RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 RETREG2Q8NC44 543 aa14.27□□□□□ -0.13
PTCD1-205ENST00000485746 SDF4Q9BRK5 362 aa14.27□□□□□ -0.13
PTCD1-205ENST00000485746 C22orf23Q9BZE7 217 aa14.27□□□□□ -0.13
PTCD1-205ENST00000485746 BCAS3Q9H6U6 928 aa14.27□□□□□ -0.13
PTCD1-205ENST00000485746 ATP9AO75110 1047 aa14.26□□□□□ -0.13
PTCD1-205ENST00000485746 CCL23P55773 120 aa14.26□□□□□ -0.13
PTCD1-205ENST00000485746 CEP55Q53EZ4 464 aa14.26□□□□□ -0.13
PTCD1-205ENST00000485746 PLA2G4DQ86XP0 818 aa14.26□□□□□ -0.13
PTCD1-205ENST00000485746 CCDC155Q8N6L0 562 aa14.26□□□□□ -0.13
PTCD1-205ENST00000485746 NECAB1Q8N987 351 aa14.26□□□□□ -0.13
PTCD1-205ENST00000485746 RASGRP4Q8TDF6 673 aa14.26□□□□□ -0.13
PTCD1-205ENST00000485746 WASF1Q92558 559 aa14.26□□□□□ -0.13
PTCD1-205ENST00000485746 KAT2BQ92831 832 aa14.26□□□□□ -0.13
PTCD1-205ENST00000485746 ORC3Q9UBD5 711 aaPredicted RBP14.26□□□□□ -0.13
PTCD1-205ENST00000485746 HDAC6Q9UBN7 1215 aa14.26□□□□□ -0.13
PTCD1-205ENST00000485746 ZNF215Q9UL58 517 aaPredicted RBP14.26□□□□□ -0.13
PTCD1-205ENST00000485746 H3BRB1 525 aa14.25□□□□□ -0.13
PTCD1-205ENST00000485746 F2P00734 622 aa14.25□□□□□ -0.13
PTCD1-205ENST00000485746 LGALS2P05162 132 aa14.25□□□□□ -0.13
PTCD1-205ENST00000485746 CSF2RAP15509 400 aa14.25□□□□□ -0.13
PTCD1-205ENST00000485746 FXR1P51114 621 aaKnown RBP eCLIP14.25□□□□□ -0.13
PTCD1-205ENST00000485746 BFSP2Q13515 415 aa14.25□□□□□ -0.13
PTCD1-205ENST00000485746 SHHQ15465 462 aa14.25□□□□□ -0.13
PTCD1-205ENST00000485746 ME3Q16798 604 aa14.25□□□□□ -0.13
PTCD1-205ENST00000485746 GDF6Q6KF10 455 aaPredicted RBP14.25□□□□□ -0.13
PTCD1-205ENST00000485746 CYP2W1Q8TAV3 490 aa14.25□□□□□ -0.13
PTCD1-205ENST00000485746 SEPT1Q8WYJ6 367 aa14.25□□□□□ -0.13
PTCD1-205ENST00000485746 IL17RAQ96F46 866 aa14.25□□□□□ -0.13
PTCD1-205ENST00000485746 RNPC3Q96LT9 517 aaKnown RBP14.25□□□□□ -0.13
PTCD1-205ENST00000485746 GPR20Q99678 358 aa14.25□□□□□ -0.13
PTCD1-205ENST00000485746 NOC4LQ9BVI4 516 aaKnown RBP14.25□□□□□ -0.13
PTCD1-205ENST00000485746 TUT1Q9H6E5 874 aaKnown RBP14.25□□□□□ -0.13
PTCD1-205ENST00000485746 KCNH7Q9NS40 1196 aa14.25□□□□□ -0.13
PTCD1-205ENST00000485746 TCEAL9Q9UHQ7 104 aa14.25□□□□□ -0.13
PTCD1-205ENST00000485746 PCDHA4Q9UN74 947 aa14.25□□□□□ -0.13
PTCD1-205ENST00000485746 ARP10275 920 aa14.24□□□□□ -0.13
PTCD1-205ENST00000485746 ACRP10323 421 aa14.24□□□□□ -0.13
PTCD1-205ENST00000485746 KCNA2P16389 499 aa14.24□□□□□ -0.13
PTCD1-205ENST00000485746 TCF7P36402 384 aaPredicted RBP14.24□□□□□ -0.13
PTCD1-205ENST00000485746 GALNT17Q6IS24 598 aa14.24□□□□□ -0.13
PTCD1-205ENST00000485746 SESTD1Q86VW0 696 aa14.24□□□□□ -0.13
PTCD1-205ENST00000485746 RPUSD2Q8IZ73 545 aaKnown RBP14.24□□□□□ -0.13
PTCD1-205ENST00000485746 BLIDQ8IZY5 108 aa14.24□□□□□ -0.13
PTCD1-205ENST00000485746 GLG1Q92896 1179 aa14.24□□□□□ -0.13
PTCD1-205ENST00000485746 AIFM3Q96NN9 605 aa14.24□□□□□ -0.13
PTCD1-205ENST00000485746 AGO4Q9HCK5 861 aaKnown RBP14.24□□□□□ -0.13
PTCD1-205ENST00000485746 JPH1Q9HDC5 661 aaPredicted RBP14.24□□□□□ -0.13
PTCD1-205ENST00000485746 SLC9A2Q9UBY0 812 aa14.24□□□□□ -0.13
PTCD1-205ENST00000485746 GTF2IRD1Q9UHL9 959 aa14.24□□□□□ -0.13
PTCD1-205ENST00000485746 LIMCH1Q9UPQ0 1083 aa14.24□□□□□ -0.13
PTCD1-205ENST00000485746 UMODL1Q5DID0 1318 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 C17orf102A2RUQ5 167 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 DDX39AO00148 427 aaKnown RBP14.23□□□□□ -0.13
PTCD1-205ENST00000485746 HAS3O00219 553 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 MEIS1O00470 390 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 ADAMTS3O15072 1205 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 DTNBO60941 627 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 CYP3A4P08684 503 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 GNAT1P11488 350 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 HOXD8P13378 290 aaPredicted RBP14.23□□□□□ -0.13
PTCD1-205ENST00000485746 C9orf50Q5SZB4 431 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 NIPA1Q7RTP0 329 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 GTF3C6Q969F1 213 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 UIMC1Q96RL1 719 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 ZNF577Q9BSK1 485 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 C16orf70Q9BSU1 422 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 AZI2Q9H6S1 392 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 IL23AQ9NPF7 189 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 KCNJ14Q9UNX9 436 aa14.23□□□□□ -0.13
PTCD1-205ENST00000485746 STK36Q9NRP7 1315 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 LARGE1O95461 756 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 FGBP02675 491 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 SMIM10L2AP0DMW4 78 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 SMIM10L2BP0DMW5 78 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 MARK3P27448 753 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 EPHB4P54760 987 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 SETQ01105 290 aaPredicted RBP14.22□□□□□ -0.13
PTCD1-205ENST00000485746 TRIM29Q14134 588 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 LRIT3Q3SXY7 679 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 PRR16Q569H4 304 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 PSRC1Q6PGN9 363 aaPredicted RBP14.22□□□□□ -0.13
PTCD1-205ENST00000485746 TRIM50Q86XT4 487 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 FAM177A1Q8N128 213 aaPredicted RBP14.22□□□□□ -0.13
PTCD1-205ENST00000485746 CAGE1Q8TC20 777 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 ATP6V0A1Q93050 837 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 SCLYQ96I15 445 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 ZSCAN31Q96LW9 406 aaPredicted RBP14.22□□□□□ -0.13
PTCD1-205ENST00000485746 FTOQ9C0B1 505 aaKnown RBP eCLIP14.22□□□□□ -0.13
PTCD1-205ENST00000485746 MTIF3Q9H2K0 278 aaKnown RBP14.22□□□□□ -0.13
PTCD1-205ENST00000485746 SMARCAD1Q9H4L7 1026 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 BRMS1Q9HCU9 246 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 TELO2Q9Y4R8 837 aa14.22□□□□□ -0.13
PTCD1-205ENST00000485746 NFASCO94856 1347 aa14.21□□□□□ -0.13
PTCD1-205ENST00000485746 CCDC194A0A1B0GVG4 234 aa14.21□□□□□ -0.13
PTCD1-205ENST00000485746 GSTTP1A0A1W2PQM5 241 aa14.21□□□□□ -0.13
PTCD1-205ENST00000485746 FAM86B1E9PN63 330 aa14.21□□□□□ -0.13
PTCD1-205ENST00000485746 SOX1O00570 391 aaPredicted RBP14.21□□□□□ -0.13
PTCD1-205ENST00000485746 FAM86B2P0C5J1 330 aa14.21□□□□□ -0.13
PTCD1-205ENST00000485746 USP11P51784 963 aa14.21□□□□□ -0.13
PTCD1-205ENST00000485746 FOSBP53539 338 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms