RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 DTNBO60941 627 aa13.88□□□□□ -0.19
HDLBP-239ENST00000483086 PPFIA4O75335 1185 aa13.88□□□□□ -0.19
HDLBP-239ENST00000483086 FGBP02675 491 aa13.88□□□□□ -0.19
HDLBP-239ENST00000483086 LGALS2P05162 132 aa13.88□□□□□ -0.19
HDLBP-239ENST00000483086 SUPT20HL2P0C7V6 817 aa13.88□□□□□ -0.19
HDLBP-239ENST00000483086 MYOGP15173 224 aa13.88□□□□□ -0.19
HDLBP-239ENST00000483086 HOXC8P31273 242 aa13.88□□□□□ -0.19
HDLBP-239ENST00000483086 CLK2P49760 499 aaKnown RBP13.88□□□□□ -0.19
HDLBP-239ENST00000483086 MBTPS1Q14703 1052 aa13.88□□□□□ -0.19
HDLBP-239ENST00000483086 ZNF697Q5TEC3 545 aa13.88□□□□□ -0.19
HDLBP-239ENST00000483086 PSRC1Q6PGN9 363 aaPredicted RBP13.88□□□□□ -0.19
HDLBP-239ENST00000483086 KCNV1Q6PIU1 500 aa13.88□□□□□ -0.19
HDLBP-239ENST00000483086 BLOC1S2Q6QNY1 142 aa13.88□□□□□ -0.19
HDLBP-239ENST00000483086 MYLIPQ8WY64 445 aa13.88□□□□□ -0.19
HDLBP-239ENST00000483086 PHKBQ93100 1093 aa13.88□□□□□ -0.19
HDLBP-239ENST00000483086 NCOA5Q9HCD5 579 aaKnown RBP13.88□□□□□ -0.19
HDLBP-239ENST00000483086 BARHL2Q9NY43 387 aa13.88□□□□□ -0.19
HDLBP-239ENST00000483086 STXBP5LQ9Y2K9 1186 aa13.88□□□□□ -0.19
HDLBP-239ENST00000483086 YBX2Q9Y2T7 364 aaKnown RBP13.88□□□□□ -0.19
HDLBP-239ENST00000483086 PITPNM1O00562 1244 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 EDIL3O43854 480 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 ARHGEF15O94989 841 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 NEFLP07196 543 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 HMGB1P09429 215 aaKnown RBP13.87□□□□□ -0.19
HDLBP-239ENST00000483086 METAP2P50579 478 aaKnown RBP eCLIP13.87□□□□□ -0.191e-7■■□□□ 12
HDLBP-239ENST00000483086 RABGGTBP53611 331 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 RCAN1P53805 252 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 EVCP57679 992 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 SP4Q02446 784 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 RBL2Q08999 1139 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 GRIN2CQ14957 1233 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 METTL7BQ6UX53 244 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 SYNE3Q6ZMZ3 975 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 CUL5Q93034 780 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 MLXIPQ9HAP2 919 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 ZSWIM6Q9HCJ5 1215 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 RIC8AQ9NPQ8 531 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 PKD2L1Q9P0L9 805 aa13.87□□□□□ -0.19
HDLBP-239ENST00000483086 NAP1L2Q9ULW6 460 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-239ENST00000483086 GSTTP1A0A1W2PQM5 241 aa13.86□□□□□ -0.19
HDLBP-239ENST00000483086 NBNO60934 754 aa13.86□□□□□ -0.19
HDLBP-239ENST00000483086 STAM2O75886 525 aa13.86□□□□□ -0.19
HDLBP-239ENST00000483086 REC8O95072 547 aa13.86□□□□□ -0.19
HDLBP-239ENST00000483086 ARP10275 920 aa13.86□□□□□ -0.19
HDLBP-239ENST00000483086 CKBP12277 381 aa13.86□□□□□ -0.19
HDLBP-239ENST00000483086 PDIA3P30101 505 aaKnown RBP13.86□□□□□ -0.19
HDLBP-239ENST00000483086 NAPAP54920 295 aa13.86□□□□□ -0.19
HDLBP-239ENST00000483086 PFKFB3Q16875 520 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-239ENST00000483086 GNPTABQ3T906 1256 aa13.86□□□□□ -0.19
HDLBP-239ENST00000483086 C7orf31Q8N865 590 aa13.86□□□□□ -0.19
HDLBP-239ENST00000483086 CRYGNQ8WXF5 182 aa13.86□□□□□ -0.19
HDLBP-239ENST00000483086 SENP7Q9BQF6 1050 aa13.86□□□□□ -0.19
HDLBP-239ENST00000483086 ANO3Q9BYT9 981 aa13.86□□□□□ -0.19
HDLBP-239ENST00000483086 UPF3BQ9BZI7 483 aaKnown RBP13.86□□□□□ -0.19
HDLBP-239ENST00000483086 SMCO2A6NFE2 343 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 H3BRB1 525 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 TREHO43280 583 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 SMIM10L2AP0DMW4 78 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 SMIM10L2BP0DMW5 78 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 CCT2P78371 535 aaKnown RBP13.85□□□□□ -0.19
HDLBP-239ENST00000483086 ADAM17P78536 824 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 ITGB3BPQ13352 177 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-239ENST00000483086 NEDD9Q14511 834 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 ZNF618Q5T7W0 954 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 XRRA1Q6P2D8 792 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 RUFY3Q7L099 469 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 SPRED2Q7Z698 418 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 TMCO2Q7Z6W1 182 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-239ENST00000483086 GPRASP2Q96D09 838 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 PCYT2Q99447 389 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 RNPEPQ9H4A4 650 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 TUT1Q9H6E5 874 aaKnown RBP13.85□□□□□ -0.19
HDLBP-239ENST00000483086 JADE2Q9NQC1 790 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 COL4A4P53420 1690 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-239ENST00000483086 CUL9Q8IWT3 2517 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 EVPLQ92817 2033 aa13.85□□□□□ -0.19
HDLBP-239ENST00000483086 MYH9P35579 1960 aaKnown RBP13.84□□□□□ -0.19
HDLBP-239ENST00000483086 SCG2P13521 617 aa13.84□□□□□ -0.19
HDLBP-239ENST00000483086 ADCY7P51828 1080 aa13.84□□□□□ -0.19
HDLBP-239ENST00000483086 UTP14CQ5TAP6 766 aaKnown RBP13.84□□□□□ -0.19
HDLBP-239ENST00000483086 JAKMIP3Q5VZ66 844 aa13.84□□□□□ -0.19
HDLBP-239ENST00000483086 PPP1R18Q6NYC8 613 aa13.84□□□□□ -0.19
HDLBP-239ENST00000483086 LRRC8DQ7L1W4 858 aa13.84□□□□□ -0.19
HDLBP-239ENST00000483086 SERINC5Q86VE9 423 aa13.84□□□□□ -0.19
HDLBP-239ENST00000483086 RASGRP4Q8TDF6 673 aa13.84□□□□□ -0.19
HDLBP-239ENST00000483086 TIFAQ96CG3 184 aa13.84□□□□□ -0.19
HDLBP-239ENST00000483086 ZBTB10Q96DT7 871 aa13.84□□□□□ -0.19
HDLBP-239ENST00000483086 UIMC1Q96RL1 719 aa13.84□□□□□ -0.19
HDLBP-239ENST00000483086 KATNAL1Q9BW62 490 aa13.84□□□□□ -0.19
HDLBP-239ENST00000483086 NKX2-4Q9H2Z4 354 aa13.84□□□□□ -0.19
HDLBP-239ENST00000483086 SETD4Q9NVD3 440 aa13.84□□□□□ -0.19
HDLBP-239ENST00000483086 NOD1Q9Y239 953 aa13.84□□□□□ -0.19
HDLBP-239ENST00000483086 SPDYE3A6NKU9 549 aa13.83□□□□□ -0.2
HDLBP-239ENST00000483086 FAM86B1E9PN63 330 aa13.83□□□□□ -0.2
HDLBP-239ENST00000483086 PRPF3O43395 683 aaKnown RBP13.83□□□□□ -0.2
HDLBP-239ENST00000483086 SEC24BO95487 1268 aa13.83□□□□□ -0.2
HDLBP-239ENST00000483086 CXCL10P02778 98 aa13.83□□□□□ -0.2
HDLBP-239ENST00000483086 FAM86B2P0C5J1 330 aa13.83□□□□□ -0.2
HDLBP-239ENST00000483086 SELPP16109 830 aa13.83□□□□□ -0.2
HDLBP-239ENST00000483086 TCF7P36402 384 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms