RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 PDCD2LQ9BRP1 358 aa13.06□□□□□ -0.32
GGPS1-205ENST00000482013 THAP9Q9H5L6 903 aa13.06□□□□□ -0.32
GGPS1-205ENST00000482013 RTN4Q9NQC3 1192 aaKnown RBP13.06□□□□□ -0.32
GGPS1-205ENST00000482013 PXMP2Q9NR77 195 aa13.06□□□□□ -0.32
GGPS1-205ENST00000482013 TBC1D22BQ9NU19 505 aa13.06□□□□□ -0.32
GGPS1-205ENST00000482013 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.06□□□□□ -0.32
GGPS1-205ENST00000482013 CTNND2Q9UQB3 1225 aa13.06□□□□□ -0.32
GGPS1-205ENST00000482013 GDAQ9Y2T3 454 aa13.06□□□□□ -0.32
GGPS1-205ENST00000482013 POTEB3A0JP26 581 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 EYA4O95677 639 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 ARP10275 920 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 CCND2P30279 289 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 CLCN1P35523 988 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 COPB2P35606 906 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 SLC12A3P55017 1021 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 PABPC4Q13310 644 aaKnown RBP eCLIP13.05□□□□□ -0.32
GGPS1-205ENST00000482013 FILIP1LQ4L180 1135 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 ARHGEF16Q5VV41 709 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 POTEBQ6S5H4 581 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 NSMFQ6X4W1 530 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.05□□□□□ -0.32
GGPS1-205ENST00000482013 FASTKD5Q7L8L6 764 aaKnown RBP13.05□□□□□ -0.32
GGPS1-205ENST00000482013 RIOX2Q8IUF8 465 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 CCDC65Q8IXS2 484 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 TRMT44Q8IYL2 757 aaKnown RBP13.05□□□□□ -0.32
GGPS1-205ENST00000482013 GUF1Q8N442 669 aaKnown RBP13.05□□□□□ -0.32
GGPS1-205ENST00000482013 NSUN6Q8TEA1 469 aaKnown RBP13.05□□□□□ -0.32
GGPS1-205ENST00000482013 RMDN3Q96TC7 470 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 ELP3Q9H9T3 547 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 HOMER2Q9NSB8 354 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 LIMA1Q9UHB6 759 aaKnown RBP13.05□□□□□ -0.32
GGPS1-205ENST00000482013 RIPK3Q9Y572 518 aa13.05□□□□□ -0.32
GGPS1-205ENST00000482013 A0A1B0GTH6 734 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 E9PMD0 336 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 EML1O00423 815 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 KIF20AO95235 890 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 ITGB5P18084 799 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 CYP11B2P19099 503 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 STX17P56962 302 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 FKBP1BP68106 108 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 UBXN2AP68543 259 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 MRPS9P82933 396 aaKnown RBP13.04□□□□□ -0.32
GGPS1-205ENST00000482013 BAATQ14032 418 aaPredicted RBP13.04□□□□□ -0.32
GGPS1-205ENST00000482013 TTLL12Q14166 644 aaPredicted RBP13.04□□□□□ -0.32
GGPS1-205ENST00000482013 SLC30A10Q6XR72 485 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 NLRX1Q86UT6 975 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 VSIG10LQ86VR7 867 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 FAM114A1Q8IWE2 563 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 SMYD4Q8IYR2 804 aaPredicted RBP13.04□□□□□ -0.32
GGPS1-205ENST00000482013 CCDC150Q8NCX0 1101 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 DNERQ8NFT8 737 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 P2RX5Q93086 422 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 GPRASP2Q96D09 838 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 WNK4Q96J92 1243 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 IWS1Q96ST2 819 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 AGO4Q9HCK5 861 aaKnown RBP13.04□□□□□ -0.32
GGPS1-205ENST00000482013 KCNH7Q9NS40 1196 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 SAMSN1Q9NSI8 373 aaKnown RBP13.04□□□□□ -0.32
GGPS1-205ENST00000482013 PANK4Q9NVE7 773 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 KCND2Q9NZV8 630 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 AGTPBP1Q9UPW5 1226 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 PFASO15067 1338 aa13.04□□□□□ -0.32
GGPS1-205ENST00000482013 FRMD3A2A2Y4 597 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 FGFR1OPO95684 399 aaKnown RBP13.03□□□□□ -0.32
GGPS1-205ENST00000482013 PTGS1P23219 599 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 IRX3P78415 501 aaPredicted RBP13.03□□□□□ -0.32
GGPS1-205ENST00000482013 STK4Q13043 487 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 COASYQ13057 564 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 NR1I3Q14994 352 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 EAPPQ56P03 285 aaPredicted RBP13.03□□□□□ -0.32
GGPS1-205ENST00000482013 CENPPQ6IPU0 288 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 TTI2Q6NXR4 508 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 GADL1Q6ZQY3 521 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 DYMQ7RTS9 669 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 GPBP1Q86WP2 473 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 VSTM4Q8IW00 320 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 LRRC8AQ8IWT6 810 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 RDM1Q8NG50 284 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 GTF3C2Q8WUA4 911 aaPredicted RBP13.03□□□□□ -0.32
GGPS1-205ENST00000482013 OTUD5Q96G74 571 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 CDHR1Q96JP9 859 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 NACC1Q96RE7 527 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 CYP39A1Q9NYL5 469 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 NRBP1Q9UHY1 535 aa13.03□□□□□ -0.32
GGPS1-205ENST00000482013 POTEFA5A3E0 1075 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 DHX15O43143 795 aaKnown RBP13.02□□□□□ -0.33
GGPS1-205ENST00000482013 NRDCO43847 1150 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 SLITRK3O94933 977 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 LYPLA2O95372 231 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 SLC25A27O95847 323 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 P4HBP07237 508 aaKnown RBP13.02□□□□□ -0.33
GGPS1-205ENST00000482013 NR3C2P08235 984 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 POTEIP0CG38 1075 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 IDEP14735 1019 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 EIF2AK2P19525 551 aaKnown RBP13.02□□□□□ -0.33
GGPS1-205ENST00000482013 OSBPP22059 807 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 EEF1GP26641 437 aaKnown RBP13.02□□□□□ -0.33
GGPS1-205ENST00000482013 SFNP31947 248 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 LRRC63Q05C16 580 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 MTMR1Q13613 665 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms