RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 ITGA7Q13683 1181 aa18.51■□□□□ 0.55
COL2A1-206ENST00000483376 TRIM60Q495X7 471 aa18.51■□□□□ 0.55
COL2A1-206ENST00000483376 PRPF38BQ5VTL8 546 aaKnown RBP18.51■□□□□ 0.55
COL2A1-206ENST00000483376 NFRKBQ6P4R8 1299 aa18.51■□□□□ 0.55
COL2A1-206ENST00000483376 CYFIP1Q7L576 1253 aa18.51■□□□□ 0.55
COL2A1-206ENST00000483376 SESTD1Q86VW0 696 aa18.51■□□□□ 0.55
COL2A1-206ENST00000483376 TBCKQ8TEA7 893 aa18.51■□□□□ 0.55
COL2A1-206ENST00000483376 LENG9Q96B70 501 aa18.51■□□□□ 0.55
COL2A1-206ENST00000483376 GPR20Q99678 358 aa18.51■□□□□ 0.55
COL2A1-206ENST00000483376 KATNAL1Q9BW62 490 aa18.51■□□□□ 0.55
COL2A1-206ENST00000483376 AGO4Q9HCK5 861 aaKnown RBP18.51■□□□□ 0.55
COL2A1-206ENST00000483376 GJB4Q9NTQ9 266 aa18.51■□□□□ 0.55
COL2A1-206ENST00000483376 KIF3AQ9Y496 699 aa18.51■□□□□ 0.55
COL2A1-206ENST00000483376 HAS3O00219 553 aa18.5■□□□□ 0.55
COL2A1-206ENST00000483376 MYL3P08590 195 aa18.5■□□□□ 0.55
COL2A1-206ENST00000483376 CUL4AQ13619 759 aa18.5■□□□□ 0.55
COL2A1-206ENST00000483376 KRT40Q6A162 431 aa18.5■□□□□ 0.55
COL2A1-206ENST00000483376 FBXO18Q8NFZ0 1043 aa18.5■□□□□ 0.55
COL2A1-206ENST00000483376 KAT2BQ92831 832 aa18.5■□□□□ 0.55
COL2A1-206ENST00000483376 NAP1L4Q99733 375 aaKnown RBP18.5■□□□□ 0.55
COL2A1-206ENST00000483376 MYH7BA7E2Y1 1941 aa18.5■□□□□ 0.55
COL2A1-206ENST00000483376 CEP290O15078 2479 aa18.5■□□□□ 0.55
COL2A1-206ENST00000483376 CCDC194A0A1B0GVG4 234 aa18.49■□□□□ 0.55
COL2A1-206ENST00000483376 NOP56O00567 594 aaKnown RBP18.49■□□□□ 0.55
COL2A1-206ENST00000483376 ARP10275 920 aa18.49■□□□□ 0.55
COL2A1-206ENST00000483376 GCFC2P16383 781 aaKnown RBP18.49■□□□□ 0.55
COL2A1-206ENST00000483376 TLE2Q04725 743 aa18.49■□□□□ 0.55
COL2A1-206ENST00000483376 Q4G0T1 1027 aa18.49■□□□□ 0.55
COL2A1-206ENST00000483376 PPP4R3AQ6IN85 833 aa18.49■□□□□ 0.55
COL2A1-206ENST00000483376 PLA2G4DQ86XP0 818 aa18.49■□□□□ 0.55
COL2A1-206ENST00000483376 FAM126BQ8IXS8 530 aa18.49■□□□□ 0.55
COL2A1-206ENST00000483376 FAM184AQ8NB25 1140 aa18.49■□□□□ 0.55
COL2A1-206ENST00000483376 C8orf76Q96K31 380 aa18.49■□□□□ 0.55
COL2A1-206ENST00000483376 SDF4Q9BRK5 362 aa18.49■□□□□ 0.55
COL2A1-206ENST00000483376 BCAS3Q9H6U6 928 aa18.49■□□□□ 0.55
COL2A1-206ENST00000483376 JPH1Q9HDC5 661 aaPredicted RBP18.49■□□□□ 0.55
COL2A1-206ENST00000483376 ATP11BQ9Y2G3 1177 aa18.49■□□□□ 0.55
COL2A1-206ENST00000483376 DCDC2CA8MYV0 355 aa18.48■□□□□ 0.55
COL2A1-206ENST00000483376 IPO5O00410 1097 aaKnown RBP18.48■□□□□ 0.55
COL2A1-206ENST00000483376 DHX15O43143 795 aaKnown RBP18.48■□□□□ 0.55
COL2A1-206ENST00000483376 DTNBO60941 627 aa18.48■□□□□ 0.55
COL2A1-206ENST00000483376 CD4P01730 458 aa18.48■□□□□ 0.55
COL2A1-206ENST00000483376 ITGB3BPQ13352 177 aaPredicted RBP18.48■□□□□ 0.55
COL2A1-206ENST00000483376 DIS3L2Q8IYB7 885 aaKnown RBP18.48■□□□□ 0.55
COL2A1-206ENST00000483376 C7orf61Q8IZ16 206 aa18.48■□□□□ 0.55
COL2A1-206ENST00000483376 OXER1Q8TDS5 423 aa18.48■□□□□ 0.55
COL2A1-206ENST00000483376 SEPT1Q8WYJ6 367 aa18.48■□□□□ 0.55
COL2A1-206ENST00000483376 SNX21Q969T3 373 aa18.48■□□□□ 0.55
COL2A1-206ENST00000483376 VTI1AQ96AJ9 217 aa18.48■□□□□ 0.55
COL2A1-206ENST00000483376 C16orf70Q9BSU1 422 aa18.48■□□□□ 0.55
COL2A1-206ENST00000483376 TBC1D22BQ9NU19 505 aa18.48■□□□□ 0.55
COL2A1-206ENST00000483376 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.48■□□□□ 0.55
COL2A1-206ENST00000483376 CLTBP09497 229 aa18.47■□□□□ 0.55
COL2A1-206ENST00000483376 FAAP100Q0VG06 881 aa18.47■□□□□ 0.55
COL2A1-206ENST00000483376 SAFBQ15424 915 aaKnown RBP eCLIP18.47■□□□□ 0.55
COL2A1-206ENST00000483376 PRR16Q569H4 304 aa18.47■□□□□ 0.55
COL2A1-206ENST00000483376 NEK8Q86SG6 692 aa18.47■□□□□ 0.55
COL2A1-206ENST00000483376 FOXP1Q9H334 677 aaPredicted RBP18.47■□□□□ 0.55
COL2A1-206ENST00000483376 PDLIM7Q9NR12 457 aa18.47■□□□□ 0.55
COL2A1-206ENST00000483376 SLC9A2Q9UBY0 812 aa18.47■□□□□ 0.55
COL2A1-206ENST00000483376 EMSYQ7Z589 1322 aa18.47■□□□□ 0.55
COL2A1-206ENST00000483376 BTBD18B2RXH4 712 aa18.46■□□□□ 0.55
COL2A1-206ENST00000483376 H0YGN5 161 aa18.46■□□□□ 0.55
COL2A1-206ENST00000483376 KIAA0355O15063 1070 aa18.46■□□□□ 0.55
COL2A1-206ENST00000483376 TLR3O15455 904 aaKnown RBP18.46■□□□□ 0.55
COL2A1-206ENST00000483376 ATG7O95352 703 aa18.46■□□□□ 0.55
COL2A1-206ENST00000483376 LGALS2P05162 132 aa18.46■□□□□ 0.55
COL2A1-206ENST00000483376 PSMC6P62333 389 aa18.46■□□□□ 0.55
COL2A1-206ENST00000483376 NR5A1Q13285 461 aa18.46■□□□□ 0.55
COL2A1-206ENST00000483376 INF2Q27J81 1249 aa18.46■□□□□ 0.55
COL2A1-206ENST00000483376 NBPF20Q3BBV1 942 aa18.46■□□□□ 0.55
COL2A1-206ENST00000483376 PIK3AP1Q6ZUJ8 805 aa18.46■□□□□ 0.55
COL2A1-206ENST00000483376 RIT2Q99578 217 aa18.46■□□□□ 0.55
COL2A1-206ENST00000483376 ZNF577Q9BSK1 485 aa18.46■□□□□ 0.55
COL2A1-206ENST00000483376 TBX21Q9UL17 535 aa18.46■□□□□ 0.55
COL2A1-206ENST00000483376 GSTTP1A0A1W2PQM5 241 aa18.45■□□□□ 0.54
COL2A1-206ENST00000483376 H3BRB1 525 aa18.45■□□□□ 0.54
COL2A1-206ENST00000483376 PQBP1O60828 265 aaKnown RBP18.45■□□□□ 0.54
COL2A1-206ENST00000483376 LGR5O75473 907 aa18.45■□□□□ 0.54
COL2A1-206ENST00000483376 SUPT20HL2P0C7V6 817 aa18.45■□□□□ 0.54
COL2A1-206ENST00000483376 HOXC8P31273 242 aa18.45■□□□□ 0.54
COL2A1-206ENST00000483376 PSEN2P49810 448 aa18.45■□□□□ 0.54
COL2A1-206ENST00000483376 MFSD10Q14728 455 aa18.45■□□□□ 0.54
COL2A1-206ENST00000483376 ZNF746Q6NUN9 644 aaPredicted RBP18.45■□□□□ 0.54
COL2A1-206ENST00000483376 SLC5A5Q92911 643 aa18.45■□□□□ 0.54
COL2A1-206ENST00000483376 INTS4Q96HW7 963 aaKnown RBP18.45■□□□□ 0.54
COL2A1-206ENST00000483376 TUT1Q9H6E5 874 aaKnown RBP18.45■□□□□ 0.54
COL2A1-206ENST00000483376 ZNF215Q9UL58 517 aaPredicted RBP18.45■□□□□ 0.54
COL2A1-206ENST00000483376 RANBP2P49792 3224 aaKnown RBP18.45■□□□□ 0.54
COL2A1-206ENST00000483376 IGKV6D-21A0A0A0MT36 114 aa18.44■□□□□ 0.54
COL2A1-206ENST00000483376 TBX3O15119 743 aa18.44■□□□□ 0.54
COL2A1-206ENST00000483376 MSH4O15457 936 aa18.44■□□□□ 0.54
COL2A1-206ENST00000483376 TDP2O95551 362 aa18.44■□□□□ 0.54
COL2A1-206ENST00000483376 ZNF286BP0CG31 522 aa18.44■□□□□ 0.54
COL2A1-206ENST00000483376 TCF7P36402 384 aaPredicted RBP18.44■□□□□ 0.54
COL2A1-206ENST00000483376 KRT76Q01546 638 aa18.44■□□□□ 0.54
COL2A1-206ENST00000483376 KIAA0753Q2KHM9 967 aa18.44■□□□□ 0.54
COL2A1-206ENST00000483376 EARS2Q5JPH6 523 aaKnown RBP18.44■□□□□ 0.54
COL2A1-206ENST00000483376 SMAP1Q8IYB5 467 aaPredicted RBP18.44■□□□□ 0.54
COL2A1-206ENST00000483376 ETNPPLQ8TBG4 499 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms