RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 EIF6P56537 245 aaKnown RBP27.17■■□□□ 1.94
SYNGAP1-206ENST00000479510 GLIS3Q8NEA6 775 aa27.17■■□□□ 1.94
SYNGAP1-206ENST00000479510 USP40Q9NVE5 1235 aa27.17■■□□□ 1.94
SYNGAP1-206ENST00000479510 ATP6V0A2Q9Y487 856 aa27.17■■□□□ 1.94
SYNGAP1-206ENST00000479510 SF3B2Q13435 895 aaKnown RBP27.17■■□□□ 1.94
SYNGAP1-206ENST00000479510 TTBK2Q6IQ55 1244 aa27.17■■□□□ 1.94
SYNGAP1-206ENST00000479510 EMBQ6PCB8 327 aa27.17■■□□□ 1.94
SYNGAP1-206ENST00000479510 TLR10Q9BXR5 811 aa27.17■■□□□ 1.94
SYNGAP1-206ENST00000479510 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.17■■□□□ 1.94
SYNGAP1-206ENST00000479510 USP17L10C9JJH3 530 aa27.16■■□□□ 1.94
SYNGAP1-206ENST00000479510 PHACTR2O75167 634 aa27.16■■□□□ 1.94
SYNGAP1-206ENST00000479510 MYBL2P10244 700 aa27.16■■□□□ 1.94
SYNGAP1-206ENST00000479510 GFPT1Q06210 699 aaPredicted RBP27.16■■□□□ 1.94
SYNGAP1-206ENST00000479510 KCTD10Q9H3F6 313 aa27.16■■□□□ 1.94
SYNGAP1-206ENST00000479510 LRRC4BQ9NT99 713 aa27.16■■□□□ 1.94
SYNGAP1-206ENST00000479510 ATAD5Q96QE3 1844 aa27.16■■□□□ 1.94
SYNGAP1-206ENST00000479510 PPEF1O14829 653 aaPredicted RBP27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 SLC1A4P43007 532 aa27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 AP3B2Q13367 1082 aa27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 NFRKBQ6P4R8 1299 aa27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 DCAF4Q8WV16 495 aa27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 MKL1Q969V6 931 aa27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 AIPL1Q9NZN9 384 aa27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 MYH7BA7E2Y1 1941 aa27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 GOLGA6BA6NDN3 693 aa27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 EPHB4P54760 987 aa27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 RASSF7Q02833 373 aa27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 CFAP221Q4G0U5 840 aa27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 TDRD12Q587J7 1177 aaKnown RBP27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 KLHDC7AQ5VTJ3 777 aa27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 LRRC1Q9BTT6 524 aa27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 LSM14BQ9BX40 385 aaKnown RBP27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 STIM2Q9P246 746 aa27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 KIAA1024Q9UPX6 916 aa27.15■■□□□ 1.94
SYNGAP1-206ENST00000479510 ZMYND10O75800 440 aa27.14■■□□□ 1.94
SYNGAP1-206ENST00000479510 CYP11B2P19099 503 aa27.14■■□□□ 1.94
SYNGAP1-206ENST00000479510 GGCXP38435 758 aa27.14■■□□□ 1.94
SYNGAP1-206ENST00000479510 NNTQ13423 1086 aa27.14■■□□□ 1.94
SYNGAP1-206ENST00000479510 NAB2Q15742 525 aa27.14■■□□□ 1.94
SYNGAP1-206ENST00000479510 HAUS3Q68CZ6 603 aa27.14■■□□□ 1.94
SYNGAP1-206ENST00000479510 GPBP1Q86WP2 473 aa27.14■■□□□ 1.94
SYNGAP1-206ENST00000479510 CLEC10AQ8IUN9 316 aa27.14■■□□□ 1.94
SYNGAP1-206ENST00000479510 TBX3O15119 743 aa27.13■■□□□ 1.93
SYNGAP1-206ENST00000479510 TLR2O60603 784 aa27.13■■□□□ 1.93
SYNGAP1-206ENST00000479510 SLC18A3Q16572 532 aa27.13■■□□□ 1.93
SYNGAP1-206ENST00000479510 FAM182BQ5T319 152 aa27.13■■□□□ 1.93
SYNGAP1-206ENST00000479510 SCFD1Q8WVM8 642 aa27.13■■□□□ 1.93
SYNGAP1-206ENST00000479510 DRC1Q96MC2 740 aa27.13■■□□□ 1.93
SYNGAP1-206ENST00000479510 EMILIN3Q9NT22 766 aa27.13■■□□□ 1.93
SYNGAP1-206ENST00000479510 SALL4Q9UJQ4 1053 aa27.13■■□□□ 1.93
SYNGAP1-206ENST00000479510 GRID2IPA4D2P6 1211 aa27.13■■□□□ 1.93
SYNGAP1-206ENST00000479510 AGPSO00116 658 aa27.13■■□□□ 1.93
SYNGAP1-206ENST00000479510 SSBP05455 408 aaKnown RBP eCLIP27.13■■□□□ 1.93
SYNGAP1-206ENST00000479510 HERC4Q5GLZ8 1057 aaPredicted RBP27.13■■□□□ 1.93
SYNGAP1-206ENST00000479510 C10orf76Q5T2E6 689 aa27.13■■□□□ 1.93
SYNGAP1-206ENST00000479510 CERS5Q8N5B7 392 aa27.13■■□□□ 1.93
SYNGAP1-206ENST00000479510 CAVIN3Q969G5 261 aa27.13■■□□□ 1.93
SYNGAP1-206ENST00000479510 BTNL10A8MVZ5 291 aa27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 E9PMD0 336 aa27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 CETN3O15182 167 aa27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 IRX5P78411 483 aaPredicted RBP27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 ALS2CLQ60I27 953 aa27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 CDC42EP5Q6NZY7 148 aa27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 ERMNQ8TAM6 284 aa27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 ANO3Q9BYT9 981 aa27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 SLC16A2P36021 539 aa27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 POLR2FP61218 127 aaKnown RBP27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 ATP2B2Q01814 1243 aa27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 KCTD1Q719H9 257 aa27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 TEKT1Q969V4 418 aa27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 ZC3H12CQ9C0D7 883 aaKnown RBP27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 NLRC4Q9NPP4 1024 aa27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 NYAP2Q9P242 653 aa27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 DMGDHQ9UI17 866 aaKnown RBP27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 PCDHGC5Q9Y5F6 944 aa27.12■■□□□ 1.93
SYNGAP1-206ENST00000479510 ARFGEF1Q9Y6D6 1849 aa27.11■■□□□ 1.93
SYNGAP1-206ENST00000479510 POLRMTO00411 1230 aaKnown RBP27.11■■□□□ 1.93
SYNGAP1-206ENST00000479510 SLC12A3P55017 1021 aa27.11■■□□□ 1.93
SYNGAP1-206ENST00000479510 SLC20A2Q08357 652 aa27.11■■□□□ 1.93
SYNGAP1-206ENST00000479510 QRICH1Q2TAL8 776 aa27.11■■□□□ 1.93
SYNGAP1-206ENST00000479510 MYH4Q9Y623 1939 aa27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 OPA1O60313 960 aa27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 SHOX2O60902 331 aaPredicted RBP27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 DDR1Q08345 913 aa27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 SLC27A3Q5K4L6 730 aa27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 FRMD5Q7Z6J6 570 aa27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 KCTD17Q8N5Z5 321 aa27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 CRYGNQ8WXF5 182 aa27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 DHX36Q9H2U1 1008 aaKnown RBP27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 PLCB1Q9NQ66 1216 aa27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 PCDHA1Q9Y5I3 950 aa27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 ATP8B3O60423 1300 aa27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 POTEB3A0JP26 581 aa27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 POTECB2RU33 542 aa27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 GOLGA8KD6RF30 607 aa27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 MPHOSPH10O00566 681 aaKnown RBP27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 ANXA13P27216 316 aa27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 ADAM9Q13443 819 aa27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 C8orf74Q6P047 294 aa27.1■■□□□ 1.93
SYNGAP1-206ENST00000479510 POTEBQ6S5H4 581 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms