RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 EPB41L5Q9HCM4 733 aa24.8■■□□□ 1.56
CLN5-202ENST00000485938 PCDHGC5Q9Y5F6 944 aa24.8■■□□□ 1.56
CLN5-202ENST00000485938 TNRC6CQ9HCJ0 1690 aaKnown RBP24.8■■□□□ 1.56
CLN5-202ENST00000485938 GRID2IPA4D2P6 1211 aa24.8■■□□□ 1.56
CLN5-202ENST00000485938 A6NNZ2 444 aa24.8■■□□□ 1.56
CLN5-202ENST00000485938 KLRC1P26715 233 aa24.8■■□□□ 1.56
CLN5-202ENST00000485938 GUCY2DQ02846 1103 aa24.8■■□□□ 1.56
CLN5-202ENST00000485938 FAM98CQ17RN3 349 aaKnown RBP24.8■■□□□ 1.56
CLN5-202ENST00000485938 TUBB8Q3ZCM7 444 aa24.8■■□□□ 1.56
CLN5-202ENST00000485938 FAM26FQ5R3K3 315 aa24.8■■□□□ 1.56
CLN5-202ENST00000485938 CEP63Q96MT8 703 aa24.8■■□□□ 1.56
CLN5-202ENST00000485938 CCDC43Q96MW1 224 aaKnown RBP24.8■■□□□ 1.56
CLN5-202ENST00000485938 GPR101Q96P66 508 aaPredicted RBP24.8■■□□□ 1.56
CLN5-202ENST00000485938 ESYT3A0FGR9 886 aa24.79■■□□□ 1.56
CLN5-202ENST00000485938 NFIXQ14938 502 aa24.79■■□□□ 1.56
CLN5-202ENST00000485938 SLC18A3Q16572 532 aa24.79■■□□□ 1.56
CLN5-202ENST00000485938 MEI1Q5TIA1 1274 aa24.79■■□□□ 1.56
CLN5-202ENST00000485938 PPP4R3AQ6IN85 833 aa24.79■■□□□ 1.56
CLN5-202ENST00000485938 MREGQ8N565 214 aa24.79■■□□□ 1.56
CLN5-202ENST00000485938 INPP4AQ96PE3 977 aaPredicted RBP24.79■■□□□ 1.56
CLN5-202ENST00000485938 PANK4Q9NVE7 773 aa24.79■■□□□ 1.56
CLN5-202ENST00000485938 ZNF233A6NK53 670 aa24.79■■□□□ 1.56
CLN5-202ENST00000485938 ZPR1O75312 459 aa24.79■■□□□ 1.56
CLN5-202ENST00000485938 KRT14P02533 472 aa24.79■■□□□ 1.56
CLN5-202ENST00000485938 APBA1Q02410 837 aa24.79■■□□□ 1.56
CLN5-202ENST00000485938 CFAP58Q5T655 872 aa24.79■■□□□ 1.56
CLN5-202ENST00000485938 TRIM59Q8IWR1 403 aa24.79■■□□□ 1.56
CLN5-202ENST00000485938 SH2D3CQ8N5H7 860 aa24.79■■□□□ 1.56
CLN5-202ENST00000485938 TBC1D5Q92609 795 aa24.79■■□□□ 1.56
CLN5-202ENST00000485938 FGFBP2Q9BYJ0 223 aa24.79■■□□□ 1.56
CLN5-202ENST00000485938 RPS6KA4O75676 772 aa24.78■■□□□ 1.56
CLN5-202ENST00000485938 TNNI2P48788 182 aa24.78■■□□□ 1.56
CLN5-202ENST00000485938 PDCLQ13371 301 aa24.78■■□□□ 1.56
CLN5-202ENST00000485938 IFT81Q8WYA0 676 aa24.78■■□□□ 1.56
CLN5-202ENST00000485938 PIK3R5Q8WYR1 880 aa24.78■■□□□ 1.56
CLN5-202ENST00000485938 HAS1Q92839 578 aa24.78■■□□□ 1.56
CLN5-202ENST00000485938 NHSQ6T4R5 1651 aa24.78■■□□□ 1.56
CLN5-202ENST00000485938 DNA2P51530 1060 aa24.78■■□□□ 1.56
CLN5-202ENST00000485938 MARSP56192 900 aaKnown RBP24.78■■□□□ 1.56
CLN5-202ENST00000485938 A0A087X0T9 212 aa24.77■■□□□ 1.56
CLN5-202ENST00000485938 FAM228BP0C875 321 aa24.77■■□□□ 1.56
CLN5-202ENST00000485938 RHBDL3P58872 404 aa24.77■■□□□ 1.56
CLN5-202ENST00000485938 GRAPQ13588 217 aa24.77■■□□□ 1.56
CLN5-202ENST00000485938 ASPRV1Q53RT3 343 aa24.77■■□□□ 1.56
CLN5-202ENST00000485938 ICE2Q659A1 982 aa24.77■■□□□ 1.56
CLN5-202ENST00000485938 KCTD16Q68DU8 428 aa24.77■■□□□ 1.56
CLN5-202ENST00000485938 BARGINQ6ZT62 677 aa24.77■■□□□ 1.56
CLN5-202ENST00000485938 MICALL1Q8N3F8 863 aa24.77■■□□□ 1.56
CLN5-202ENST00000485938 GRAPLQ8TC17 118 aaPredicted RBP24.77■■□□□ 1.56
CLN5-202ENST00000485938 CASKIN2Q8WXE0 1202 aa24.77■■□□□ 1.56
CLN5-202ENST00000485938 KRT12Q99456 494 aa24.77■■□□□ 1.56
CLN5-202ENST00000485938 GNA14O95837 355 aa24.77■■□□□ 1.56
CLN5-202ENST00000485938 C15orf52Q6ZUT6 534 aaKnown RBP24.77■■□□□ 1.56
CLN5-202ENST00000485938 CD302Q8IX05 232 aa24.77■■□□□ 1.56
CLN5-202ENST00000485938 AIPL1Q9NZN9 384 aa24.77■■□□□ 1.56
CLN5-202ENST00000485938 PCDHA2Q9Y5H9 948 aa24.77■■□□□ 1.56
CLN5-202ENST00000485938 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.77■■□□□ 1.56
CLN5-202ENST00000485938 PLCG2P16885 1265 aa24.76■■□□□ 1.55
CLN5-202ENST00000485938 RAPGEF1Q13905 1077 aa24.76■■□□□ 1.55
CLN5-202ENST00000485938 KIAA0753Q2KHM9 967 aa24.76■■□□□ 1.55
CLN5-202ENST00000485938 RC3H1Q5TC82 1133 aaKnown RBP24.76■■□□□ 1.55
CLN5-202ENST00000485938 KDM7AQ6ZMT4 941 aa24.76■■□□□ 1.55
CLN5-202ENST00000485938 PACSIN1Q9BY11 444 aa24.76■■□□□ 1.55
CLN5-202ENST00000485938 MTMR4Q9NYA4 1195 aa24.76■■□□□ 1.55
CLN5-202ENST00000485938 TBC1D7Q9P0N9 293 aa24.76■■□□□ 1.55
CLN5-202ENST00000485938 DDX25Q9UHL0 483 aaKnown RBP24.76■■□□□ 1.55
CLN5-202ENST00000485938 PACSIN2Q9UNF0 486 aaPredicted RBP24.76■■□□□ 1.55
CLN5-202ENST00000485938 ATAD5Q96QE3 1844 aa24.76■■□□□ 1.55
CLN5-202ENST00000485938 CDC37Q16543 378 aaPredicted RBP24.75■■□□□ 1.55
CLN5-202ENST00000485938 UBE2SQ16763 222 aa24.75■■□□□ 1.55
CLN5-202ENST00000485938 HYIQ5T013 277 aa24.75■■□□□ 1.55
CLN5-202ENST00000485938 EMC10Q5UCC4 262 aa24.75■■□□□ 1.55
CLN5-202ENST00000485938 GJA10Q969M2 543 aa24.75■■□□□ 1.55
CLN5-202ENST00000485938 NGLY1Q96IV0 654 aa24.75■■□□□ 1.55
CLN5-202ENST00000485938 KANSL2Q9H9L4 492 aa24.75■■□□□ 1.55
CLN5-202ENST00000485938 PLIN4Q96Q06 1357 aa24.75■■□□□ 1.55
CLN5-202ENST00000485938 SNHG28P0DPA3 235 aa24.75■■□□□ 1.55
CLN5-202ENST00000485938 LIG3P49916 1009 aa24.75■■□□□ 1.55
CLN5-202ENST00000485938 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.75■■□□□ 1.55
CLN5-202ENST00000485938 SAMM50Q9Y512 469 aa24.75■■□□□ 1.55
CLN5-202ENST00000485938 ERLIN2O94905 339 aa24.74■■□□□ 1.55
CLN5-202ENST00000485938 CLK2P49760 499 aaKnown RBP24.74■■□□□ 1.55
CLN5-202ENST00000485938 ATP1A2P50993 1020 aa24.74■■□□□ 1.55
CLN5-202ENST00000485938 GUCY2FP51841 1108 aa24.74■■□□□ 1.55
CLN5-202ENST00000485938 ARID5AQ03989 594 aa24.74■■□□□ 1.55
CLN5-202ENST00000485938 KLHL30Q0D2K2 578 aa24.74■■□□□ 1.55
CLN5-202ENST00000485938 PPP1R18Q6NYC8 613 aa24.74■■□□□ 1.55
CLN5-202ENST00000485938 NELFCDQ8IXH7 590 aa24.74■■□□□ 1.55
CLN5-202ENST00000485938 LRRC47Q8N1G4 583 aaKnown RBP24.74■■□□□ 1.55
CLN5-202ENST00000485938 WHAMMQ8TF30 809 aa24.74■■□□□ 1.55
CLN5-202ENST00000485938 GANQ9H2C0 597 aa24.74■■□□□ 1.55
CLN5-202ENST00000485938 BMP2KQ9NSY1 1161 aaPredicted RBP24.74■■□□□ 1.55
CLN5-202ENST00000485938 ADAMTS1Q9UHI8 967 aa24.74■■□□□ 1.55
CLN5-202ENST00000485938 GNPATO15228 680 aa24.74■■□□□ 1.55
CLN5-202ENST00000485938 SSBP05455 408 aaKnown RBP eCLIP24.74■■□□□ 1.55
CLN5-202ENST00000485938 FAM133AQ8N9E0 248 aa24.74■■□□□ 1.55
CLN5-202ENST00000485938 USP38Q8NB14 1042 aa24.74■■□□□ 1.55
CLN5-202ENST00000485938 KCTD10Q9H3F6 313 aa24.74■■□□□ 1.55
CLN5-202ENST00000485938 NDUFAB1O14561 156 aa24.73■■□□□ 1.55
CLN5-202ENST00000485938 PPP1R11O60927 126 aaPredicted RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms