RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 LAMA4Q16363 1823 aa18.77■□□□□ 0.59
PDE6D-205ENST00000486044 H3BNC9 293 aa18.76■□□□□ 0.59
PDE6D-205ENST00000486044 GCOM1H8Y6P7 765 aaPredicted RBP18.76■□□□□ 0.59
PDE6D-205ENST00000486044 NOP56O00567 594 aaKnown RBP18.76■□□□□ 0.59
PDE6D-205ENST00000486044 POLR2MP0CAP2 368 aa18.76■□□□□ 0.59
PDE6D-205ENST00000486044 UBA1P22314 1058 aaKnown RBP18.76■□□□□ 0.59
PDE6D-205ENST00000486044 HOXA13P31271 388 aaPredicted RBP18.76■□□□□ 0.59
PDE6D-205ENST00000486044 RRP1P56182 461 aaKnown RBP18.76■□□□□ 0.59
PDE6D-205ENST00000486044 SP2Q02086 613 aa18.76■□□□□ 0.59
PDE6D-205ENST00000486044 GPM6BQ13491 265 aa18.76■□□□□ 0.59
PDE6D-205ENST00000486044 GNPTABQ3T906 1256 aa18.76■□□□□ 0.59
PDE6D-205ENST00000486044 STAG2Q8N3U4 1231 aa18.76■□□□□ 0.59
PDE6D-205ENST00000486044 MTMR8Q96EF0 704 aa18.76■□□□□ 0.59
PDE6D-205ENST00000486044 NCK2O43639 380 aa18.75■□□□□ 0.59
PDE6D-205ENST00000486044 UPP2O95045 317 aa18.75■□□□□ 0.59
PDE6D-205ENST00000486044 SMIM10L2AP0DMW4 78 aa18.75■□□□□ 0.59
PDE6D-205ENST00000486044 SMIM10L2BP0DMW5 78 aa18.75■□□□□ 0.59
PDE6D-205ENST00000486044 EP400NLQ6ZTU2 488 aa18.75■□□□□ 0.59
PDE6D-205ENST00000486044 TMEM192Q8IY95 271 aa18.75■□□□□ 0.59
PDE6D-205ENST00000486044 APBB2Q92870 758 aa18.75■□□□□ 0.59
PDE6D-205ENST00000486044 PABPC5Q96DU9 382 aaKnown RBP18.75■□□□□ 0.59
PDE6D-205ENST00000486044 UIMC1Q96RL1 719 aa18.75■□□□□ 0.59
PDE6D-205ENST00000486044 RNPEPQ9H4A4 650 aa18.75■□□□□ 0.59
PDE6D-205ENST00000486044 H3BQ06 376 aaPredicted RBP18.74■□□□□ 0.59
PDE6D-205ENST00000486044 TREHO43280 583 aa18.74■□□□□ 0.59
PDE6D-205ENST00000486044 PPP1R11O60927 126 aaPredicted RBP18.74■□□□□ 0.59
PDE6D-205ENST00000486044 STAM2O75886 525 aa18.74■□□□□ 0.59
PDE6D-205ENST00000486044 LGALS2P05162 132 aa18.74■□□□□ 0.59
PDE6D-205ENST00000486044 HOXC8P31273 242 aa18.74■□□□□ 0.59
PDE6D-205ENST00000486044 NEDD9Q14511 834 aa18.74■□□□□ 0.59
PDE6D-205ENST00000486044 FCHSD1Q86WN1 690 aa18.74■□□□□ 0.59
PDE6D-205ENST00000486044 IFIH1Q9BYX4 1025 aaKnown RBP18.74■□□□□ 0.59
PDE6D-205ENST00000486044 NSUN3Q9H649 340 aaKnown RBP18.74■□□□□ 0.59
PDE6D-205ENST00000486044 PRKAG3Q9UGI9 489 aa18.74■□□□□ 0.59
PDE6D-205ENST00000486044 MUC6Q6W4X9 2439 aa18.73■□□□□ 0.59
PDE6D-205ENST00000486044 DCXO43602 365 aa18.73■□□□□ 0.59
PDE6D-205ENST00000486044 AAMPQ13685 434 aa18.73■□□□□ 0.59
PDE6D-205ENST00000486044 HOMER1Q86YM7 354 aa18.73■□□□□ 0.59
PDE6D-205ENST00000486044 IL31RAQ8NI17 732 aa18.73■□□□□ 0.59
PDE6D-205ENST00000486044 UPF3BQ9BZI7 483 aaKnown RBP18.73■□□□□ 0.59
PDE6D-205ENST00000486044 OSBPL3Q9H4L5 887 aa18.73■□□□□ 0.59
PDE6D-205ENST00000486044 MAD2L2Q9UI95 211 aa18.73■□□□□ 0.59
PDE6D-205ENST00000486044 ZNF215Q9UL58 517 aaPredicted RBP18.73■□□□□ 0.59
PDE6D-205ENST00000486044 PALM3A6NDB9 673 aaPredicted RBP18.72■□□□□ 0.59
PDE6D-205ENST00000486044 CTSHP09668 335 aa18.72■□□□□ 0.59
PDE6D-205ENST00000486044 TRDNQ13061 729 aa18.72■□□□□ 0.59
PDE6D-205ENST00000486044 TCEAL5Q5H9L2 206 aa18.72■□□□□ 0.59
PDE6D-205ENST00000486044 B4GALNT3Q6L9W6 998 aa18.72■□□□□ 0.59
PDE6D-205ENST00000486044 METTL7BQ6UX53 244 aa18.72■□□□□ 0.59
PDE6D-205ENST00000486044 IL17RAQ96F46 866 aa18.72■□□□□ 0.59
PDE6D-205ENST00000486044 RWDD1Q9H446 243 aaPredicted RBP18.72■□□□□ 0.59
PDE6D-205ENST00000486044 RWDD3Q9Y3V2 267 aa18.72■□□□□ 0.59
PDE6D-205ENST00000486044 COL4A6Q14031 1691 aa18.71■□□□□ 0.59
PDE6D-205ENST00000486044 RB1P06400 928 aa18.71■□□□□ 0.59
PDE6D-205ENST00000486044 ICAM3P32942 547 aa18.71■□□□□ 0.59
PDE6D-205ENST00000486044 COL19A1Q14993 1142 aa18.71■□□□□ 0.59
PDE6D-205ENST00000486044 SEC23AQ15436 765 aa18.71■□□□□ 0.59
PDE6D-205ENST00000486044 CHD1LQ86WJ1 897 aa18.71■□□□□ 0.59
PDE6D-205ENST00000486044 PLEKHM2Q8IWE5 1019 aa18.71■□□□□ 0.59
PDE6D-205ENST00000486044 SMC5Q8IY18 1101 aa18.71■□□□□ 0.59
PDE6D-205ENST00000486044 FIBCD1Q8N539 461 aa18.71■□□□□ 0.59
PDE6D-205ENST00000486044 GPKOWQ92917 476 aaPredicted RBP eCLIP18.71■□□□□ 0.59
PDE6D-205ENST00000486044 ZFP91Q96JP5 570 aaPredicted RBP18.71■□□□□ 0.59
PDE6D-205ENST00000486044 RIOX1Q9H6W3 641 aa18.71■□□□□ 0.59
PDE6D-205ENST00000486044 SETD4Q9NVD3 440 aa18.71■□□□□ 0.59
PDE6D-205ENST00000486044 PIEZO1Q92508 2521 aa18.71■□□□□ 0.59
PDE6D-205ENST00000486044 PNMA6FA0A0J9YX94 578 aa18.7■□□□□ 0.58
PDE6D-205ENST00000486044 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.7■□□□□ 0.58
PDE6D-205ENST00000486044 POTEB3A0JP26 581 aa18.7■□□□□ 0.58
PDE6D-205ENST00000486044 ERICH2A1L162 156 aa18.7■□□□□ 0.58
PDE6D-205ENST00000486044 SPATA31C2B4DYI2 1134 aa18.7■□□□□ 0.58
PDE6D-205ENST00000486044 FIBPO43427 364 aa18.7■□□□□ 0.58
PDE6D-205ENST00000486044 FAM26DQ5JW98 314 aa18.7■□□□□ 0.58
PDE6D-205ENST00000486044 POTEBQ6S5H4 581 aa18.7■□□□□ 0.58
PDE6D-205ENST00000486044 CYFIP1Q7L576 1253 aa18.7■□□□□ 0.58
PDE6D-205ENST00000486044 ALYREFQ86V81 257 aaKnown RBP18.7■□□□□ 0.58
PDE6D-205ENST00000486044 INPP4AQ96PE3 977 aaPredicted RBP18.7■□□□□ 0.58
PDE6D-205ENST00000486044 PIGSQ96S52 555 aa18.7■□□□□ 0.58
PDE6D-205ENST00000486044 C11orf84Q9BUA3 381 aaPredicted RBP18.7■□□□□ 0.58
PDE6D-205ENST00000486044 LMAN2LQ9H0V9 348 aa18.7■□□□□ 0.58
PDE6D-205ENST00000486044 KCNH6Q9H252 994 aa18.7■□□□□ 0.58
PDE6D-205ENST00000486044 CLDND1Q9NY35 253 aa18.7■□□□□ 0.58
PDE6D-205ENST00000486044 CTNNB1P35222 781 aa18.69■□□□□ 0.58
PDE6D-205ENST00000486044 ARHGAP4P98171 946 aa18.69■□□□□ 0.58
PDE6D-205ENST00000486044 ZP2Q05996 745 aa18.69■□□□□ 0.58
PDE6D-205ENST00000486044 GRM4Q14833 912 aa18.69■□□□□ 0.58
PDE6D-205ENST00000486044 ADHFE1Q8IWW8 467 aa18.69■□□□□ 0.58
PDE6D-205ENST00000486044 POP1Q99575 1024 aaKnown RBP18.69■□□□□ 0.58
PDE6D-205ENST00000486044 GPR20Q99678 358 aa18.69■□□□□ 0.58
PDE6D-205ENST00000486044 NRCAMQ92823 1304 aa18.69■□□□□ 0.58
PDE6D-205ENST00000486044 C5orf67F2Z3F1 127 aa18.68■□□□□ 0.58
PDE6D-205ENST00000486044 BMPR1AP36894 532 aa18.68■□□□□ 0.58
PDE6D-205ENST00000486044 MRPS9P82933 396 aaKnown RBP18.68■□□□□ 0.58
PDE6D-205ENST00000486044 GIMAP8Q8ND71 665 aaPredicted RBP18.68■□□□□ 0.58
PDE6D-205ENST00000486044 BCAS3Q9H6U6 928 aa18.68■□□□□ 0.58
PDE6D-205ENST00000486044 RTEL1Q9NZ71 1219 aa18.68■□□□□ 0.58
PDE6D-205ENST00000486044 RALGAPA2Q2PPJ7 1873 aa18.68■□□□□ 0.58
PDE6D-205ENST00000486044 NLRC5Q86WI3 1866 aa18.68■□□□□ 0.58
PDE6D-205ENST00000486044 C19orf67A6NJJ6 358 aa18.67■□□□□ 0.58
PDE6D-205ENST00000486044 IFIT3O14879 490 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms