RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 SEMA3FQ13275 785 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 RPS6KA1Q15418 735 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 NEK8Q86SG6 692 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 LARP4BQ92615 738 aaKnown RBP22.75■■□□□ 1.23
COL13A1-208ENST00000479733 NUDT12Q9BQG2 462 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 PLCB1Q9NQ66 1216 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 FBXL5Q9UKA1 691 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 LEMD3Q9Y2U8 911 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 ATP6V0A2Q9Y487 856 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 OPLAHO14841 1288 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 PARP9Q8IXQ6 854 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 DDX12PQ92771 950 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 SEC16BQ96JE7 1060 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 LRRC4CQ9HCJ2 640 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 LUC7LQ9NQ29 371 aaKnown RBP22.75■■□□□ 1.23
COL13A1-208ENST00000479733 A1CFQ9NQ94 594 aaKnown RBP22.75■■□□□ 1.23
COL13A1-208ENST00000479733 DONSONQ9NYP3 566 aa22.75■■□□□ 1.23
COL13A1-208ENST00000479733 GRM4Q14833 912 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 SNCBQ16143 134 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 CHADLQ6NUI6 762 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 FUKQ8N0W3 1084 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 GUF1Q8N442 669 aaKnown RBP22.74■■□□□ 1.23
COL13A1-208ENST00000479733 TSG101Q99816 390 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 ISCUQ9H1K1 167 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 FRMD3A2A2Y4 597 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 TMCO5BA8MYB1 307 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 KLRF2D3W0D1 207 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 TSPY3P0CV98 308 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 TSPY8P0CW00 308 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 ECHS1P30084 290 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 ELF1P32519 619 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 SLC18A3Q16572 532 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 C3orf67Q6ZVT6 689 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 TRIM31Q9BZY9 425 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 CEP72Q9P209 647 aa22.74■■□□□ 1.23
COL13A1-208ENST00000479733 TRAPPC3O43617 180 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 ADAMTS2O95450 1211 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 MAGOHP61326 146 aaKnown RBP22.73■■□□□ 1.23
COL13A1-208ENST00000479733 PREPLQ4J6C6 727 aaPredicted RBP22.73■■□□□ 1.23
COL13A1-208ENST00000479733 KCNK18Q7Z418 384 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 CPLX4Q7Z7G2 160 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 RAPGEF5Q92565 580 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 MAGOHBQ96A72 148 aaKnown RBP22.73■■□□□ 1.23
COL13A1-208ENST00000479733 PNMA5Q96PV4 448 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 ARPP21Q9UBL0 812 aaPredicted RBP22.73■■□□□ 1.23
COL13A1-208ENST00000479733 SLC12A6Q9UHW9 1150 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 MCM8Q9UJA3 840 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 H0YGN5 161 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 SART1O43290 800 aaKnown RBP22.73■■□□□ 1.23
COL13A1-208ENST00000479733 DAPK3O43293 454 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 KIRREL3Q8IZU9 778 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 MDM1Q8TC05 714 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 ANKS1AQ92625 1134 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 GJA10Q969M2 543 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 ATP8A2Q9NTI2 1148 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 AMACRQ9UHK6 382 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 PCDHGC5Q9Y5F6 944 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 NFS1Q9Y697 457 aa22.73■■□□□ 1.23
COL13A1-208ENST00000479733 RBAK-RBAKDNI3L0D1 243 aa22.72■■□□□ 1.23
COL13A1-208ENST00000479733 LRRC63Q05C16 580 aa22.72■■□□□ 1.23
COL13A1-208ENST00000479733 FAM228AQ86W67 206 aa22.72■■□□□ 1.23
COL13A1-208ENST00000479733 COL4A3BPQ9Y5P4 624 aa22.72■■□□□ 1.23
COL13A1-208ENST00000479733 STRCP1A6NGW2 1772 aa22.72■■□□□ 1.23
COL13A1-208ENST00000479733 NUP98P52948 1817 aa22.72■■□□□ 1.23
COL13A1-208ENST00000479733 GNAQP50148 359 aa22.72■■□□□ 1.23
COL13A1-208ENST00000479733 CACNB1Q02641 598 aaPredicted RBP22.72■■□□□ 1.23
COL13A1-208ENST00000479733 ANKRD20A8PQ5CZ79 823 aa22.72■■□□□ 1.23
COL13A1-208ENST00000479733 CADPS2Q86UW7 1296 aa22.72■■□□□ 1.23
COL13A1-208ENST00000479733 DGKHQ86XP1 1220 aa22.72■■□□□ 1.23
COL13A1-208ENST00000479733 CACNA2D3Q8IZS8 1091 aa22.72■■□□□ 1.23
COL13A1-208ENST00000479733 DAGLBQ8NCG7 672 aa22.72■■□□□ 1.23
COL13A1-208ENST00000479733 ITGA4P13612 1032 aa22.71■■□□□ 1.23
COL13A1-208ENST00000479733 KRT25Q7Z3Z0 450 aa22.71■■□□□ 1.23
COL13A1-208ENST00000479733 BANK1Q8NDB2 785 aa22.71■■□□□ 1.23
COL13A1-208ENST00000479733 DPH5Q9H2P9 285 aa22.71■■□□□ 1.23
COL13A1-208ENST00000479733 TPX2Q9ULW0 747 aaKnown RBP22.71■■□□□ 1.23
COL13A1-208ENST00000479733 ARAP2Q8WZ64 1704 aa22.71■■□□□ 1.23
COL13A1-208ENST00000479733 PPP2R2AP63151 447 aa22.71■■□□□ 1.23
COL13A1-208ENST00000479733 USP17L2Q6R6M4 530 aa22.71■■□□□ 1.23
COL13A1-208ENST00000479733 LRRC45Q96CN5 670 aa22.71■■□□□ 1.23
COL13A1-208ENST00000479733 FGFBP2Q9BYJ0 223 aa22.71■■□□□ 1.23
COL13A1-208ENST00000479733 PLCB4Q15147 1175 aa22.71■■□□□ 1.23
COL13A1-208ENST00000479733 CALCRLQ16602 461 aa22.71■■□□□ 1.23
COL13A1-208ENST00000479733 KRT71Q3SY84 523 aa22.71■■□□□ 1.23
COL13A1-208ENST00000479733 SOGA3Q5TF21 947 aa22.71■■□□□ 1.23
COL13A1-208ENST00000479733 SNX29Q8TEQ0 813 aa22.71■■□□□ 1.23
COL13A1-208ENST00000479733 TMEM47Q9BQJ4 181 aa22.71■■□□□ 1.23
COL13A1-208ENST00000479733 LRP5O75197 1615 aa22.7■■□□□ 1.22
COL13A1-208ENST00000479733 RPSAP08865 295 aaKnown RBP22.7■■□□□ 1.22
COL13A1-208ENST00000479733 ACTN1P12814 892 aa22.7■■□□□ 1.22
COL13A1-208ENST00000479733 SCTRP47872 440 aa22.7■■□□□ 1.22
COL13A1-208ENST00000479733 GALNT17Q6IS24 598 aa22.7■■□□□ 1.22
COL13A1-208ENST00000479733 MYOCDQ8IZQ8 938 aa22.7■■□□□ 1.22
COL13A1-208ENST00000479733 CELF4Q9BZC1 486 aaKnown RBP22.7■■□□□ 1.22
COL13A1-208ENST00000479733 ZMYND12Q9H0C1 365 aa22.7■■□□□ 1.22
COL13A1-208ENST00000479733 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.7■■□□□ 1.22
COL13A1-208ENST00000479733 EPS15P42566 896 aa22.7■■□□□ 1.22
COL13A1-208ENST00000479733 MMP14P50281 582 aa22.7■■□□□ 1.22
COL13A1-208ENST00000479733 ACTR5Q9H9F9 607 aaPredicted RBP22.7■■□□□ 1.22
COL13A1-208ENST00000479733 C6orf50Q9HD87 102 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms