RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 ZFYVE28Q9HCC9 887 aa9.67□□□□□ -0.86
TTC3-216ENST00000479930 COQ6Q9Y2Z9 468 aa9.67□□□□□ -0.86
TTC3-216ENST00000479930 ALG6Q9Y672 507 aa9.67□□□□□ -0.86
TTC3-216ENST00000479930 C5orf58C9J3I9 102 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 K7ENM7 598 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 BUB1BO60566 1050 aaPredicted RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 RXRAP19793 462 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 LSP1P33241 339 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 SLC16A1P53985 500 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 CAMK1Q14012 370 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 TCEAL5Q5H9L2 206 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 OSBPL6Q9BZF3 934 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 FAM129AQ9BZQ8 928 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 TMCC3Q9ULS5 477 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 PRG3Q9Y2Y8 225 aaPredicted RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 MYH11P35749 1972 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 FRMPD2Q68DX3 1309 aaPredicted RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 DDX5P17844 614 aaKnown RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 MAP3K21Q5TCX8 1036 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 WDR75Q8IWA0 830 aaKnown RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 KRT222Q8N1A0 295 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 PCMTD2Q9NV79 361 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 ZNF496Q96IT1 587 aaPredicted RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 MIS12Q9H081 205 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 CARD9Q9H257 536 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 FBXO2Q9UK22 296 aaPredicted RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 TTLL13PA6NNM8 815 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 RBBP4Q09028 425 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 KRT72Q14CN4 511 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 SHROOM1Q2M3G4 852 aaPredicted RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 CNKSR1Q969H4 720 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 FOPNLQ96NB1 174 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 TSSK1BQ9BXA7 367 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 PCDHA1Q9Y5I3 950 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 PRR23D1E9PI22 279 aaPredicted RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 GRIN3BO60391 1043 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 PRR23D2P0DMB1 279 aaPredicted RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 PMS1P54277 932 aaKnown RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 DMP1Q13316 513 aaPredicted RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 FOXR2Q6PJQ5 311 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 RSRC1Q96IZ7 334 aaKnown RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 LRRC37BQ96QE4 947 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 GUCA1BQ9UMX6 200 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 SNTNA6NMZ2 147 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 RAD17O75943 681 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 SPOPLQ6IQ16 392 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.66□□□□□ -0.86
TTC3-216ENST00000479930 FHDC1Q9C0D6 1143 aaPredicted RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 OLFML3Q9NRN5 406 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 RPS6KB2Q9UBS0 482 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 SETD1BQ9UPS6 1966 aaKnown RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 MICAL3Q7RTP6 2002 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 ADCY7P51828 1080 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 CATSPER4Q7RTX7 472 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 FGD2Q7Z6J4 655 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 RPAP2Q8IXW5 612 aaPredicted RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 SPIRE2Q8WWL2 714 aa9.66□□□□□ -0.86
TTC3-216ENST00000479930 MRPL11Q9Y3B7 192 aaKnown RBP9.66□□□□□ -0.86
TTC3-216ENST00000479930 POTEB3A0JP26 581 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 HSPD1P10809 573 aaKnown RBP9.65□□□□□ -0.86
TTC3-216ENST00000479930 HPDP32754 393 aaPredicted RBP9.65□□□□□ -0.86
TTC3-216ENST00000479930 CUL3Q13618 768 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 POTEBQ6S5H4 581 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 OR6B3Q8NGW1 331 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 TMEM161AQ9NX61 479 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 PCDHB8Q9UN66 801 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 LZTS1Q9Y250 596 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 PCDHB7Q9Y5E2 793 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 PCDHB4Q9Y5E5 795 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 SOGA1O94964 1423 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 MOCS2O96007 188 aaPredicted RBP9.65□□□□□ -0.86
TTC3-216ENST00000479930 ANKRD20A3Q5VUR7 823 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 ARMCX2Q7L311 632 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 ANKRD42Q8N9B4 389 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 SYMPKQ92797 1274 aaKnown RBP9.65□□□□□ -0.86
TTC3-216ENST00000479930 EIF3CQ99613 913 aaKnown RBP9.65□□□□□ -0.86
TTC3-216ENST00000479930 COPG1Q9Y678 874 aaKnown RBP9.65□□□□□ -0.86
TTC3-216ENST00000479930 FANCIQ9NVI1 1328 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 KIF2AO00139 706 aaPredicted RBP9.65□□□□□ -0.86
TTC3-216ENST00000479930 BMP15O95972 392 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 PDIA3P30101 505 aaKnown RBP9.65□□□□□ -0.86
TTC3-216ENST00000479930 ATN1P54259 1190 aaPredicted RBP9.65□□□□□ -0.86
TTC3-216ENST00000479930 GSTA3Q16772 222 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 METTL21CQ5VZV1 264 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 VPS16Q9H269 839 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 IFT122Q9HBG6 1241 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 F6X3S4 739 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 CLIC2O15247 247 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 TADA2AO75478 443 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 CCND2P30279 289 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 C21orf59P57076 290 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 NKX1-1Q15270 411 aaPredicted RBP9.65□□□□□ -0.86
TTC3-216ENST00000479930 KRBA2Q6ZNG9 492 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 NOC4LQ9BVI4 516 aaKnown RBP9.65□□□□□ -0.86
TTC3-216ENST00000479930 RNASEH1O60930 286 aaKnown RBP9.65□□□□□ -0.86
TTC3-216ENST00000479930 ARL4AP40617 200 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 PAG1Q9NWQ8 432 aa9.65□□□□□ -0.86
TTC3-216ENST00000479930 KDM1AO60341 852 aa9.65□□□□□ -0.87
TTC3-216ENST00000479930 UBASH3AP57075 661 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms