RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 ZNF543Q08ER8 600 aa12.6□□□□□ -0.39
CCDC58-205ENST00000479899 LY6KQ17RY6 165 aa12.6□□□□□ -0.39
CCDC58-205ENST00000479899 DNERQ8NFT8 737 aa12.6□□□□□ -0.39
CCDC58-205ENST00000479899 CAGE1Q8TC20 777 aa12.6□□□□□ -0.39
CCDC58-205ENST00000479899 AFAP1L1Q8TED9 768 aa12.6□□□□□ -0.39
CCDC58-205ENST00000479899 FAM227BQ96M60 508 aa12.6□□□□□ -0.39
CCDC58-205ENST00000479899 ZKSCAN3Q9BRR0 538 aa12.6□□□□□ -0.39
CCDC58-205ENST00000479899 ALG1Q9BT22 464 aa12.6□□□□□ -0.39
CCDC58-205ENST00000479899 UBA5Q9GZZ9 404 aa12.6□□□□□ -0.39
CCDC58-205ENST00000479899 WDR19Q8NEZ3 1342 aa12.6□□□□□ -0.39
CCDC58-205ENST00000479899 KIAA1217Q5T5P2 1943 aa12.59□□□□□ -0.39
CCDC58-205ENST00000479899 HOXA2O43364 376 aa12.59□□□□□ -0.39
CCDC58-205ENST00000479899 SORBS3O60504 671 aa12.59□□□□□ -0.39
CCDC58-205ENST00000479899 GH1P01241 217 aa12.59□□□□□ -0.39
CCDC58-205ENST00000479899 SELPP16109 830 aa12.59□□□□□ -0.39
CCDC58-205ENST00000479899 TCTN1Q2MV58 587 aa12.59□□□□□ -0.39
CCDC58-205ENST00000479899 SCUBE3Q8IX30 993 aa12.59□□□□□ -0.39
CCDC58-205ENST00000479899 TBC1D5Q92609 795 aa12.59□□□□□ -0.39
CCDC58-205ENST00000479899 ZNF516Q92618 1163 aa12.59□□□□□ -0.39
CCDC58-205ENST00000479899 DHX38Q92620 1227 aaKnown RBP12.59□□□□□ -0.39
CCDC58-205ENST00000479899 PCDHB15Q9Y5E8 787 aa12.59□□□□□ -0.39
CCDC58-205ENST00000479899 DHX16O60231 1041 aaKnown RBP12.58□□□□□ -0.4
CCDC58-205ENST00000479899 FGAP02671 866 aa12.58□□□□□ -0.4
CCDC58-205ENST00000479899 ZNF286BP0CG31 522 aa12.58□□□□□ -0.4
CCDC58-205ENST00000479899 ARHGAP1Q07960 439 aa12.58□□□□□ -0.4
CCDC58-205ENST00000479899 CDC37Q16543 378 aaPredicted RBP12.58□□□□□ -0.4
CCDC58-205ENST00000479899 CNKSR3Q6P9H4 555 aa12.58□□□□□ -0.4
CCDC58-205ENST00000479899 ZNF589Q86UQ0 364 aaPredicted RBP12.58□□□□□ -0.4
CCDC58-205ENST00000479899 TBC1D10CQ8IV04 446 aa12.58□□□□□ -0.4
CCDC58-205ENST00000479899 C7orf31Q8N865 590 aa12.58□□□□□ -0.4
CCDC58-205ENST00000479899 EVI5LQ96CN4 794 aa12.58□□□□□ -0.4
CCDC58-205ENST00000479899 TAAR1Q96RJ0 339 aa12.58□□□□□ -0.4
CCDC58-205ENST00000479899 HELLSQ9NRZ9 838 aa12.58□□□□□ -0.4
CCDC58-205ENST00000479899 TCP11L1Q9NUJ3 509 aa12.58□□□□□ -0.4
CCDC58-205ENST00000479899 COL20A1Q9P218 1284 aa12.58□□□□□ -0.4
CCDC58-205ENST00000479899 HDAC6Q9UBN7 1215 aa12.58□□□□□ -0.4
CCDC58-205ENST00000479899 PNMA2Q9UL42 364 aa12.58□□□□□ -0.4
CCDC58-205ENST00000479899 MYH6P13533 1939 aa12.58□□□□□ -0.4
CCDC58-205ENST00000479899 NEDD4P46934 1319 aa12.58□□□□□ -0.4
CCDC58-205ENST00000479899 LAMA4Q16363 1823 aa12.58□□□□□ -0.4
CCDC58-205ENST00000479899 NBNO60934 754 aa12.57□□□□□ -0.4
CCDC58-205ENST00000479899 FGRP09769 529 aa12.57□□□□□ -0.4
CCDC58-205ENST00000479899 CKBP12277 381 aa12.57□□□□□ -0.4
CCDC58-205ENST00000479899 EIF2AK2P19525 551 aaKnown RBP12.57□□□□□ -0.4
CCDC58-205ENST00000479899 NMIQ13287 307 aaPredicted RBP12.57□□□□□ -0.4
CCDC58-205ENST00000479899 GPNMBQ14956 572 aa12.57□□□□□ -0.4
CCDC58-205ENST00000479899 ALX1Q15699 326 aa12.57□□□□□ -0.4
CCDC58-205ENST00000479899 MCMDC2Q4G0Z9 681 aa12.57□□□□□ -0.4
CCDC58-205ENST00000479899 ANKRD45Q5TZF3 282 aa12.57□□□□□ -0.4
CCDC58-205ENST00000479899 CCDC62Q6P9F0 684 aa12.57□□□□□ -0.4
CCDC58-205ENST00000479899 MFSD6Q6ZSS7 791 aa12.57□□□□□ -0.4
CCDC58-205ENST00000479899 KAT2BQ92831 832 aa12.57□□□□□ -0.4
CCDC58-205ENST00000479899 TGS1Q96RS0 853 aaKnown RBP12.57□□□□□ -0.4
CCDC58-205ENST00000479899 CTAGE1Q96RT6 745 aa12.57□□□□□ -0.4
CCDC58-205ENST00000479899 UBE2ZQ9H832 354 aaPredicted RBP12.57□□□□□ -0.4
CCDC58-205ENST00000479899 GTF2IRD1Q9UHL9 959 aa12.57□□□□□ -0.4
CCDC58-205ENST00000479899 SLC27A5Q9Y2P5 690 aa12.57□□□□□ -0.4
CCDC58-205ENST00000479899 SALL3Q9BXA9 1300 aa12.57□□□□□ -0.4
CCDC58-205ENST00000479899 LINC01553A4QN01 128 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 GJB5O95377 273 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 SNHG28P0DPA3 235 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 HSPD1P10809 573 aaKnown RBP12.56□□□□□ -0.4
CCDC58-205ENST00000479899 CASTP20810 708 aaKnown RBP12.56□□□□□ -0.4
CCDC58-205ENST00000479899 KCNA5P22460 613 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 STXBP2Q15833 593 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 DGKDQ16760 1214 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 ARHGEF16Q5VV41 709 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 SESTD1Q86VW0 696 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 DHX37Q8IY37 1157 aaKnown RBP12.56□□□□□ -0.4
CCDC58-205ENST00000479899 SYTL5Q8TDW5 730 aaPredicted RBP12.56□□□□□ -0.4
CCDC58-205ENST00000479899 NSUN6Q8TEA1 469 aaKnown RBP12.56□□□□□ -0.4
CCDC58-205ENST00000479899 WNT8BQ93098 351 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 RMDN3Q96TC7 470 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 RAD9AQ99638 391 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 SUGCTQ9HAC7 445 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 CD320Q9NPF0 282 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 C11orf16Q9NQ32 467 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 MRVI1Q9Y6F6 885 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 ABCB11O95342 1321 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 CCDC171Q6TFL3 1326 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 NCOR1O75376 2440 aa12.56□□□□□ -0.4
CCDC58-205ENST00000479899 MYH7BA7E2Y1 1941 aa12.55□□□□□ -0.4
CCDC58-205ENST00000479899 IL9P15248 144 aa12.55□□□□□ -0.4
CCDC58-205ENST00000479899 ZNF200P98182 395 aaPredicted RBP12.55□□□□□ -0.4
CCDC58-205ENST00000479899 IKBKEQ14164 716 aa12.55□□□□□ -0.4
CCDC58-205ENST00000479899 KIAA0753Q2KHM9 967 aa12.55□□□□□ -0.4
CCDC58-205ENST00000479899 GPATCH4Q5T3I0 446 aaKnown RBP12.55□□□□□ -0.4
CCDC58-205ENST00000479899 ZNF618Q5T7W0 954 aa12.55□□□□□ -0.4
CCDC58-205ENST00000479899 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCDC58-205ENST00000479899 EP400NLQ6ZTU2 488 aa12.55□□□□□ -0.4
CCDC58-205ENST00000479899 MYOCDQ8IZQ8 938 aa12.55□□□□□ -0.4
CCDC58-205ENST00000479899 PNMA1Q8ND90 353 aa12.55□□□□□ -0.4
CCDC58-205ENST00000479899 ESR2Q92731 530 aa12.55□□□□□ -0.4
CCDC58-205ENST00000479899 C17orf80Q9BSJ5 609 aa12.55□□□□□ -0.4
CCDC58-205ENST00000479899 KATNAL1Q9BW62 490 aa12.55□□□□□ -0.4
CCDC58-205ENST00000479899 FAM117AQ9C073 453 aa12.55□□□□□ -0.4
CCDC58-205ENST00000479899 KAT14Q9H8E8 782 aa12.55□□□□□ -0.4
CCDC58-205ENST00000479899 VAT1LQ9HCJ6 419 aa12.55□□□□□ -0.4
CCDC58-205ENST00000479899 MICAL3Q7RTP6 2002 aa12.54□□□□□ -0.4
CCDC58-205ENST00000479899 ABHD14A-ACY1A0A1B0GW23 586 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms