RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 STX6O43752 255 aa13.91□□□□□ -0.18
TRA2B-212ENST00000480461 STAM2O75886 525 aa13.91□□□□□ -0.18
TRA2B-212ENST00000480461 HSP90AA1P07900 732 aaKnown RBP13.91□□□□□ -0.18
TRA2B-212ENST00000480461 FOSL2P15408 326 aa13.91□□□□□ -0.18
TRA2B-212ENST00000480461 DDIT3P35638 169 aa13.91□□□□□ -0.18
TRA2B-212ENST00000480461 RTP1P59025 263 aa13.91□□□□□ -0.18
TRA2B-212ENST00000480461 SMAD3P84022 425 aaKnown RBP13.91□□□□□ -0.18
TRA2B-212ENST00000480461 BECN1Q14457 450 aa13.91□□□□□ -0.18
TRA2B-212ENST00000480461 NBR1Q14596 966 aa13.91□□□□□ -0.18
TRA2B-212ENST00000480461 SAFBQ15424 915 aaKnown RBP eCLIP13.91□□□□□ -0.18
TRA2B-212ENST00000480461 DUSP28Q4G0W2 176 aa13.91□□□□□ -0.18
TRA2B-212ENST00000480461 MCTP1Q6DN14 999 aa13.91□□□□□ -0.18
TRA2B-212ENST00000480461 FERMT3Q86UX7 667 aa13.91□□□□□ -0.18
TRA2B-212ENST00000480461 SCFD2Q8WU76 684 aa13.91□□□□□ -0.18
TRA2B-212ENST00000480461 GJA10Q969M2 543 aa13.91□□□□□ -0.18
TRA2B-212ENST00000480461 MPHOSPH6Q99547 160 aaKnown RBP13.91□□□□□ -0.18
TRA2B-212ENST00000480461 PRKAG2Q9UGJ0 569 aa13.91□□□□□ -0.18
TRA2B-212ENST00000480461 LRRC37A2A6NM11 1700 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 VPS37CA5D8V6 355 aaPredicted RBP13.9□□□□□ -0.18
TRA2B-212ENST00000480461 DNM1LO00429 736 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 DHX15O43143 795 aaKnown RBP13.9□□□□□ -0.18
TRA2B-212ENST00000480461 DYNC1LI2O43237 492 aaPredicted RBP13.9□□□□□ -0.18
TRA2B-212ENST00000480461 SLC37A4O43826 429 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 SORBS3O60504 671 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 DUSP11O75319 330 aaKnown RBP13.9□□□□□ -0.18
TRA2B-212ENST00000480461 PGK1P00558 417 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 AKR1A1P14550 325 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 KCNA2P16389 499 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 PDCP20941 246 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 ZNF76P36508 570 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 ARHGAP1Q07960 439 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 RESTQ13127 1097 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 ITGB3BPQ13352 177 aaPredicted RBP13.9□□□□□ -0.18
TRA2B-212ENST00000480461 LETM2Q2VYF4 491 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 PRR16Q569H4 304 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 FAM173BQ6P4H8 233 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 NIPA1Q7RTP0 329 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 NEK8Q86SG6 692 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 PLA2G4DQ86XP0 818 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 GPRASP2Q96D09 838 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 EHMT1Q9H9B1 1298 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 AGO4Q9HCK5 861 aaKnown RBP13.9□□□□□ -0.18
TRA2B-212ENST00000480461 BRMS1Q9HCU9 246 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 MRVI1Q9Y6F6 885 aa13.9□□□□□ -0.18
TRA2B-212ENST00000480461 MSH4O15457 936 aa13.89□□□□□ -0.19
TRA2B-212ENST00000480461 FIBPO43427 364 aa13.89□□□□□ -0.19
TRA2B-212ENST00000480461 ADAMTS4O75173 837 aa13.89□□□□□ -0.19
TRA2B-212ENST00000480461 TGFB3P10600 412 aa13.89□□□□□ -0.19
TRA2B-212ENST00000480461 ATP2B1P20020 1258 aa13.89□□□□□ -0.19
TRA2B-212ENST00000480461 UBA1P22314 1058 aaKnown RBP13.89□□□□□ -0.19
TRA2B-212ENST00000480461 NKX3-2P78367 333 aa13.89□□□□□ -0.19
TRA2B-212ENST00000480461 MTMR1Q13613 665 aa13.89□□□□□ -0.19
TRA2B-212ENST00000480461 TTLL4Q14679 1199 aa13.89□□□□□ -0.19
TRA2B-212ENST00000480461 Q4G0T1 1027 aa13.89□□□□□ -0.19
TRA2B-212ENST00000480461 CELF3Q5SZQ8 465 aaKnown RBP13.89□□□□□ -0.19
TRA2B-212ENST00000480461 MYSM1Q5VVJ2 828 aa13.89□□□□□ -0.19
TRA2B-212ENST00000480461 PPP4R3AQ6IN85 833 aa13.89□□□□□ -0.19
TRA2B-212ENST00000480461 CCSAPQ6IQ19 270 aaPredicted RBP13.89□□□□□ -0.19
TRA2B-212ENST00000480461 C4orf32Q8N8J7 132 aa13.89□□□□□ -0.19
TRA2B-212ENST00000480461 HAS1Q92839 578 aa13.89□□□□□ -0.19
TRA2B-212ENST00000480461 UPF3AQ9H1J1 476 aaKnown RBP13.89□□□□□ -0.19
TRA2B-212ENST00000480461 PKD2L1Q9P0L9 805 aa13.89□□□□□ -0.19
TRA2B-212ENST00000480461 RAPGEFL1Q9UHV5 662 aa13.89□□□□□ -0.19
TRA2B-212ENST00000480461 ATP11BQ9Y2G3 1177 aa13.89□□□□□ -0.19
TRA2B-212ENST00000480461 MYH7BA7E2Y1 1941 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 MAFGO15525 162 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 CCNT1O60563 726 aaKnown RBP13.88□□□□□ -0.19
TRA2B-212ENST00000480461 MSCO60682 206 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 GJA9P57773 515 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 BEX3Q00994 111 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 ZNF174Q15697 407 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 TJAP1Q5JTD0 557 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 FOXD4L5Q5VV16 416 aaPredicted RBP13.88□□□□□ -0.19
TRA2B-212ENST00000480461 MOXD1Q6UVY6 613 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 CYFIP1Q7L576 1253 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 NLRX1Q86UT6 975 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 USP38Q8NB14 1042 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 KLHDC9Q8NEP7 349 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 ETNPPLQ8TBG4 499 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 FOXD4L4Q8WXT5 416 aaPredicted RBP13.88□□□□□ -0.19
TRA2B-212ENST00000480461 SENP7Q9BQF6 1050 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 TMEM60Q9H2L4 133 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 Q9Y3F1 56 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 PCDHB6Q9Y5E3 794 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 SYNRGQ9UMZ2 1314 aa13.88□□□□□ -0.19
TRA2B-212ENST00000480461 TMEM265A0A087WTH1 108 aa13.87□□□□□ -0.19
TRA2B-212ENST00000480461 TNFRSF10AO00220 468 aa13.87□□□□□ -0.19
TRA2B-212ENST00000480461 GGPS1O95749 300 aa13.87□□□□□ -0.19
TRA2B-212ENST00000480461 RARBP10826 455 aa13.87□□□□□ -0.19
TRA2B-212ENST00000480461 LRRC41Q15345 812 aa13.87□□□□□ -0.19
TRA2B-212ENST00000480461 HSDL1Q3SXM5 330 aa13.87□□□□□ -0.19
TRA2B-212ENST00000480461 GNPTABQ3T906 1256 aa13.87□□□□□ -0.19
TRA2B-212ENST00000480461 KCNV1Q6PIU1 500 aa13.87□□□□□ -0.19
TRA2B-212ENST00000480461 TLK2Q86UE8 772 aa13.87□□□□□ -0.19
TRA2B-212ENST00000480461 AFG1LQ8WV93 481 aa13.87□□□□□ -0.19
TRA2B-212ENST00000480461 SLC5A5Q92911 643 aa13.87□□□□□ -0.19
TRA2B-212ENST00000480461 BADQ92934 168 aa13.87□□□□□ -0.19
TRA2B-212ENST00000480461 KCNMB3Q9NPA1 279 aa13.87□□□□□ -0.19
TRA2B-212ENST00000480461 XPNPEP3Q9NQH7 507 aa13.87□□□□□ -0.19
TRA2B-212ENST00000480461 PRDM5Q9NQX1 630 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms