RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 FOXD4L6Q3SYB3 417 aaPredicted RBP13.49□□□□□ -0.25
APTX-227ENST00000485479 XRRA1Q6P2D8 792 aa13.49□□□□□ -0.25
APTX-227ENST00000485479 FOXD4L3Q6VB84 417 aaPredicted RBP13.49□□□□□ -0.25
APTX-227ENST00000485479 NOSTRINQ8IVI9 506 aa13.49□□□□□ -0.25
APTX-227ENST00000485479 ZNF577Q9BSK1 485 aa13.49□□□□□ -0.25
APTX-227ENST00000485479 UPF3AQ9H1J1 476 aaKnown RBP13.49□□□□□ -0.25
APTX-227ENST00000485479 SPC25Q9HBM1 224 aa13.49□□□□□ -0.25
APTX-227ENST00000485479 A0A1W2PQ45 241 aaPredicted RBP13.48□□□□□ -0.25
APTX-227ENST00000485479 A0A1W2PQY0 241 aa13.48□□□□□ -0.25
APTX-227ENST00000485479 IPO5O00410 1097 aaKnown RBP13.48□□□□□ -0.25
APTX-227ENST00000485479 CHMP2AO43633 222 aa13.48□□□□□ -0.25
APTX-227ENST00000485479 ACLYP53396 1101 aa13.48□□□□□ -0.25
APTX-227ENST00000485479 TRMT1LQ7Z2T5 733 aaKnown RBP13.48□□□□□ -0.25
APTX-227ENST00000485479 ARRDC4Q8NCT1 418 aa13.48□□□□□ -0.25
APTX-227ENST00000485479 VTI1AQ96AJ9 217 aa13.48□□□□□ -0.25
APTX-227ENST00000485479 FOXP1Q9H334 677 aaPredicted RBP13.48□□□□□ -0.25
APTX-227ENST00000485479 RANBP2P49792 3224 aaKnown RBP13.47□□□□□ -0.25
APTX-227ENST00000485479 NOP56O00567 594 aaKnown RBP13.47□□□□□ -0.25
APTX-227ENST00000485479 CIITAP33076 1130 aa13.47□□□□□ -0.25
APTX-227ENST00000485479 USP11P51784 963 aa13.47□□□□□ -0.25
APTX-227ENST00000485479 ZNF174Q15697 407 aa13.47□□□□□ -0.25
APTX-227ENST00000485479 UBE2Q1Q7Z7E8 422 aa13.47□□□□□ -0.25
APTX-227ENST00000485479 FAM177A1Q8N128 213 aaPredicted RBP13.47□□□□□ -0.25
APTX-227ENST00000485479 C11orf49Q9H6J7 331 aa13.47□□□□□ -0.25
APTX-227ENST00000485479 ALPK3Q96L96 1907 aa13.47□□□□□ -0.25
APTX-227ENST00000485479 NKRFO15226 690 aaKnown RBP eCLIP13.47□□□□□ -0.25
APTX-227ENST00000485479 CCNE2O96020 404 aa13.47□□□□□ -0.25
APTX-227ENST00000485479 TGFB3P10600 412 aa13.47□□□□□ -0.25
APTX-227ENST00000485479 U2AF2P26368 475 aaKnown RBP eCLIP13.47□□□□□ -0.259e-15■■■■■ 42.9
APTX-227ENST00000485479 TOB1P50616 345 aaPredicted RBP13.47□□□□□ -0.25
APTX-227ENST00000485479 UTP14CQ5TAP6 766 aaKnown RBP13.47□□□□□ -0.25
APTX-227ENST00000485479 MCTP2Q6DN12 878 aa13.47□□□□□ -0.25
APTX-227ENST00000485479 METTL7BQ6UX53 244 aa13.47□□□□□ -0.25
APTX-227ENST00000485479 FTOQ9C0B1 505 aaKnown RBP eCLIP13.47□□□□□ -0.25
APTX-227ENST00000485479 TMEM60Q9H2L4 133 aa13.47□□□□□ -0.25
APTX-227ENST00000485479 JPH1Q9HDC5 661 aaPredicted RBP13.47□□□□□ -0.25
APTX-227ENST00000485479 PCDHB6Q9Y5E3 794 aa13.47□□□□□ -0.25
APTX-227ENST00000485479 A6NJR5 290 aa13.46□□□□□ -0.25
APTX-227ENST00000485479 DHX15O43143 795 aaKnown RBP13.46□□□□□ -0.25
APTX-227ENST00000485479 CPT1AP50416 773 aa13.46□□□□□ -0.25
APTX-227ENST00000485479 PURAQ00577 322 aaKnown RBP13.46□□□□□ -0.25
APTX-227ENST00000485479 SETQ01105 290 aaPredicted RBP13.46□□□□□ -0.25
APTX-227ENST00000485479 NEDD9Q14511 834 aa13.46□□□□□ -0.25
APTX-227ENST00000485479 LRRC26Q2I0M4 334 aa13.46□□□□□ -0.25
APTX-227ENST00000485479 KCNV1Q6PIU1 500 aa13.46□□□□□ -0.25
APTX-227ENST00000485479 NECAB2Q7Z6G3 386 aa13.46□□□□□ -0.25
APTX-227ENST00000485479 TEX2Q8IWB9 1127 aa13.46□□□□□ -0.25
APTX-227ENST00000485479 PPTC7Q8NI37 304 aa13.46□□□□□ -0.25
APTX-227ENST00000485479 GPR20Q99678 358 aa13.46□□□□□ -0.25
APTX-227ENST00000485479 MTMR6Q9Y217 621 aa13.46□□□□□ -0.25
APTX-227ENST00000485479 LAMA3Q16787 3333 aa13.46□□□□□ -0.25
APTX-227ENST00000485479 STX6O43752 255 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 COL6A1P12109 1028 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 MARK3P27448 753 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 CST5P28325 142 aaPredicted RBP13.45□□□□□ -0.26
APTX-227ENST00000485479 TCF7P36402 384 aaPredicted RBP13.45□□□□□ -0.26
APTX-227ENST00000485479 LAMC2Q13753 1193 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 ETNPPLQ8TBG4 499 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 HAS1Q92839 578 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 CHAMP1Q96JM3 812 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 CDHR1Q96JP9 859 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 SENP7Q9BQF6 1050 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 SDF4Q9BRK5 362 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 STARD7Q9NQZ5 370 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 SLC9A2Q9UBY0 812 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 Q9Y3F1 56 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 Q4G0T1 1027 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 TTC38Q5R3I4 469 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 LRCH2Q5VUJ6 765 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 PCSK9Q8NBP7 692 aaKnown RBP13.45□□□□□ -0.26
APTX-227ENST00000485479 PHF24Q9UPV7 400 aa13.45□□□□□ -0.26
APTX-227ENST00000485479 GRIN2DO15399 1336 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 CYP3A7-CYP3A51PA0A087WV96 503 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 GSTTP1A0A1W2PQM5 241 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 NEMFO60524 1076 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 GAS7O60861 476 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 LGALS2P05162 132 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 CYP3A7P24462 503 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 ACTR2P61160 394 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 DGKDQ16760 1214 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 TRIM60Q495X7 471 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 NIPA1Q7RTP0 329 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 ANKLE1Q8NAG6 615 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 KAT2BQ92831 832 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 EMID1Q96A84 441 aaPredicted RBP13.44□□□□□ -0.26
APTX-227ENST00000485479 GLT1D1Q96MS3 346 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 MBOAT7Q96N66 472 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 UNC45AQ9H3U1 944 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 TSHZ2Q9NRE2 1034 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 DAXXQ9UER7 740 aaPredicted RBP13.44□□□□□ -0.26
APTX-227ENST00000485479 SAMM50Q9Y512 469 aa13.44□□□□□ -0.26
APTX-227ENST00000485479 MARCH6O60337 910 aa13.43□□□□□ -0.26
APTX-227ENST00000485479 PQBP1O60828 265 aaKnown RBP13.43□□□□□ -0.26
APTX-227ENST00000485479 PDCP20941 246 aa13.43□□□□□ -0.26
APTX-227ENST00000485479 CEBPZQ03701 1054 aaKnown RBP13.43□□□□□ -0.26
APTX-227ENST00000485479 BECN1Q14457 450 aa13.43□□□□□ -0.26
APTX-227ENST00000485479 CALCRLQ16602 461 aa13.43□□□□□ -0.26
APTX-227ENST00000485479 FAM47CQ5HY64 1035 aa13.43□□□□□ -0.26
APTX-227ENST00000485479 PPP4R3AQ6IN85 833 aa13.43□□□□□ -0.26
APTX-227ENST00000485479 SLC5A5Q92911 643 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms