RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 DGKDQ16760 1214 aa13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 ME3Q16798 604 aa13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 KIAA0753Q2KHM9 967 aa13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 UTP14CQ5TAP6 766 aaKnown RBP13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 MFSD5Q6N075 450 aa13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 CRYGNQ8WXF5 182 aa13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 ZNF274Q96GC6 653 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.06□□□□□ -0.321e-6■■■■□ 21.4
RAPGEF1-207ENST00000481260 JADE2Q9NQC1 790 aa13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 MROH7Q68CQ1 1323 aa13.06□□□□□ -0.32
RAPGEF1-207ENST00000481260 A0A1W2PPC1 479 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 GSTTP1A0A1W2PQM5 241 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 GRXCR1A8MXD5 290 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 FAM86B1E9PN63 330 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 TLR3O15455 904 aaKnown RBP13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 KPNA6O60684 536 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 PFKFB2O60825 505 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 FAM86B2P0C5J1 330 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 SREBF1P36956 1147 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 ANAPC15P60006 121 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 GPNMBQ14956 572 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 TCTN1Q2MV58 587 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 GNPTABQ3T906 1256 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 BRDTQ58F21 947 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 TMEM240Q5SV17 173 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 NFRKBQ6P4R8 1299 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 METTL7BQ6UX53 244 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 ZBTB10Q96DT7 871 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 MXRA8Q9BRK3 442 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 RNF26Q9BY78 433 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 OSBPL7Q9BZF2 842 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 ZMYND12Q9H0C1 365 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 CXXC1Q9P0U4 656 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 KCNJ14Q9UNX9 436 aa13.05□□□□□ -0.32
RAPGEF1-207ENST00000481260 STAM2O75886 525 aa13.04□□□□□ -0.32
RAPGEF1-207ENST00000481260 TGFB3P10600 412 aa13.04□□□□□ -0.32
RAPGEF1-207ENST00000481260 ARHGAP4P98171 946 aa13.04□□□□□ -0.32
RAPGEF1-207ENST00000481260 SSRP1Q08945 709 aaKnown RBP13.04□□□□□ -0.32
RAPGEF1-207ENST00000481260 MTMR1Q13613 665 aa13.04□□□□□ -0.32
RAPGEF1-207ENST00000481260 PTGISQ16647 500 aa13.04□□□□□ -0.32
RAPGEF1-207ENST00000481260 LRIT3Q3SXY7 679 aa13.04□□□□□ -0.32
RAPGEF1-207ENST00000481260 KCNV1Q6PIU1 500 aa13.04□□□□□ -0.32
RAPGEF1-207ENST00000481260 ZNF365Q70YC5 407 aa13.04□□□□□ -0.32
RAPGEF1-207ENST00000481260 GJA10Q969M2 543 aa13.04□□□□□ -0.32
RAPGEF1-207ENST00000481260 GPRASP2Q96D09 838 aa13.04□□□□□ -0.32
RAPGEF1-207ENST00000481260 PCYT2Q99447 389 aa13.04□□□□□ -0.32
RAPGEF1-207ENST00000481260 AGO4Q9HCK5 861 aaKnown RBP13.04□□□□□ -0.32
RAPGEF1-207ENST00000481260 KCNH7Q9NS40 1196 aa13.04□□□□□ -0.32
RAPGEF1-207ENST00000481260 GTF2IRD1Q9UHL9 959 aa13.04□□□□□ -0.32
RAPGEF1-207ENST00000481260 IGLV3-22A0A075B6J6 115 aa13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 ESYT2A0FGR8 921 aa13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 hCG_1984214I3L0E3 225 aa13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 DDX39AO00148 427 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 JAK2O60674 1132 aa13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 PPFIA4O75335 1185 aa13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 CCNE2O96020 404 aa13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 FDPSP14324 419 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 MARK3P27448 753 aa13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 NEK4P51957 841 aa13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 FOSBP53539 338 aa13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 TRIM71Q2Q1W2 868 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 XRRA1Q6P2D8 792 aa13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 TRAF7Q6Q0C0 670 aa13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 DEFB128Q7Z7B8 93 aa13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 NLRX1Q86UT6 975 aa13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 ZNF713Q8N859 430 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 RNPC3Q96LT9 517 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 SLKQ9H2G2 1235 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 RNPEPQ9H4A4 650 aa13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 SCN5AQ14524 2016 aa13.03□□□□□ -0.32
RAPGEF1-207ENST00000481260 PRUNE2Q8WUY3 3088 aa13.02□□□□□ -0.32
RAPGEF1-207ENST00000481260 H3BRB1 525 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 M0R2N6 131 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 MEIS1O00470 390 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 NOP56O00567 594 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 SMIM10L2AP0DMW4 78 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 SMIM10L2BP0DMW5 78 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 TCF7P36402 384 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 AP3B2Q13367 1082 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 NEDD9Q14511 834 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 MBTPS1Q14703 1052 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 CEP55Q53EZ4 464 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 SESTD1Q86VW0 696 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 REXO1Q8N1G1 1221 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 C7orf31Q8N865 590 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 OXER1Q8TDS5 423 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 LENG9Q96B70 501 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 FAM161BQ96MY7 647 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 SENP7Q9BQF6 1050 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 TUT1Q9H6E5 874 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 C6orf50Q9HD87 102 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 IL23AQ9NPF7 189 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 SETD4Q9NVD3 440 aa13.02□□□□□ -0.33
RAPGEF1-207ENST00000481260 FAM205CA6NFA0 338 aa13.01□□□□□ -0.33
RAPGEF1-207ENST00000481260 CPLX1O14810 134 aa13.01□□□□□ -0.33
RAPGEF1-207ENST00000481260 DHX15O43143 795 aaKnown RBP13.01□□□□□ -0.33
RAPGEF1-207ENST00000481260 TREHO43280 583 aa13.01□□□□□ -0.33
RAPGEF1-207ENST00000481260 FOSP01100 380 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF1-207ENST00000481260 PBX2P40425 430 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms