RNA–Protein interactions for RNA: ENST00000484404.1

ITGA4-210, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-210ENST00000484404 TGFB3P10600 412 aa15.77■□□□□ 0.12
ITGA4-210ENST00000484404 HOXD8P13378 290 aaPredicted RBP15.77■□□□□ 0.12
ITGA4-210ENST00000484404 ICAM3P32942 547 aa15.77■□□□□ 0.12
ITGA4-210ENST00000484404 HSPA4P34932 840 aa15.77■□□□□ 0.12
ITGA4-210ENST00000484404 METAP2P50579 478 aaKnown RBP eCLIP15.77■□□□□ 0.12
ITGA4-210ENST00000484404 FUT2Q10981 343 aa15.77■□□□□ 0.12
ITGA4-210ENST00000484404 TCTN1Q2MV58 587 aa15.77■□□□□ 0.12
ITGA4-210ENST00000484404 TSGA10IPQ3SY00 556 aa15.77■□□□□ 0.12
ITGA4-210ENST00000484404 LRRC8DQ7L1W4 858 aa15.77■□□□□ 0.12
ITGA4-210ENST00000484404 TMCO2Q7Z6W1 182 aaPredicted RBP15.77■□□□□ 0.12
ITGA4-210ENST00000484404 NLRX1Q86UT6 975 aa15.77■□□□□ 0.12
ITGA4-210ENST00000484404 FAM217BQ9NTX9 383 aaPredicted RBP15.77■□□□□ 0.12
ITGA4-210ENST00000484404 TMEM260Q9NX78 707 aa15.77■□□□□ 0.12
ITGA4-210ENST00000484404 MSRAQ9UJ68 235 aa15.77■□□□□ 0.12
ITGA4-210ENST00000484404 PCDHA6Q9UN73 950 aa15.77■□□□□ 0.12
ITGA4-210ENST00000484404 PCDHA8Q9Y5H6 950 aa15.77■□□□□ 0.12
ITGA4-210ENST00000484404 V9GY48 417 aaPredicted RBP15.77■□□□□ 0.12
ITGA4-210ENST00000484404 PRUNE2Q8WUY3 3088 aa15.77■□□□□ 0.11
ITGA4-210ENST00000484404 CHD7Q9P2D1 2997 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 TMEM265A0A087WTH1 108 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 H3BRB1 525 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 STXBP3O00186 592 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 ATP9AO75110 1047 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 PPFIA4O75335 1185 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 STAM2O75886 525 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 SMIM10L2AP0DMW4 78 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 SMIM10L2BP0DMW5 78 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 CKBP12277 381 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 ACTN1P12814 892 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 SELPP16109 830 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 ATP2A2P16615 1042 aaKnown RBP15.76■□□□□ 0.11
ITGA4-210ENST00000484404 ADD1P35611 737 aaKnown RBP15.76■□□□□ 0.11
ITGA4-210ENST00000484404 NEDD9Q14511 834 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 RAB30Q15771 203 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 BLOC1S2Q6QNY1 142 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 METTL7BQ6UX53 244 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 CAGE1Q8TC20 777 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 AFAP1L1Q8TED9 768 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 PPM1EQ8WY54 764 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 GPR20Q99678 358 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 TUT1Q9H6E5 874 aaKnown RBP15.76■□□□□ 0.11
ITGA4-210ENST00000484404 NLRC5Q86WI3 1866 aa15.76■□□□□ 0.11
ITGA4-210ENST00000484404 MYH9P35579 1960 aaKnown RBP15.75■□□□□ 0.11
ITGA4-210ENST00000484404 C17orf102A2RUQ5 167 aa15.75■□□□□ 0.11
ITGA4-210ENST00000484404 PFKMP08237 780 aa15.75■□□□□ 0.11
ITGA4-210ENST00000484404 CTSHP09668 335 aa15.75■□□□□ 0.11
ITGA4-210ENST00000484404 ITGB5P18084 799 aa15.75■□□□□ 0.11
ITGA4-210ENST00000484404 RFC2P35250 354 aa15.75■□□□□ 0.11
ITGA4-210ENST00000484404 ADCY7P51828 1080 aa15.75■□□□□ 0.11
ITGA4-210ENST00000484404 GPNMBQ14956 572 aa15.75■□□□□ 0.11
ITGA4-210ENST00000484404 ZNF618Q5T7W0 954 aa15.75■□□□□ 0.11
ITGA4-210ENST00000484404 PPP2R2DQ66LE6 453 aa15.75■□□□□ 0.11
ITGA4-210ENST00000484404 UIMC1Q96RL1 719 aa15.75■□□□□ 0.11
ITGA4-210ENST00000484404 CERS4Q9HA82 394 aa15.75■□□□□ 0.11
ITGA4-210ENST00000484404 SLC28A3Q9HAS3 691 aa15.75■□□□□ 0.11
ITGA4-210ENST00000484404 REV3LO60673 3130 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 ADAMTS3O15072 1205 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 TREHO43280 583 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 NBNO60934 754 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 HMGB1P09429 215 aaKnown RBP15.74■□□□□ 0.11
ITGA4-210ENST00000484404 KCNA2P16389 499 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 RPS6KB1P23443 525 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 MARK3P27448 753 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 THPOP40225 353 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 PTK7Q13308 1070 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 MTMR1Q13613 665 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 TRIM71Q2Q1W2 868 aaKnown RBP15.74■□□□□ 0.11
ITGA4-210ENST00000484404 USP38Q8NB14 1042 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 KCNB2Q92953 911 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 ATP6V0A1Q93050 837 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 PHKBQ93100 1093 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 GPRASP2Q96D09 838 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 LARP6Q9BRS8 491 aaKnown RBP15.74■□□□□ 0.11
ITGA4-210ENST00000484404 ANO3Q9BYT9 981 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 RIC8AQ9NPQ8 531 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 SETD4Q9NVD3 440 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 UBIAD1Q9Y5Z9 338 aa15.74■□□□□ 0.11
ITGA4-210ENST00000484404 SMCO2A6NFE2 343 aa15.73■□□□□ 0.11
ITGA4-210ENST00000484404 ARHGEF15O94989 841 aa15.73■□□□□ 0.11
ITGA4-210ENST00000484404 REC8O95072 547 aa15.73■□□□□ 0.11
ITGA4-210ENST00000484404 CA3P07451 260 aa15.73■□□□□ 0.11
ITGA4-210ENST00000484404 TCF7P36402 384 aaPredicted RBP15.73■□□□□ 0.11
ITGA4-210ENST00000484404 KCNJ6P48051 423 aa15.73■□□□□ 0.11
ITGA4-210ENST00000484404 DEFB103AP81534 67 aa15.73■□□□□ 0.11
ITGA4-210ENST00000484404 MBTPS1Q14703 1052 aa15.73■□□□□ 0.11
ITGA4-210ENST00000484404 JAKMIP3Q5VZ66 844 aa15.73■□□□□ 0.11
ITGA4-210ENST00000484404 XRRA1Q6P2D8 792 aa15.73■□□□□ 0.11
ITGA4-210ENST00000484404 TRAF7Q6Q0C0 670 aa15.73■□□□□ 0.11
ITGA4-210ENST00000484404 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.73■□□□□ 0.11
ITGA4-210ENST00000484404 CYP2W1Q8TAV3 490 aa15.73■□□□□ 0.11
ITGA4-210ENST00000484404 GAS2L1Q99501 681 aaPredicted RBP15.73■□□□□ 0.11
ITGA4-210ENST00000484404 RNPEPQ9H4A4 650 aa15.73■□□□□ 0.11
ITGA4-210ENST00000484404 NCOA5Q9HCD5 579 aaKnown RBP15.73■□□□□ 0.11
ITGA4-210ENST00000484404 EVPLQ92817 2033 aa15.73■□□□□ 0.11
ITGA4-210ENST00000484404 IGFBP4P22692 258 aa15.72■□□□□ 0.11
ITGA4-210ENST00000484404 WDR5P61964 334 aaKnown RBP15.72■□□□□ 0.11
ITGA4-210ENST00000484404 CCT2P78371 535 aaKnown RBP15.72■□□□□ 0.11
ITGA4-210ENST00000484404 ARHGAP4P98171 946 aa15.72■□□□□ 0.11
ITGA4-210ENST00000484404 CCDC85BQ15834 202 aaPredicted RBP15.72■□□□□ 0.11
ITGA4-210ENST00000484404 PPP1R18Q6NYC8 613 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms