RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 SLC7A14Q8TBB6 771 aa9.48□□□□□ -0.89
UBR3-210ENST00000484596 RTEL1Q9NZ71 1219 aa9.48□□□□□ -0.89
UBR3-210ENST00000484596 MAGEC2Q9UBF1 373 aaPredicted RBP9.48□□□□□ -0.89
UBR3-210ENST00000484596 TRAF6Q9Y4K3 522 aa9.48□□□□□ -0.89
UBR3-210ENST00000484596 LCP1P13796 627 aa9.47□□□□□ -0.89
UBR3-210ENST00000484596 GUCY1A3Q02108 690 aa9.47□□□□□ -0.89
UBR3-210ENST00000484596 NFIXQ14938 502 aa9.47□□□□□ -0.89
UBR3-210ENST00000484596 RNF187Q5TA31 235 aaPredicted RBP9.47□□□□□ -0.89
UBR3-210ENST00000484596 CPA5Q8WXQ8 436 aa9.47□□□□□ -0.89
UBR3-210ENST00000484596 MFSD3Q96ES6 412 aa9.47□□□□□ -0.89
UBR3-210ENST00000484596 CHAMP1Q96JM3 812 aa9.47□□□□□ -0.89
UBR3-210ENST00000484596 CLUHP3Q96NS8 147 aa9.47□□□□□ -0.89
UBR3-210ENST00000484596 TRIM39Q9HCM9 518 aa9.47□□□□□ -0.89
UBR3-210ENST00000484596 ASXL2Q76L83 1435 aa9.47□□□□□ -0.89
UBR3-210ENST00000484596 A0A1B0GTL3 188 aa9.46□□□□□ -0.9
UBR3-210ENST00000484596 B4E1Z4 1266 aa9.46□□□□□ -0.9
UBR3-210ENST00000484596 C22orf46C9J442 243 aa9.46□□□□□ -0.9
UBR3-210ENST00000484596 H7BY64 318 aa9.46□□□□□ -0.9
UBR3-210ENST00000484596 FOXD2O60548 495 aaPredicted RBP9.46□□□□□ -0.9
UBR3-210ENST00000484596 SLURP1P55000 103 aa9.46□□□□□ -0.9
UBR3-210ENST00000484596 BRAPQ7Z569 592 aa9.46□□□□□ -0.9
UBR3-210ENST00000484596 SAPCD2Q86UD0 394 aa9.46□□□□□ -0.9
UBR3-210ENST00000484596 SMARCC2Q8TAQ2 1214 aa9.46□□□□□ -0.9
UBR3-210ENST00000484596 ZNF526Q8TF50 670 aaPredicted RBP9.46□□□□□ -0.9
UBR3-210ENST00000484596 TMEM169Q96HH4 297 aa9.46□□□□□ -0.9
UBR3-210ENST00000484596 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.46□□□□□ -0.9
UBR3-210ENST00000484596 CRTAMO95727 393 aa9.45□□□□□ -0.9
UBR3-210ENST00000484596 ASLP04424 464 aa9.45□□□□□ -0.9
UBR3-210ENST00000484596 FLT3P36888 993 aa9.45□□□□□ -0.9
UBR3-210ENST00000484596 CACNB2Q08289 660 aaPredicted RBP9.45□□□□□ -0.9
UBR3-210ENST00000484596 PAK1Q13153 545 aa9.45□□□□□ -0.9
UBR3-210ENST00000484596 NOX5Q96PH1 765 aa9.45□□□□□ -0.9
UBR3-210ENST00000484596 MSCO60682 206 aa9.44□□□□□ -0.9
UBR3-210ENST00000484596 FPR2P25090 351 aa9.44□□□□□ -0.9
UBR3-210ENST00000484596 BCL6P41182 706 aa9.44□□□□□ -0.9
UBR3-210ENST00000484596 BUD31P41223 144 aaPredicted RBP9.44□□□□□ -0.9
UBR3-210ENST00000484596 KCNC1P48547 511 aa9.44□□□□□ -0.9
UBR3-210ENST00000484596 DLX2Q07687 328 aaPredicted RBP9.44□□□□□ -0.9
UBR3-210ENST00000484596 LIPIQ6XZB0 460 aa9.44□□□□□ -0.9
UBR3-210ENST00000484596 CEP68Q76N32 757 aa9.44□□□□□ -0.9
UBR3-210ENST00000484596 DCP2Q8IU60 420 aaKnown RBP9.44□□□□□ -0.9
UBR3-210ENST00000484596 TRMT2BQ96GJ1 504 aaKnown RBP9.44□□□□□ -0.9
UBR3-210ENST00000484596 PCDHA9Q9Y5H5 950 aa9.44□□□□□ -0.9
UBR3-210ENST00000484596 PCDHA8Q9Y5H6 950 aa9.44□□□□□ -0.9
UBR3-210ENST00000484596 FAM47E-STBD1D6RA91 191 aa9.43□□□□□ -0.9
UBR3-210ENST00000484596 ARVCFO00192 962 aa9.43□□□□□ -0.9
UBR3-210ENST00000484596 GSTA4O15217 222 aa9.43□□□□□ -0.9
UBR3-210ENST00000484596 SGSM2O43147 1006 aa9.43□□□□□ -0.9
UBR3-210ENST00000484596 NPTXRO95502 500 aa9.43□□□□□ -0.9
UBR3-210ENST00000484596 NCLP19338 710 aaKnown RBP9.43□□□□□ -0.9
UBR3-210ENST00000484596 IGFALSP35858 605 aa9.43□□□□□ -0.9
UBR3-210ENST00000484596 C21orf62-AS1Q17RA5 79 aa9.43□□□□□ -0.9
UBR3-210ENST00000484596 TM4SF20Q53R12 229 aa9.43□□□□□ -0.9
UBR3-210ENST00000484596 Q8N1Y9 231 aa9.43□□□□□ -0.9
UBR3-210ENST00000484596 CLDND1Q9NY35 253 aa9.43□□□□□ -0.9
UBR3-210ENST00000484596 COA3Q9Y2R0 106 aaPredicted RBP9.43□□□□□ -0.9
UBR3-210ENST00000484596 SH3D21A4FU49 640 aa9.42□□□□□ -0.9
UBR3-210ENST00000484596 OPA1O60313 960 aa9.42□□□□□ -0.9
UBR3-210ENST00000484596 SOD2P04179 222 aa9.42□□□□□ -0.9
UBR3-210ENST00000484596 GRK2P25098 689 aa9.42□□□□□ -0.9
UBR3-210ENST00000484596 GRK3P35626 688 aa9.42□□□□□ -0.9
UBR3-210ENST00000484596 MROH9Q5TGP6 573 aa9.42□□□□□ -0.9
UBR3-210ENST00000484596 ZC3H7AQ8IWR0 971 aaKnown RBP9.42□□□□□ -0.9
UBR3-210ENST00000484596 DHX37Q8IY37 1157 aaKnown RBP9.42□□□□□ -0.9
UBR3-210ENST00000484596 DDX11Q96FC9 970 aa9.42□□□□□ -0.9
UBR3-210ENST00000484596 SCLYQ96I15 445 aa9.42□□□□□ -0.9
UBR3-210ENST00000484596 AP5M1Q9H0R1 490 aa9.42□□□□□ -0.9
UBR3-210ENST00000484596 ADAM7Q9H2U9 754 aa9.42□□□□□ -0.9
UBR3-210ENST00000484596 SPC25Q9HBM1 224 aa9.42□□□□□ -0.9
UBR3-210ENST00000484596 X6R8D5 127 aa9.42□□□□□ -0.9
UBR3-210ENST00000484596 TCRBV16S1A1N1A0A5B0 115 aa9.41□□□□□ -0.9
UBR3-210ENST00000484596 ANKRD62A6NC57 917 aa9.41□□□□□ -0.9
UBR3-210ENST00000484596 WNT9AO14904 365 aa9.41□□□□□ -0.9
UBR3-210ENST00000484596 DNAJC8O75937 253 aaPredicted RBP9.41□□□□□ -0.9
UBR3-210ENST00000484596 FAM47CQ5HY64 1035 aa9.41□□□□□ -0.9
UBR3-210ENST00000484596 ZNF662Q6ZS27 426 aa9.41□□□□□ -0.9
UBR3-210ENST00000484596 UBE2R2Q712K3 238 aaPredicted RBP9.41□□□□□ -0.9
UBR3-210ENST00000484596 FGD2Q7Z6J4 655 aa9.41□□□□□ -0.9
UBR3-210ENST00000484596 NLRP10Q86W26 655 aa9.41□□□□□ -0.9
UBR3-210ENST00000484596 RIOX2Q8IUF8 465 aa9.41□□□□□ -0.9
UBR3-210ENST00000484596 AHI1Q8N157 1196 aa9.41□□□□□ -0.9
UBR3-210ENST00000484596 CXorf38Q8TB03 319 aa9.41□□□□□ -0.9
UBR3-210ENST00000484596 SEC14L1Q92503 715 aa9.41□□□□□ -0.9
UBR3-210ENST00000484596 SPATA25Q9BR10 227 aa9.41□□□□□ -0.9
UBR3-210ENST00000484596 RASGRP1O95267 797 aa9.4□□□□□ -0.9
UBR3-210ENST00000484596 C8BP07358 591 aa9.4□□□□□ -0.9
UBR3-210ENST00000484596 SDSP20132 328 aa9.4□□□□□ -0.9
UBR3-210ENST00000484596 MASP1P48740 699 aa9.4□□□□□ -0.9
UBR3-210ENST00000484596 FRMD5Q7Z6J6 570 aa9.4□□□□□ -0.9
UBR3-210ENST00000484596 DDX53Q86TM3 631 aaKnown RBP9.4□□□□□ -0.9
UBR3-210ENST00000484596 LRRTM3Q86VH5 581 aa9.4□□□□□ -0.9
UBR3-210ENST00000484596 FBXW5Q969U6 566 aa9.4□□□□□ -0.9
UBR3-210ENST00000484596 SPATA6Q9NWH7 488 aaPredicted RBP9.4□□□□□ -0.9
UBR3-210ENST00000484596 FBXL7Q9UJT9 491 aa9.4□□□□□ -0.9
UBR3-210ENST00000484596 DNAJC6O75061 913 aa9.39□□□□□ -0.91
UBR3-210ENST00000484596 DGKIO75912 1065 aa9.39□□□□□ -0.91
UBR3-210ENST00000484596 CYP2C8P10632 490 aa9.39□□□□□ -0.91
UBR3-210ENST00000484596 SYN1P17600 705 aa9.39□□□□□ -0.91
UBR3-210ENST00000484596 SLC6A11P48066 632 aa9.39□□□□□ -0.91
UBR3-210ENST00000484596 CHRNA2Q15822 529 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms