RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 WDR11Q9BZH6 1224 aa10.09□□□□□ -0.79
DDX39B-221ENST00000484566 MTMR4Q9NYA4 1195 aa10.09□□□□□ -0.79
DDX39B-221ENST00000484566 ADD3Q9UEY8 706 aaKnown RBP10.09□□□□□ -0.79
DDX39B-221ENST00000484566 MTUS1Q9ULD2 1270 aa10.09□□□□□ -0.79
DDX39B-221ENST00000484566 DDX49Q9Y6V7 483 aaKnown RBP10.09□□□□□ -0.79
DDX39B-221ENST00000484566 FAM208BQ5VWN6 2430 aa10.09□□□□□ -0.79
DDX39B-221ENST00000484566 PLIN4Q96Q06 1357 aa10.09□□□□□ -0.79
DDX39B-221ENST00000484566 ZNF292O60281 2723 aa10.09□□□□□ -0.79
DDX39B-221ENST00000484566 COL4A6Q14031 1691 aa10.09□□□□□ -0.79
DDX39B-221ENST00000484566 LOC102724159A0A0B4J2E5 919 aa10.08□□□□□ -0.8
DDX39B-221ENST00000484566 LCHNA4D1U4 455 aa10.08□□□□□ -0.8
DDX39B-221ENST00000484566 KPNA6O60684 536 aa10.08□□□□□ -0.8
DDX39B-221ENST00000484566 EIF5BO60841 1220 aaKnown RBP10.08□□□□□ -0.8
DDX39B-221ENST00000484566 CHGBP05060 677 aa10.08□□□□□ -0.8
DDX39B-221ENST00000484566 RLBP1P12271 317 aa10.08□□□□□ -0.8
DDX39B-221ENST00000484566 IL9P15248 144 aa10.08□□□□□ -0.8
DDX39B-221ENST00000484566 WDR5P61964 334 aaKnown RBP10.08□□□□□ -0.8
DDX39B-221ENST00000484566 PWP2Q15269 919 aaKnown RBP10.08□□□□□ -0.8
DDX39B-221ENST00000484566 NBPF20Q3BBV1 942 aa10.08□□□□□ -0.8
DDX39B-221ENST00000484566 TMEM63BQ5T3F8 832 aa10.08□□□□□ -0.8
DDX39B-221ENST00000484566 PTCRAQ6ISU1 281 aaPredicted RBP10.08□□□□□ -0.8
DDX39B-221ENST00000484566 SPRED2Q7Z698 418 aa10.08□□□□□ -0.8
DDX39B-221ENST00000484566 CAGE1Q8TC20 777 aa10.08□□□□□ -0.8
DDX39B-221ENST00000484566 GMCL1Q96IK5 515 aa10.08□□□□□ -0.8
DDX39B-221ENST00000484566 STRBPQ96SI9 672 aaKnown RBP10.08□□□□□ -0.8
DDX39B-221ENST00000484566 MPHOSPH6Q99547 160 aaKnown RBP10.08□□□□□ -0.8
DDX39B-221ENST00000484566 ALG13Q9NP73 1137 aaKnown RBP10.08□□□□□ -0.8
DDX39B-221ENST00000484566 CCPG1Q9ULG6 757 aa10.08□□□□□ -0.8
DDX39B-221ENST00000484566 NKRFO15226 690 aaKnown RBP eCLIP10.07□□□□□ -0.8
DDX39B-221ENST00000484566 EFCAB14O75071 495 aa10.07□□□□□ -0.8
DDX39B-221ENST00000484566 RAB11FIP3O75154 756 aa10.07□□□□□ -0.8
DDX39B-221ENST00000484566 PARNO95453 639 aaKnown RBP10.07□□□□□ -0.8
DDX39B-221ENST00000484566 APPP05067 770 aa10.07□□□□□ -0.8
DDX39B-221ENST00000484566 SLC3A2P08195 630 aaKnown RBP10.07□□□□□ -0.8
DDX39B-221ENST00000484566 GNAT2P19087 354 aa10.07□□□□□ -0.8
DDX39B-221ENST00000484566 ALDH5A1P51649 535 aaPredicted RBP10.07□□□□□ -0.8
DDX39B-221ENST00000484566 CHMP4BP1P59074 171 aa10.07□□□□□ -0.8
DDX39B-221ENST00000484566 PTPRNQ16849 979 aa10.07□□□□□ -0.8
DDX39B-221ENST00000484566 MUM1L1Q5H9M0 696 aa10.07□□□□□ -0.8
DDX39B-221ENST00000484566 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.07□□□□□ -0.8
DDX39B-221ENST00000484566 MORC4Q8TE76 937 aa10.07□□□□□ -0.8
DDX39B-221ENST00000484566 AFAP1L1Q8TED9 768 aa10.07□□□□□ -0.8
DDX39B-221ENST00000484566 SUGCTQ9HAC7 445 aa10.07□□□□□ -0.8
DDX39B-221ENST00000484566 FAM50BQ9Y247 325 aa10.07□□□□□ -0.8
DDX39B-221ENST00000484566 USP24Q9UPU5 2620 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.06□□□□□ -0.8
DDX39B-221ENST00000484566 PTPDC1A2A3K4 754 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 LINC01553A4QN01 128 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 GSG1L2A8MUP6 293 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 PLA2G6O60733 806 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 GJB5O95377 273 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 ICAM1P05362 532 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 MCCP23508 829 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 ERVK-21P61565 698 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 DEFB103AP81534 67 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 PDE4BQ07343 736 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 PTGISQ16647 500 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 QPCTQ16769 361 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 PTPROQ16827 1216 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 TIGD5Q53EQ6 642 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 CNKSR3Q6P9H4 555 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 KCTD1Q719H9 257 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 LRRC8DQ7L1W4 858 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 BMP8AQ7Z5Y6 402 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 TMCO2Q7Z6W1 182 aaPredicted RBP10.06□□□□□ -0.8
DDX39B-221ENST00000484566 NEDD1Q8NHV4 660 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 ATOH1Q92858 354 aaPredicted RBP10.06□□□□□ -0.8
DDX39B-221ENST00000484566 CHMP4CQ96CF2 233 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 RAD9AQ99638 391 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 IRF2BPLQ9H1B7 796 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 CTNNA3Q9UI47 895 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 PRR12Q9ULL5 1215 aa10.06□□□□□ -0.8
DDX39B-221ENST00000484566 ABHD14A-ACY1A0A1B0GW23 586 aa10.05□□□□□ -0.8
DDX39B-221ENST00000484566 RBM47A0AV96 593 aaKnown RBP10.05□□□□□ -0.8
DDX39B-221ENST00000484566 B4DLN1 442 aa10.05□□□□□ -0.8
DDX39B-221ENST00000484566 GPAA1O43292 621 aa10.05□□□□□ -0.8
DDX39B-221ENST00000484566 CCNYL3P0C7X3 344 aa10.05□□□□□ -0.8
DDX39B-221ENST00000484566 SELPP16109 830 aa10.05□□□□□ -0.8
DDX39B-221ENST00000484566 MRPL12P52815 198 aaKnown RBP10.05□□□□□ -0.8
DDX39B-221ENST00000484566 SNAP25P60880 206 aa10.05□□□□□ -0.8
DDX39B-221ENST00000484566 BAATQ14032 418 aaPredicted RBP10.05□□□□□ -0.8
DDX39B-221ENST00000484566 CCDC96Q2M329 555 aa10.05□□□□□ -0.8
DDX39B-221ENST00000484566 LIAT1Q6ZQX7 453 aa10.05□□□□□ -0.8
DDX39B-221ENST00000484566 ZNF598Q86UK7 904 aaKnown RBP10.05□□□□□ -0.8
DDX39B-221ENST00000484566 SCFD2Q8WU76 684 aa10.05□□□□□ -0.8
DDX39B-221ENST00000484566 PPP1R13LQ8WUF5 828 aa10.05□□□□□ -0.8
DDX39B-221ENST00000484566 APPBP2Q92624 585 aa10.05□□□□□ -0.8
DDX39B-221ENST00000484566 PURBQ96QR8 312 aaKnown RBP10.05□□□□□ -0.8
DDX39B-221ENST00000484566 NACAP1Q9BZK3 213 aa10.05□□□□□ -0.8
DDX39B-221ENST00000484566 EPB41L4AQ9HCS5 686 aaPredicted RBP10.05□□□□□ -0.8
DDX39B-221ENST00000484566 RALYQ9UKM9 306 aaKnown RBP10.05□□□□□ -0.8
DDX39B-221ENST00000484566 STX8Q9UNK0 236 aa10.05□□□□□ -0.8
DDX39B-221ENST00000484566 MICAL3Q7RTP6 2002 aa10.05□□□□□ -0.8
DDX39B-221ENST00000484566 PRR23AA6NEV1 266 aa10.04□□□□□ -0.8
DDX39B-221ENST00000484566 A6NJR5 290 aa10.04□□□□□ -0.8
DDX39B-221ENST00000484566 CFAP99D6REC4 459 aa10.04□□□□□ -0.8
DDX39B-221ENST00000484566 H3BQ06 376 aaPredicted RBP10.04□□□□□ -0.8
DDX39B-221ENST00000484566 TXNP10599 105 aaKnown RBP10.04□□□□□ -0.8
DDX39B-221ENST00000484566 TFAP4Q01664 338 aa10.04□□□□□ -0.8
DDX39B-221ENST00000484566 IKBKEQ14164 716 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms