RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 JMJD4Q9H9V9 463 aa17.81■□□□□ 0.44
HLA-DQB1-208ENST00000484729 PRKAG3Q9UGI9 489 aa17.81■□□□□ 0.44
HLA-DQB1-208ENST00000484729 FAM50BQ9Y247 325 aa17.81■□□□□ 0.44
HLA-DQB1-208ENST00000484729 MRPL11Q9Y3B7 192 aaKnown RBP17.81■□□□□ 0.44
HLA-DQB1-208ENST00000484729 MYO7AQ13402 2215 aa17.81■□□□□ 0.44
HLA-DQB1-208ENST00000484729 NR3C2P08235 984 aa17.8■□□□□ 0.44
HLA-DQB1-208ENST00000484729 GSPT1P15170 499 aaKnown RBP17.8■□□□□ 0.44
HLA-DQB1-208ENST00000484729 PDE4AP27815 886 aa17.8■□□□□ 0.44
HLA-DQB1-208ENST00000484729 LTBRP36941 435 aa17.8■□□□□ 0.44
HLA-DQB1-208ENST00000484729 COL19A1Q14993 1142 aa17.8■□□□□ 0.44
HLA-DQB1-208ENST00000484729 RPAINQ86UA6 219 aa17.8■□□□□ 0.44
HLA-DQB1-208ENST00000484729 TOP1MTQ969P6 601 aa17.8■□□□□ 0.44
HLA-DQB1-208ENST00000484729 KCNH6Q9H252 994 aa17.8■□□□□ 0.44
HLA-DQB1-208ENST00000484729 MUTYHQ9UIF7 546 aa17.8■□□□□ 0.44
HLA-DQB1-208ENST00000484729 SUPT16HQ9Y5B9 1047 aaKnown RBP17.8■□□□□ 0.44
HLA-DQB1-208ENST00000484729 ZNF318Q5VUA4 2279 aa17.79■□□□□ 0.44
HLA-DQB1-208ENST00000484729 MYH7BA7E2Y1 1941 aa17.79■□□□□ 0.44
HLA-DQB1-208ENST00000484729 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.79■□□□□ 0.44
HLA-DQB1-208ENST00000484729 CTSHP09668 335 aa17.79■□□□□ 0.44
HLA-DQB1-208ENST00000484729 DLX2Q07687 328 aaPredicted RBP17.79■□□□□ 0.44
HLA-DQB1-208ENST00000484729 TRDNQ13061 729 aa17.79■□□□□ 0.44
HLA-DQB1-208ENST00000484729 HSDL1Q3SXM5 330 aa17.79■□□□□ 0.44
HLA-DQB1-208ENST00000484729 STAG2Q8N3U4 1231 aa17.79■□□□□ 0.44
HLA-DQB1-208ENST00000484729 MAF1Q9H063 256 aa17.79■□□□□ 0.44
HLA-DQB1-208ENST00000484729 PXMP2Q9NR77 195 aa17.79■□□□□ 0.44
HLA-DQB1-208ENST00000484729 PPFIA4O75335 1185 aa17.78■□□□□ 0.44
HLA-DQB1-208ENST00000484729 RGS20O76081 388 aa17.78■□□□□ 0.44
HLA-DQB1-208ENST00000484729 CFBP00751 764 aa17.78■□□□□ 0.44
HLA-DQB1-208ENST00000484729 MYCLP12524 364 aaPredicted RBP17.78■□□□□ 0.44
HLA-DQB1-208ENST00000484729 HOXD8P13378 290 aaPredicted RBP17.78■□□□□ 0.44
HLA-DQB1-208ENST00000484729 MYSM1Q5VVJ2 828 aa17.78■□□□□ 0.44
HLA-DQB1-208ENST00000484729 CYB5R4Q7L1T6 521 aa17.78■□□□□ 0.44
HLA-DQB1-208ENST00000484729 SEPT8Q92599 483 aa17.78■□□□□ 0.44
HLA-DQB1-208ENST00000484729 ATP6V0A1Q93050 837 aa17.78■□□□□ 0.44
HLA-DQB1-208ENST00000484729 ZFP91Q96JP5 570 aaPredicted RBP17.78■□□□□ 0.44
HLA-DQB1-208ENST00000484729 SNX27Q96L92 541 aa17.78■□□□□ 0.44
HLA-DQB1-208ENST00000484729 SPATA33Q96N06 139 aa17.78■□□□□ 0.44
HLA-DQB1-208ENST00000484729 IFIH1Q9BYX4 1025 aaKnown RBP17.78■□□□□ 0.44
HLA-DQB1-208ENST00000484729 UPF3BQ9BZI7 483 aaKnown RBP17.78■□□□□ 0.44
HLA-DQB1-208ENST00000484729 C17orf102A2RUQ5 167 aa17.77■□□□□ 0.44
HLA-DQB1-208ENST00000484729 TREHO43280 583 aa17.77■□□□□ 0.44
HLA-DQB1-208ENST00000484729 CSPG5O95196 566 aa17.77■□□□□ 0.44
HLA-DQB1-208ENST00000484729 GGPS1O95749 300 aa17.77■□□□□ 0.44
HLA-DQB1-208ENST00000484729 SP2Q02086 613 aa17.77■□□□□ 0.44
HLA-DQB1-208ENST00000484729 SEC23AQ15436 765 aa17.77■□□□□ 0.44
HLA-DQB1-208ENST00000484729 CELF3Q5SZQ8 465 aaKnown RBP17.77■□□□□ 0.44
HLA-DQB1-208ENST00000484729 RUFY2Q8WXA3 655 aa17.77■□□□□ 0.44
HLA-DQB1-208ENST00000484729 MFSD14AQ96MC6 490 aa17.77■□□□□ 0.44
HLA-DQB1-208ENST00000484729 C16orf70Q9BSU1 422 aa17.77■□□□□ 0.44
HLA-DQB1-208ENST00000484729 AMNQ9BXJ7 453 aa17.77■□□□□ 0.44
HLA-DQB1-208ENST00000484729 NLRC5Q86WI3 1866 aa17.76■□□□□ 0.43
HLA-DQB1-208ENST00000484729 KLRF2D3W0D1 207 aa17.76■□□□□ 0.43
HLA-DQB1-208ENST00000484729 CTNNB1P35222 781 aa17.76■□□□□ 0.43
HLA-DQB1-208ENST00000484729 GTF2F1P35269 517 aaKnown RBP eCLIP17.76■□□□□ 0.43
HLA-DQB1-208ENST00000484729 HYAL1Q12794 435 aa17.76■□□□□ 0.43
HLA-DQB1-208ENST00000484729 SMAD2Q15796 467 aaKnown RBP17.76■□□□□ 0.43
HLA-DQB1-208ENST00000484729 HOMER1Q86YM7 354 aa17.76■□□□□ 0.43
HLA-DQB1-208ENST00000484729 GPKOWQ92917 476 aaPredicted RBP eCLIP17.76■□□□□ 0.43
HLA-DQB1-208ENST00000484729 BCAS3Q9H6U6 928 aa17.76■□□□□ 0.43
HLA-DQB1-208ENST00000484729 OPLAHO14841 1288 aa17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 GRM6O15303 877 aa17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 MBTPS2O43462 519 aa17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 CYP21A2P08686 494 aa17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 SMIM10L2AP0DMW4 78 aa17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 SMIM10L2BP0DMW5 78 aa17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 IRX6P78412 446 aaPredicted RBP17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 CTC1Q2NKJ3 1217 aa17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 RALYLQ86SE5 291 aaKnown RBP17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 RNF135Q8IUD6 432 aa17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 PRSS33Q8NF86 280 aa17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 IL31RAQ8NI17 732 aa17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 PDCD2LQ9BRP1 358 aa17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 RNPEPQ9H4A4 650 aa17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 IGFLR1Q9H665 355 aa17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 MAD2L2Q9UI95 211 aa17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 U3KPZ7 1027 aaPredicted RBP17.75■□□□□ 0.43
HLA-DQB1-208ENST00000484729 ATG2AQ2TAZ0 1938 aa17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 ERICH2A1L162 156 aa17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 H3BRB1 525 aa17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 IFIT3O14879 490 aaKnown RBP17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 ZBTB5O15062 677 aa17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 LINC01565O15544 149 aa17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 PPP1R11O60927 126 aaPredicted RBP17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 UBA1P22314 1058 aaKnown RBP17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 CHMLP26374 656 aa17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 HSD17B4P51659 736 aa17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 PTH1RQ03431 593 aa17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 HERC4Q5GLZ8 1057 aaPredicted RBP17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 IER5LQ5T953 404 aa17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 FIBCD1Q8N539 461 aa17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 IL17RAQ96F46 866 aa17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 TUT1Q9H6E5 874 aaKnown RBP17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 PCDHA1Q9Y5I3 950 aa17.74■□□□□ 0.43
HLA-DQB1-208ENST00000484729 TECTAO75443 2155 aa17.73■□□□□ 0.43
HLA-DQB1-208ENST00000484729 PALM3A6NDB9 673 aaPredicted RBP17.73■□□□□ 0.43
HLA-DQB1-208ENST00000484729 NCK2O43639 380 aa17.73■□□□□ 0.43
HLA-DQB1-208ENST00000484729 TBX10O75333 385 aa17.73■□□□□ 0.43
HLA-DQB1-208ENST00000484729 LINC00271P0C7V0 271 aa17.73■□□□□ 0.43
HLA-DQB1-208ENST00000484729 HOXA13P31271 388 aaPredicted RBP17.73■□□□□ 0.43
HLA-DQB1-208ENST00000484729 HOXC8P31273 242 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms