RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 RSPH10BP0C881 870 aa16.11■□□□□ 0.17
VARS-226ENST00000483275 ANTXR2P58335 489 aa16.11■□□□□ 0.17
VARS-226ENST00000483275 ERVK-21P61565 698 aa16.11■□□□□ 0.17
VARS-226ENST00000483275 MRPS9P82933 396 aaKnown RBP16.11■□□□□ 0.17
VARS-226ENST00000483275 AAMPQ13685 434 aa16.11■□□□□ 0.17
VARS-226ENST00000483275 ATP6V0A1Q93050 837 aa16.11■□□□□ 0.17
VARS-226ENST00000483275 RIOX1Q9H6W3 641 aa16.11■□□□□ 0.17
VARS-226ENST00000483275 RTEL1Q9NZ71 1219 aa16.11■□□□□ 0.17
VARS-226ENST00000483275 H3BRB1 525 aa16.1■□□□□ 0.17
VARS-226ENST00000483275 PPFIA4O75335 1185 aa16.1■□□□□ 0.17
VARS-226ENST00000483275 TRDNQ13061 729 aa16.1■□□□□ 0.17
VARS-226ENST00000483275 MKRN4PQ13434 485 aaPredicted RBP16.1■□□□□ 0.17
VARS-226ENST00000483275 COL9A3Q14050 684 aaPredicted RBP16.1■□□□□ 0.17
VARS-226ENST00000483275 WTAPQ15007 396 aa16.1■□□□□ 0.17
VARS-226ENST00000483275 CYFIP1Q7L576 1253 aa16.1■□□□□ 0.17
VARS-226ENST00000483275 TUT1Q9H6E5 874 aaKnown RBP16.1■□□□□ 0.17
VARS-226ENST00000483275 CD320Q9NPF0 282 aa16.1■□□□□ 0.17
VARS-226ENST00000483275 SETD4Q9NVD3 440 aa16.1■□□□□ 0.17
VARS-226ENST00000483275 RALGAPA2Q2PPJ7 1873 aa16.1■□□□□ 0.17
VARS-226ENST00000483275 PNMA6FA0A0J9YX94 578 aa16.09■□□□□ 0.17
VARS-226ENST00000483275 E7EWF7 191 aa16.09■□□□□ 0.17
VARS-226ENST00000483275 NOP56O00567 594 aaKnown RBP16.09■□□□□ 0.17
VARS-226ENST00000483275 UPP2O95045 317 aa16.09■□□□□ 0.17
VARS-226ENST00000483275 PARNO95453 639 aaKnown RBP16.09■□□□□ 0.17
VARS-226ENST00000483275 TROAPQ12815 778 aa16.09■□□□□ 0.17
VARS-226ENST00000483275 UTP14CQ5TAP6 766 aaKnown RBP16.09■□□□□ 0.17
VARS-226ENST00000483275 KCNV1Q6PIU1 500 aa16.09■□□□□ 0.17
VARS-226ENST00000483275 RALYLQ86SE5 291 aaKnown RBP16.09■□□□□ 0.17
VARS-226ENST00000483275 FBXO22Q8NEZ5 403 aa16.09■□□□□ 0.17
VARS-226ENST00000483275 UBE2ZQ9H832 354 aaPredicted RBP16.09■□□□□ 0.17
VARS-226ENST00000483275 FRMPD4Q14CM0 1322 aa16.09■□□□□ 0.17
VARS-226ENST00000483275 EMSYQ7Z589 1322 aa16.09■□□□□ 0.17
VARS-226ENST00000483275 LOXHD1Q8IVV2 1947 aa16.08■□□□□ 0.16
VARS-226ENST00000483275 EFCAB14O75071 495 aa16.08■□□□□ 0.16
VARS-226ENST00000483275 AMHP03971 560 aa16.08■□□□□ 0.16
VARS-226ENST00000483275 KCNA5P22460 613 aa16.08■□□□□ 0.16
VARS-226ENST00000483275 CHMLP26374 656 aa16.08■□□□□ 0.16
VARS-226ENST00000483275 HOXC8P31273 242 aa16.08■□□□□ 0.16
VARS-226ENST00000483275 IRX6P78412 446 aaPredicted RBP16.08■□□□□ 0.16
VARS-226ENST00000483275 USP17L6PQ6QN14 398 aa16.08■□□□□ 0.16
VARS-226ENST00000483275 RAB11FIP4Q86YS3 637 aa16.08■□□□□ 0.16
VARS-226ENST00000483275 INPP4AQ96PE3 977 aaPredicted RBP16.08■□□□□ 0.16
VARS-226ENST00000483275 GPR20Q99678 358 aa16.08■□□□□ 0.16
VARS-226ENST00000483275 RNPEPQ9H4A4 650 aa16.08■□□□□ 0.16
VARS-226ENST00000483275 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
VARS-226ENST00000483275 KIAA1671Q9BY89 1806 aa16.08■□□□□ 0.16
VARS-226ENST00000483275 ERICH2A1L162 156 aa16.07■□□□□ 0.16
VARS-226ENST00000483275 CSPG5O95196 566 aa16.07■□□□□ 0.16
VARS-226ENST00000483275 TGFB3P10600 412 aa16.07■□□□□ 0.16
VARS-226ENST00000483275 PLEKHG4Q58EX7 1191 aa16.07■□□□□ 0.16
VARS-226ENST00000483275 CMTR1Q8N1G2 835 aaKnown RBP16.07■□□□□ 0.16
VARS-226ENST00000483275 C1QTNF1Q9BXJ1 281 aa16.07■□□□□ 0.16
VARS-226ENST00000483275 MAP3K20Q9NYL2 800 aaKnown RBP16.07■□□□□ 0.16
VARS-226ENST00000483275 PKD2L1Q9P0L9 805 aa16.07■□□□□ 0.16
VARS-226ENST00000483275 INSL6Q9Y581 213 aa16.07■□□□□ 0.16
VARS-226ENST00000483275 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.06■□□□□ 0.16
VARS-226ENST00000483275 hCG_1642624A0A1W2PR95 340 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 SPATA31C2B4DYI2 1134 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 PLEKHA8P1O95397 391 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 RXRAP19793 462 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 PLA2G5P39877 138 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 HTRA4P83105 476 aaPredicted RBP16.06■□□□□ 0.16
VARS-226ENST00000483275 ARHGAP4P98171 946 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 EPC2Q52LR7 807 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 METTL7BQ6UX53 244 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 RUFY4Q6ZNE9 571 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 CATIPQ7Z7H3 387 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 MB21D2Q8IYB1 491 aaPredicted RBP16.06■□□□□ 0.16
VARS-226ENST00000483275 NCOA7Q8NI08 942 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 LMBR1Q8WVP7 490 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 SEPT8Q92599 483 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 ZBTB10Q96DT7 871 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 YME1L1Q96TA2 773 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 LRFN3Q9BTN0 628 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 C11orf16Q9NQ32 467 aa16.06■□□□□ 0.16
VARS-226ENST00000483275 TRIOO75962 3097 aa16.05■□□□□ 0.16
VARS-226ENST00000483275 H3BQ06 376 aaPredicted RBP16.05■□□□□ 0.16
VARS-226ENST00000483275 FIBPO43427 364 aa16.05■□□□□ 0.16
VARS-226ENST00000483275 MARK3P27448 753 aa16.05■□□□□ 0.16
VARS-226ENST00000483275 SART3Q15020 963 aaKnown RBP16.05■□□□□ 0.16
VARS-226ENST00000483275 GNPTABQ3T906 1256 aa16.05■□□□□ 0.16
VARS-226ENST00000483275 ZNF654Q8IZM8 581 aa16.05■□□□□ 0.16
VARS-226ENST00000483275 SMARCC2Q8TAQ2 1214 aa16.05■□□□□ 0.16
VARS-226ENST00000483275 SP7Q8TDD2 431 aaPredicted RBP16.05■□□□□ 0.16
VARS-226ENST00000483275 IGDCC4Q8TDY8 1250 aa16.05■□□□□ 0.16
VARS-226ENST00000483275 IFIH1Q9BYX4 1025 aaKnown RBP16.05■□□□□ 0.16
VARS-226ENST00000483275 LY9Q9HBG7 655 aa16.05■□□□□ 0.16
VARS-226ENST00000483275 COL4A6Q14031 1691 aa16.05■□□□□ 0.16
VARS-226ENST00000483275 MUC6Q6W4X9 2439 aa16.04■□□□□ 0.16
VARS-226ENST00000483275 SGSM2O43147 1006 aa16.04■□□□□ 0.16
VARS-226ENST00000483275 GHRP10912 638 aa16.04■□□□□ 0.16
VARS-226ENST00000483275 IL9P15248 144 aa16.04■□□□□ 0.16
VARS-226ENST00000483275 ICAM3P32942 547 aa16.04■□□□□ 0.16
VARS-226ENST00000483275 UBE2SQ16763 222 aa16.04■□□□□ 0.16
VARS-226ENST00000483275 EP400NLQ6ZTU2 488 aa16.04■□□□□ 0.16
VARS-226ENST00000483275 SAMD3Q8N6K7 520 aa16.04■□□□□ 0.16
VARS-226ENST00000483275 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.04■□□□□ 0.16
VARS-226ENST00000483275 FAM122AQ96E09 287 aa16.04■□□□□ 0.16
VARS-226ENST00000483275 USP26Q9BXU7 913 aa16.04■□□□□ 0.16
VARS-226ENST00000483275 LMCD1Q9NZU5 365 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms