RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 HYOU1Q9Y4L1 999 aa11.94□□□□□ -0.5
CHD6-208ENST00000480022 PAEPP09466 180 aa11.94□□□□□ -0.5
CHD6-208ENST00000480022 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
CHD6-208ENST00000480022 DNAJC14Q6Y2X3 702 aaPredicted RBP11.94□□□□□ -0.5
CHD6-208ENST00000480022 NFXL1Q6ZNB6 911 aa11.94□□□□□ -0.5
CHD6-208ENST00000480022 RAPGEF5Q92565 580 aa11.94□□□□□ -0.5
CHD6-208ENST00000480022 COA1Q9GZY4 146 aa11.94□□□□□ -0.5
CHD6-208ENST00000480022 EPB41L5Q9HCM4 733 aa11.94□□□□□ -0.5
CHD6-208ENST00000480022 CD209Q9NNX6 404 aa11.94□□□□□ -0.5
CHD6-208ENST00000480022 CAPN11Q9UMQ6 739 aa11.94□□□□□ -0.5
CHD6-208ENST00000480022 GLI1P08151 1106 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 TMOD1P28289 359 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 MEA1Q16626 185 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 GNPTABQ3T906 1256 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 LRIG3Q6UXM1 1119 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 MB21D2Q8IYB1 491 aaPredicted RBP11.93□□□□□ -0.5
CHD6-208ENST00000480022 CCDC170Q8IYT3 715 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 LARGE2Q8N3Y3 721 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 SDR16C5Q8N3Y7 309 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 B4GALNT2Q8NHY0 566 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 MKL1Q969V6 931 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 DBNDD1Q9H9R9 158 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 IQSEC3Q9UPP2 1182 aaPredicted RBP11.93□□□□□ -0.5
CHD6-208ENST00000480022 MYO5AQ9Y4I1 1855 aaKnown RBP11.93□□□□□ -0.5
CHD6-208ENST00000480022 ARAP2Q8WZ64 1704 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 SPDYE3A6NKU9 549 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 B4DLN1 442 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 BACH1O14867 736 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 IFIT3O14879 490 aaKnown RBP11.93□□□□□ -0.5
CHD6-208ENST00000480022 GRIN3BO60391 1043 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 COBLO75128 1261 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 SMIM24O75264 130 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 HEXIM1O94992 359 aaKnown RBP11.93□□□□□ -0.5
CHD6-208ENST00000480022 ALADP13716 330 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 CCND1P24385 295 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 CTCFP49711 727 aaPredicted RBP11.93□□□□□ -0.5
CHD6-208ENST00000480022 SCARF1Q14162 830 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 ZNF268Q14587 947 aaPredicted RBP11.93□□□□□ -0.5
CHD6-208ENST00000480022 TBC1D1Q86TI0 1168 aaPredicted RBP11.93□□□□□ -0.5
CHD6-208ENST00000480022 NOSTRINQ8IVI9 506 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 CCDC197Q8NCU1 140 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 RBM12Q9NTZ6 932 aaKnown RBP11.93□□□□□ -0.5
CHD6-208ENST00000480022 PANK4Q9NVE7 773 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 ZNHIT6Q9NWK9 470 aaKnown RBP11.93□□□□□ -0.5
CHD6-208ENST00000480022 SMARCAL1Q9NZC9 954 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 SLC12A4Q9UP95 1085 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 FER1L6Q2WGJ9 1857 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 MAST3O60307 1309 aa11.93□□□□□ -0.5
CHD6-208ENST00000480022 COL4A5P29400 1685 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 IL1R1P14778 569 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 HAND2P61296 217 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 GUCY2DQ02846 1103 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 DPYDQ12882 1025 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 BIRC3Q13489 604 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 NFRKBQ6P4R8 1299 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 NME8Q8N427 588 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 ZNF512BQ96KM6 892 aaPredicted RBP11.92□□□□□ -0.5
CHD6-208ENST00000480022 OSBPL1AQ9BXW6 950 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 NHEJ1Q9H9Q4 299 aaPredicted RBP11.92□□□□□ -0.5
CHD6-208ENST00000480022 PLCB1Q9NQ66 1216 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 EHD2Q9NZN4 543 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 SRPRBQ9Y5M8 271 aaKnown RBP11.92□□□□□ -0.5
CHD6-208ENST00000480022 ESYT3A0FGR9 886 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 PHF20L1A8MW92 1017 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 G3V3G9 751 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 STXBP3O00186 592 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 ORC4O43929 436 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 ECE2O60344 883 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 USO1O60763 962 aaKnown RBP11.92□□□□□ -0.5
CHD6-208ENST00000480022 PPFIA2O75334 1257 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 DRD4P21917 467 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 CASP1P29466 404 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 HSPA9P38646 679 aaKnown RBP11.92□□□□□ -0.5
CHD6-208ENST00000480022 MCAMP43121 646 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 METAP2P50579 478 aaKnown RBP eCLIP11.92□□□□□ -0.5
CHD6-208ENST00000480022 TOB1P50616 345 aaPredicted RBP11.92□□□□□ -0.5
CHD6-208ENST00000480022 ANTXR2P58335 489 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 PPP2R2AP63151 447 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 PPARDQ03181 441 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 RASGRF1Q13972 1273 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 PDIA5Q14554 519 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 ODF2Q5BJF6 829 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 DCAF8Q5TAQ9 597 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 MTHFD1LQ6UB35 978 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 USP49Q70CQ1 688 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 SPATA21Q7Z572 469 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 RALYLQ86SE5 291 aaKnown RBP11.92□□□□□ -0.5
CHD6-208ENST00000480022 GALNT15Q8N3T1 639 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 TEX9Q8N6V9 391 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 MB21D1Q8N884 522 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 ANKS4BQ8N8V4 417 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 NCOA7Q8NI08 942 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 ZFAND2BQ8WV99 257 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 PHKBQ93100 1093 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 PAGE5Q96GU1 130 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 PAG1Q9NWQ8 432 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 LMCD1Q9NZU5 365 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 RWDD2AQ9UIY3 292 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 CAPN6Q9Y6Q1 641 aa11.92□□□□□ -0.5
CHD6-208ENST00000480022 UQCRFS1P1P0C7P4 283 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms