa22.38■■□□□ 1.17
CHRD-216ENST00000486066 MBTPS2O43462 519 aa22.38■■□□□ 1.17
CHRD-216ENST00000486066 TBX10O75333 385 aa22.38■■□□□ 1.17
CHRD-216ENST00000486066 MFAP1P55081 439 aaKnown RBP22.38■■□□□ 1.17
CHRD-216ENST00000486066 CAMK1Q14012 370 aa22.38■■□□□ 1.17
CHRD-216ENST00000486066 ZFP91Q96JP5 570 aaPredicted RBP22.38■■□□□ 1.17
CHRD-216ENST00000486066 GPR20Q99678 358 aa22.38■■□□□ 1.17
CHRD-216ENST00000486066 USP26Q9BXU7 913 aa22.38■■□□□ 1.17
CHRD-216ENST00000486066 EHMT1Q9H9B1 1298 aa22.38■■□□□ 1.17
CHRD-216ENST00000486066 SETD4Q9NVD3 440 aa22.38■■□□□ 1.17
CHRD-216ENST00000486066 TELO2Q9Y4R8 837 aa22.38■■□□□ 1.17
CHRD-216ENST00000486066 CACNA1HO95180 2353 aa22.38■■□□□ 1.17
CHRD-216ENST00000486066 KLRF2D3W0D1 207 aa22.37■■□□□ 1.17
CHRD-216ENST00000486066 DHX16O60231 1041 aaKnown RBP22.37■■□□□ 1.17
CHRD-216ENST00000486066 CCND2P30279 289 aa22.37■■□□□ 1.17
CHRD-216ENST00000486066 BMPR1AP36894 532 aa22.37■■□□□ 1.17
CHRD-216ENST00000486066 METTL7BQ6UX53 244 aa22.37■■□□□ 1.17
CHRD-216ENST00000486066 ZNF689Q96CS4 500 aaPredicted RBP22.37■■□□□ 1.17
CHRD-216ENST00000486066 IL17RAQ96F46 866 aa22.37■■□□□ 1.17
CHRD-216ENST00000486066 RIOX1Q9H6W3 641 aa22.37■■□□□ 1.17
CHRD-216ENST00000486066 MLXIPQ9HAP2 919 aa22.37■■□□□ 1.17
CHRD-216ENST00000486066 ADGRA3Q8IWK6 1321 aa22.36■■□□□ 1.17
CHRD-216ENST00000486066 SPATA31C2B4DYI2 1134 aa22.36■■□□□ 1.17
CHRD-216ENST00000486066 CHRNA1P02708 482 aa22.36■■□□□ 1.17
CHRD-216ENST00000486066 MGAT3Q09327 533 aa22.36■■□□□ 1.17
CHRD-216ENST00000486066 CRIPAKQ8N1N5 446 aa22.36■■□□□ 1.17
CHRD-216ENST00000486066 FIBCD1Q8N539 461 aa22.36■■□□□ 1.17
CHRD-216ENST00000486066 LMBR1Q8WVP7 490 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms